Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
EPHA8	2046	genome.wustl.edu	37	1	22902836	22902836	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCDC2B	149069	genome.wustl.edu	37	1	32681132	32681132	+	Silent	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A17	388662	genome.wustl.edu	37	1	110740769	110740769	+	Silent	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPRR2G	6706	genome.wustl.edu	37	1	153122469	153122469	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASTN1	460	genome.wustl.edu	37	1	176838004	176838004	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CR1	1378	genome.wustl.edu	37	1	207760830	207760830	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNK3	3777	genome.wustl.edu	37	2	26950552	26950552	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOS1	6654	genome.wustl.edu	37	2	39249914	39249914	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR1B	84172	genome.wustl.edu	37	2	113310279	113310279	+	Silent	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM168B	130074	genome.wustl.edu	37	2	131813155	131813155	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152409911	152409911	+	Splice_Site	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOXD10	3236	genome.wustl.edu	37	2	176982023	176982023	+	Silent	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR6	11180	genome.wustl.edu	37	3	49049335	49049335	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRYL	285527	genome.wustl.edu	37	4	48514651	48514651	+	Silent	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKG2	5593	genome.wustl.edu	37	4	82088325	82088325	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METTL14	57721	genome.wustl.edu	37	4	119626803	119626803	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB16	57717	genome.wustl.edu	37	5	140564414	140564414	+	Missense_Mutation	SNP	A	A	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMS1	22999	genome.wustl.edu	37	6	72678766	72678766	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGK1	6446	genome.wustl.edu	37	6	134495754	134495754	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SASH1	23328	genome.wustl.edu	37	6	148795300	148795300	+	Missense_Mutation	SNP	T	T	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf35	729515	genome.wustl.edu	37	6	157743748	157743748	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBRG4	9238	genome.wustl.edu	37	7	45141172	45141172	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMA3D	223117	genome.wustl.edu	37	7	84694809	84694809	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB1	5243	genome.wustl.edu	37	7	87179322	87179322	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAM22	53616	genome.wustl.edu	37	7	87780312	87780312	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM33	155435	genome.wustl.edu	37	7	155532606	155532606	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANK1	286	genome.wustl.edu	37	8	41519305	41519305	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF572	137209	genome.wustl.edu	37	8	125989971	125989971	+	Silent	SNP	G	G	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC442421	442421	genome.wustl.edu	37	9	66499739	66499739	+	RNA	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112686028	112686028	+	Missense_Mutation	SNP	A	A	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGR2	1959	genome.wustl.edu	37	10	64573185	64573185	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCD	6319	genome.wustl.edu	37	10	102116383	102116383	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM175B	23172	genome.wustl.edu	37	10	126523239	126523239	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAG2	5897	genome.wustl.edu	37	11	36614556	36614556	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDON	50937	genome.wustl.edu	37	11	125873964	125873964	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C13orf33	84935	genome.wustl.edu	37	13	31495824	31495824	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RDH11	51109	genome.wustl.edu	37	14	68159684	68159684	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR68	8111	genome.wustl.edu	37	14	91700874	91700874	+	Missense_Mutation	SNP	T	T	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF609	23060	genome.wustl.edu	37	15	64792056	64792056	+	Silent	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD11	29123	genome.wustl.edu	37	16	89349633	89349633	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC47A2	146802	genome.wustl.edu	37	17	19582183	19582183	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF213	57674	genome.wustl.edu	37	17	78321264	78321264	+	Silent	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000005206	0	genome.wustl.edu	37	19	2344611	2344611	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIAS4	51588	genome.wustl.edu	37	19	4013087	4013087	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288184	100288184	genome.wustl.edu	37	19	19153562	19153562	+	Silent	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AXL	558	genome.wustl.edu	37	19	41736912	41736912	+	Silent	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf177	63939	genome.wustl.edu	37	20	58519160	58519160	+	Silent	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBLN1	2192	genome.wustl.edu	37	22	45914634	45914634	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	655	655	+	RNA	SNP	T	T	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATRX	546	genome.wustl.edu	37	X	76937521	76937521	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH11X	27328	genome.wustl.edu	37	X	91132565	91132565	+	Silent	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THOC2	57187	genome.wustl.edu	37	X	122866806	122866806	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSR4	6748	genome.wustl.edu	37	X	153062922	153062922	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MNDA	4332	genome.wustl.edu	37	1	158815481	158815481	+	Silent	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WSCD2	9671	genome.wustl.edu	37	12	108589647	108589647	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGFR2	2263	genome.wustl.edu	37	10	123279677	123279677	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717672	89717672	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUNX2	860	genome.wustl.edu	37	6	45514918	45514919	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EP300	2033	genome.wustl.edu	37	22	41513277	41513277	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A0RY-01	TCGA-BG-A0RY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
