Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CROCC	9696	genome.wustl.edu	37	1	17297200	17297200	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM159A	348378	genome.wustl.edu	37	1	53122511	53122511	+	Silent	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMPD1	270	genome.wustl.edu	37	1	115220124	115220124	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R5A	5525	genome.wustl.edu	37	1	212530627	212530627	+	Splice_Site	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH2A	7399	genome.wustl.edu	37	1	216052241	216052241	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR5	7100	genome.wustl.edu	37	1	223286142	223286142	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRTM4	80059	genome.wustl.edu	37	2	76975863	76975863	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBLN2	2199	genome.wustl.edu	37	3	13613054	13613054	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266097	41266097	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITIH4	3700	genome.wustl.edu	37	3	52852195	52852195	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5AC2	81050	genome.wustl.edu	37	3	97806342	97806342	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSC22D2	9819	genome.wustl.edu	37	3	150176210	150176210	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADH1A	124	genome.wustl.edu	37	4	100205875	100205875	+	Silent	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB5	26167	genome.wustl.edu	37	5	140515039	140515039	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA7	56108	genome.wustl.edu	37	5	140762918	140762918	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPLX2	10814	genome.wustl.edu	37	5	175307104	175307104	+	Silent	SNP	T	T	G			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131608	100131608	genome.wustl.edu	37	8	7404340	7404340	+	Missense_Mutation	SNP	A	A	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRNB3	1142	genome.wustl.edu	37	8	42586852	42586852	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM2	23670	genome.wustl.edu	37	9	74313084	74313084	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPYSL4	10570	genome.wustl.edu	37	10	134016262	134016262	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51Q1	390061	genome.wustl.edu	37	11	5443623	5443623	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDUFS8	4728	genome.wustl.edu	37	11	67803940	67803940	+	Missense_Mutation	SNP	T	T	G			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIP1	23426	genome.wustl.edu	37	12	66800108	66800108	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRQ	374462	genome.wustl.edu	37	12	80935596	80935596	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABHD4	63874	genome.wustl.edu	37	14	23070609	23070609	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOMER2	9455	genome.wustl.edu	37	15	83544109	83544109	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C16orf91	283951	genome.wustl.edu	37	16	1469996	1469996	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEPT12	124404	genome.wustl.edu	37	16	4829717	4829717	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACSM1	116285	genome.wustl.edu	37	16	20648698	20648698	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMTNL2	342527	genome.wustl.edu	37	17	4496467	4496467	+	Splice_Site	SNP	G	G	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLD2	5338	genome.wustl.edu	37	17	4721857	4721857	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RLN3	117579	genome.wustl.edu	37	19	14141676	14141676	+	Silent	SNP	G	G	C			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APP	351	genome.wustl.edu	37	21	27269929	27269929	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644165	644165	genome.wustl.edu	37	22	25029407	25029407	+	RNA	SNP	G	G	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARSH	347527	genome.wustl.edu	37	X	2933044	2933044	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OGT	8473	genome.wustl.edu	37	X	70775930	70775930	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACRC	93953	genome.wustl.edu	37	X	70823595	70823595	+	Silent	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP36	158763	genome.wustl.edu	37	X	130217929	130217929	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM72A	729533	genome.wustl.edu	37	1	206141509	206141509	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC4	64101	genome.wustl.edu	37	7	127669971	127669971	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNC1	3746	genome.wustl.edu	37	11	17757767	17757767	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K11	4296	genome.wustl.edu	37	11	65366882	65366882	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RFX1	5989	genome.wustl.edu	37	19	14074787	14074787	+	Silent	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP33	115703	genome.wustl.edu	37	19	36275204	36275204	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRF2BP1	26145	genome.wustl.edu	37	19	46387941	46387941	+	Silent	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHCY	191	genome.wustl.edu	37	20	32878605	32878605	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210082	0	genome.wustl.edu	37	MT	3155	3155	+	RNA	SNP	C	C	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198899	0	genome.wustl.edu	37	MT	9196	9196	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOXF1	158800	genome.wustl.edu	37	X	119249401	119249401	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289580	100289580	genome.wustl.edu	37	16	88804925	88804925	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROCA1	147011	genome.wustl.edu	37	17	27038587	27038587	+	Splice_Site	DEL	C	C	-			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD6	84181	genome.wustl.edu	37	20	40118655	40118656	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A0W2-01	TCGA-BG-A0W2-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
