Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CPSF3L	54973	genome.wustl.edu	37	1	1250899	1250899	+	Splice_Site	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC11	55735	genome.wustl.edu	37	1	6712895	6712895	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf187	374946	genome.wustl.edu	37	1	11769428	11769428	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDPN	10630	genome.wustl.edu	37	1	13933760	13933760	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLA2G2F	64600	genome.wustl.edu	37	1	20471142	20471142	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA8	2046	genome.wustl.edu	37	1	22903062	22903062	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27057961	27057961	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDTC1	23038	genome.wustl.edu	37	1	27589701	27589701	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR3	2827	genome.wustl.edu	37	1	27720774	27720774	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B4GALT2	8704	genome.wustl.edu	37	1	44451218	44451218	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSBP3	23648	genome.wustl.edu	37	1	54707175	54707175	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf168	199920	genome.wustl.edu	37	1	57216870	57216870	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTGFR	5737	genome.wustl.edu	37	1	78963629	78963629	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP29	9411	genome.wustl.edu	37	1	94668248	94668248	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMIGO1	57463	genome.wustl.edu	37	1	110051211	110051211	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MOV10	4343	genome.wustl.edu	37	1	113217559	113217559	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD160	11126	genome.wustl.edu	37	1	145704046	145704046	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POGZ	23126	genome.wustl.edu	37	1	151397495	151397495	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCHH	7062	genome.wustl.edu	37	1	152081442	152081442	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCHH	7062	genome.wustl.edu	37	1	152081705	152081705	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HRNR	388697	genome.wustl.edu	37	1	152192121	152192121	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM189B	10712	genome.wustl.edu	37	1	155218265	155218265	+	Splice_Site	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMG5	23381	genome.wustl.edu	37	1	156238080	156238080	+	Splice_Site	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A4	480	genome.wustl.edu	37	1	160141394	160141394	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD84	8832	genome.wustl.edu	37	1	160519728	160519728	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729952	729952	genome.wustl.edu	37	1	164326102	164326102	+	RNA	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH9A1	223	genome.wustl.edu	37	1	165649814	165649814	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM5B	57795	genome.wustl.edu	37	1	177250475	177250475	+	Silent	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1614	57710	genome.wustl.edu	37	1	180885602	180885602	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC647150	647150	genome.wustl.edu	37	1	192216138	192216138	+	RNA	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CFHR2	3080	genome.wustl.edu	37	1	196918738	196918738	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR37L1	9283	genome.wustl.edu	37	1	202097567	202097567	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPFIA4	8497	genome.wustl.edu	37	1	203024597	203024597	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAX1	54900	genome.wustl.edu	37	1	203740521	203740521	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIGR	5284	genome.wustl.edu	37	1	207109015	207109015	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf116	79098	genome.wustl.edu	37	1	207195412	207195412	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM63A	9725	genome.wustl.edu	37	1	226044713	226044713	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIN9	286826	genome.wustl.edu	37	1	226453982	226453982	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM67	440730	genome.wustl.edu	37	1	231344710	231344710	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYST	1130	genome.wustl.edu	37	1	235920622	235920622	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR113	165082	genome.wustl.edu	37	2	26534622	26534622	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAD	790	genome.wustl.edu	37	2	27449066	27449066	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPRED2	200734	genome.wustl.edu	37	2	65561814	65561814	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNO1	56902	genome.wustl.edu	37	2	68389401	68389401	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKP4	8502	genome.wustl.edu	37	2	159481462	159481462	+	Missense_Mutation	SNP	A	A	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1I2	1781	genome.wustl.edu	37	2	172546703	172546703	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1I2	1781	genome.wustl.edu	37	2	172563806	172563806	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAPGEF4	11069	genome.wustl.edu	37	2	173853440	173853440	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTX2	10651	genome.wustl.edu	37	2	177193631	177193631	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FZD7	8324	genome.wustl.edu	37	2	202900316	202900316	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645978	645978	genome.wustl.edu	37	2	207274920	207274920	+	RNA	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL4	9654	genome.wustl.edu	37	2	219602910	219602910	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM134A	79137	genome.wustl.edu	37	2	220047058	220047058	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCN4	55515	genome.wustl.edu	37	2	220396552	220396552	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PID1	55022	genome.wustl.edu	37	2	229890504	229890504	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SP140	11262	genome.wustl.edu	37	2	231159016	231159016	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GIGYF2	26058	genome.wustl.edu	37	2	233708929	233708929	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6B2	389090	genome.wustl.edu	37	2	240969689	240969689	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGXT	189	genome.wustl.edu	37	2	241818207	241818207	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PASK	23178	genome.wustl.edu	37	2	242063393	242063393	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PASK	23178	genome.wustl.edu	37	2	242066758	242066758	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIP2	80852	genome.wustl.edu	37	3	14545084	14545084	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NGLY1	55768	genome.wustl.edu	37	3	25777495	25777495	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DZIP3	9666	genome.wustl.edu	37	3	108381042	108381042	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC13	23317	genome.wustl.edu	37	3	132203338	132203338	+	Splice_Site	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KY	339855	genome.wustl.edu	37	3	134322879	134322879	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESYT3	83850	genome.wustl.edu	37	3	138191325	138191325	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178928297	178928297	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RTP4	64108	genome.wustl.edu	37	3	187086321	187086321	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC26A1	10861	genome.wustl.edu	37	4	982726	982726	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFAP1	60312	genome.wustl.edu	37	4	7774681	7774681	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL8	57563	genome.wustl.edu	37	4	88104381	88104381	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDST4	64579	genome.wustl.edu	37	4	115792022	115792022	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D9	23158	genome.wustl.edu	37	4	141578311	141578311	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FREM3	166752	genome.wustl.edu	37	4	144621353	144621353	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC29	83894	genome.wustl.edu	37	4	147830370	147830370	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP10	79658	genome.wustl.edu	37	4	148886229	148886229	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM75	391714	genome.wustl.edu	37	4	165981667	165981667	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187517848	187517848	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIML1	339976	genome.wustl.edu	37	4	189063480	189063480	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FASTKD3	79072	genome.wustl.edu	37	5	7867808	7867808	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDZD2	23037	genome.wustl.edu	37	5	32053973	32053973	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEF2	79925	genome.wustl.edu	37	5	35641649	35641649	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591106	67591106	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCCC2	64087	genome.wustl.edu	37	5	70900248	70900248	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BHMT2	23743	genome.wustl.edu	37	5	78379053	78379053	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAN2A1	4124	genome.wustl.edu	37	5	109117235	109117235	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX2	6643	genome.wustl.edu	37	5	122153039	122153039	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEGF10	84466	genome.wustl.edu	37	5	126771171	126771171	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA11	56138	genome.wustl.edu	37	5	140250348	140250348	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK2	1794	genome.wustl.edu	37	5	169468087	169468087	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf25	375484	genome.wustl.edu	37	5	175716731	175716731	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARL10	285598	genome.wustl.edu	37	5	175793474	175793474	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NSD1	64324	genome.wustl.edu	37	5	176720989	176720989	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000170089	0	genome.wustl.edu	37	5	177309754	177309754	+	Splice_Site	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF4B	8899	genome.wustl.edu	37	6	4042759	4042759	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RREB1	6239	genome.wustl.edu	37	6	7246811	7246811	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIVEP1	3096	genome.wustl.edu	37	6	12161723	12161723	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM38	10475	genome.wustl.edu	37	6	25967119	25967119	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H4F	8361	genome.wustl.edu	37	6	26240939	26240939	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAAM2	23500	genome.wustl.edu	37	6	39864593	39864593	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IBTK	25998	genome.wustl.edu	37	6	82949978	82949978	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LACE1	246269	genome.wustl.edu	37	6	108676912	108676912	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THEMIS	387357	genome.wustl.edu	37	6	128150751	128150751	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1244	57221	genome.wustl.edu	37	6	138644865	138644865	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EZR	7430	genome.wustl.edu	37	6	159190425	159190425	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGPAT4	56895	genome.wustl.edu	37	6	161575308	161575308	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FERD3L	222894	genome.wustl.edu	37	7	19184847	19184847	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB5	340273	genome.wustl.edu	37	7	20721129	20721129	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIBADH	11112	genome.wustl.edu	37	7	27669062	27669062	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCRN1	9805	genome.wustl.edu	37	7	29983772	29983772	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECW1	23072	genome.wustl.edu	37	7	43351657	43351657	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKIB1	54467	genome.wustl.edu	37	7	91936716	91936716	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGCE	8910	genome.wustl.edu	37	7	94229973	94229973	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEPCE	56257	genome.wustl.edu	37	7	100031137	100031137	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUX1	1523	genome.wustl.edu	37	7	101882719	101882719	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RELN	5649	genome.wustl.edu	37	7	103143535	103143535	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAMPT	10135	genome.wustl.edu	37	7	105891602	105891602	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM168	64418	genome.wustl.edu	37	7	112407529	112407529	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRF5	3663	genome.wustl.edu	37	7	128587312	128587312	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNPO3	23534	genome.wustl.edu	37	7	128633943	128633943	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C7orf49	78996	genome.wustl.edu	37	7	134851582	134851582	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAS2R4	50832	genome.wustl.edu	37	7	141478715	141478715	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRBV3-1	28619	genome.wustl.edu	37	7	142008629	142008629	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF862	643641	genome.wustl.edu	37	7	149547316	149547316	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAXIP1	22976	genome.wustl.edu	37	7	154775001	154775001	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBE3C	9690	genome.wustl.edu	37	7	157046958	157046958	+	Missense_Mutation	SNP	A	A	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLGAP2	9228	genome.wustl.edu	37	8	1616660	1616660	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35G5	83650	genome.wustl.edu	37	8	11189198	11189198	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000245281	0	genome.wustl.edu	37	8	17944408	17944408	+	RNA	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMP1	649	genome.wustl.edu	37	8	22066975	22066975	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX15	56154	genome.wustl.edu	37	8	30703276	30703276	+	Silent	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOT1L1	137362	genome.wustl.edu	37	8	37794491	37794491	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POTEA	340441	genome.wustl.edu	37	8	43147653	43147653	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RALYL	138046	genome.wustl.edu	37	8	85774589	85774589	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSPYL5	85453	genome.wustl.edu	37	8	98288864	98288864	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKHD1L1	93035	genome.wustl.edu	37	8	110460447	110460447	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	113585871	113585871	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAPPC9	83696	genome.wustl.edu	37	8	140744251	140744251	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP11B2	1585	genome.wustl.edu	37	8	143994295	143994295	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYCRL	65263	genome.wustl.edu	37	8	144687931	144687931	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMRT3	58524	genome.wustl.edu	37	9	990202	990202	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZCCHC7	84186	genome.wustl.edu	37	9	37354783	37354783	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642943	642943	genome.wustl.edu	37	9	95648866	95648866	+	RNA	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL15A1	1306	genome.wustl.edu	37	9	101706499	101706499	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDOB	229	genome.wustl.edu	37	9	104193145	104193145	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf125	84302	genome.wustl.edu	37	9	104238408	104238408	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf125	84302	genome.wustl.edu	37	9	104238630	104238630	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF462	58499	genome.wustl.edu	37	9	109690781	109690781	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112899875	112899875	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF4	9128	genome.wustl.edu	37	9	116053878	116053878	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF19	26147	genome.wustl.edu	37	9	123629233	123629233	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC2A8	29988	genome.wustl.edu	37	9	130166034	130166034	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247421	0	genome.wustl.edu	37	9	132872549	132872549	+	RNA	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUBP3	8939	genome.wustl.edu	37	9	133491782	133491782	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM69B	138311	genome.wustl.edu	37	9	139617828	139617828	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000244769	0	genome.wustl.edu	37	9	140119970	140119970	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF22	7570	genome.wustl.edu	37	10	45498918	45498918	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHAT	1103	genome.wustl.edu	37	10	50854705	50854705	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGR2	1959	genome.wustl.edu	37	10	64575710	64575710	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCAR1	55749	genome.wustl.edu	37	10	70547774	70547774	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AP3M1	26985	genome.wustl.edu	37	10	75893908	75893908	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D12	23232	genome.wustl.edu	37	10	96292805	96292805	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGF8	2253	genome.wustl.edu	37	10	103534517	103534517	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR96	80217	genome.wustl.edu	37	10	105905300	105905300	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF511	118472	genome.wustl.edu	37	10	135125300	135125300	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM68	55128	genome.wustl.edu	37	11	4621922	4621922	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51B6	390058	genome.wustl.edu	37	11	5373352	5373352	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2AG1	144125	genome.wustl.edu	37	11	6806486	6806486	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM86A	144110	genome.wustl.edu	37	11	18723399	18723399	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3M	10480	genome.wustl.edu	37	11	32611116	32611116	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSD17B12	51144	genome.wustl.edu	37	11	43861580	43861580	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRY2	1408	genome.wustl.edu	37	11	45869075	45869075	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG13	9776	genome.wustl.edu	37	11	46691065	46691065	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MADD	8567	genome.wustl.edu	37	11	47317528	47317528	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOSL1	8061	genome.wustl.edu	37	11	65664342	65664342	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM4B	83759	genome.wustl.edu	37	11	66436693	66436693	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSTP1	2950	genome.wustl.edu	37	11	67353976	67353976	+	Silent	SNP	G	G	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTTN	2017	genome.wustl.edu	37	11	70263163	70263163	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRTOMT	220074	genome.wustl.edu	37	11	71819808	71819808	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGAT2	84649	genome.wustl.edu	37	11	75509447	75509447	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC399942	399942	genome.wustl.edu	37	11	90015797	90015797	+	RNA	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFRKB	4798	genome.wustl.edu	37	11	129742893	129742893	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFRKB	4798	genome.wustl.edu	37	11	129743892	129743892	+	Silent	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA2D4	93589	genome.wustl.edu	37	12	2022212	2022212	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUSP16	80824	genome.wustl.edu	37	12	12630318	12630318	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIN2B	2904	genome.wustl.edu	37	12	13768202	13768202	+	Splice_Site	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RACGAP1P	83956	genome.wustl.edu	37	12	45457834	45457834	+	RNA	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL2	8085	genome.wustl.edu	37	12	49446070	49446070	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMNL3	91010	genome.wustl.edu	37	12	50052241	50052241	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMPRSS12	283471	genome.wustl.edu	37	12	51237683	51237683	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT85	3891	genome.wustl.edu	37	12	52760856	52760856	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOAT2	8435	genome.wustl.edu	37	12	53509369	53509369	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERBB3	2065	genome.wustl.edu	37	12	56494022	56494022	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAT2	6773	genome.wustl.edu	37	12	56749234	56749234	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57567739	57567739	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRB	5787	genome.wustl.edu	37	12	70970310	70970310	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R12A	4659	genome.wustl.edu	37	12	80190656	80190656	+	Missense_Mutation	SNP	A	A	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIN7A	8825	genome.wustl.edu	37	12	81283079	81283079	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMPO	7112	genome.wustl.edu	37	12	98927726	98927726	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KL	9365	genome.wustl.edu	37	13	33635027	33635027	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM48A	55578	genome.wustl.edu	37	13	37622055	37622055	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITM2B	9445	genome.wustl.edu	37	13	48830407	48830407	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLF5	688	genome.wustl.edu	37	13	73636518	73636518	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643677	643677	genome.wustl.edu	37	13	103395416	103395416	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB20	55647	genome.wustl.edu	37	13	111176303	111176303	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SALL2	6297	genome.wustl.edu	37	14	21991633	21991633	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH6	4624	genome.wustl.edu	37	14	23853909	23853909	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP6	9472	genome.wustl.edu	37	14	33291067	33291067	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL28	54813	genome.wustl.edu	37	14	45403545	45403545	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440181	440181	genome.wustl.edu	37	14	59294970	59294970	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP128	145508	genome.wustl.edu	37	14	81259399	81259399	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000216173	0	genome.wustl.edu	37	14	99828701	99828701	+	RNA	SNP	A	A	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK2	113146	genome.wustl.edu	37	14	105406373	105406373	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132101	100132101	genome.wustl.edu	37	15	23388453	23388453	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2	8924	genome.wustl.edu	37	15	28502228	28502228	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000221138	0	genome.wustl.edu	37	15	33256249	33256249	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GJD2	57369	genome.wustl.edu	37	15	35045218	35045218	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBS1	7057	genome.wustl.edu	37	15	39881287	39881287	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C15orf52	388115	genome.wustl.edu	37	15	40629609	40629609	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC17	55192	genome.wustl.edu	37	15	41067243	41067243	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYRO3	7301	genome.wustl.edu	37	15	41863264	41863264	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MNS1	55329	genome.wustl.edu	37	15	56735642	56735642	+	Nonsense_Mutation	SNP	T	T	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLN2	83660	genome.wustl.edu	37	15	62967479	62967479	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAPK2	23604	genome.wustl.edu	37	15	64218226	64218226	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEXA	3073	genome.wustl.edu	37	15	72647903	72647903	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000227593	0	genome.wustl.edu	37	15	72743322	72743322	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC400406	400406	genome.wustl.edu	37	15	78278585	78278585	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C15orf42	90381	genome.wustl.edu	37	15	90167181	90167181	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF7	374654	genome.wustl.edu	37	15	90193017	90193017	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANPEP	290	genome.wustl.edu	37	15	90344733	90344733	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQGAP1	8826	genome.wustl.edu	37	15	91030271	91030271	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRK1	79705	genome.wustl.edu	37	15	101567917	101567917	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CREBBP	1387	genome.wustl.edu	37	16	3789648	3789648	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC342346	342346	genome.wustl.edu	37	16	4644725	4644725	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKS3	124401	genome.wustl.edu	37	16	4748887	4748887	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC16A	23274	genome.wustl.edu	37	16	11114095	11114095	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EEF2K	29904	genome.wustl.edu	37	16	22256035	22256035	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP31	57478	genome.wustl.edu	37	16	23080434	23080434	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKCB	5579	genome.wustl.edu	37	16	24046789	24046789	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL4R	3566	genome.wustl.edu	37	16	27375004	27375004	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF48	197407	genome.wustl.edu	37	16	30409518	30409518	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF688	146542	genome.wustl.edu	37	16	30581442	30581442	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETD1A	9739	genome.wustl.edu	37	16	30995246	30995246	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGAX	3687	genome.wustl.edu	37	16	31384645	31384645	+	Silent	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYLK3	91807	genome.wustl.edu	37	16	46741651	46741651	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CETP	1071	genome.wustl.edu	37	16	57017280	57017280	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1LI2	1783	genome.wustl.edu	37	16	66768206	66768206	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWP2	11060	genome.wustl.edu	37	16	69971461	69971461	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST6	4166	genome.wustl.edu	37	16	75513474	75513474	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWOX	51741	genome.wustl.edu	37	16	78420792	78420792	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MVD	4597	genome.wustl.edu	37	16	88722097	88722097	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD11	29123	genome.wustl.edu	37	16	89352480	89352480	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPG7	6687	genome.wustl.edu	37	16	89592801	89592801	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100290070	100290070	genome.wustl.edu	37	17	139251	139251	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASPA	443	genome.wustl.edu	37	17	3386871	3386871	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
YBX2	51087	genome.wustl.edu	37	17	7193824	7193824	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH3	4621	genome.wustl.edu	37	17	10545571	10545571	+	Missense_Mutation	SNP	A	A	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HS3ST3A1	9955	genome.wustl.edu	37	17	13399926	13399926	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HS3ST3B1	9953	genome.wustl.edu	37	17	14248554	14248554	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LLGL1	3996	genome.wustl.edu	37	17	18145300	18145300	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO18A	399687	genome.wustl.edu	37	17	27493916	27493916	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPD	1362	genome.wustl.edu	37	17	28766007	28766007	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB11FIP4	84440	genome.wustl.edu	37	17	29850544	29850544	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000226049	0	genome.wustl.edu	37	17	32364844	32364844	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT27	342574	genome.wustl.edu	37	17	38938537	38938537	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP4-6	81871	genome.wustl.edu	37	17	39296318	39296318	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT37	8688	genome.wustl.edu	37	17	39578397	39578397	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL10	317719	genome.wustl.edu	37	17	40004386	40004386	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGF2BP1	10642	genome.wustl.edu	37	17	47121355	47121355	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSAD1	55316	genome.wustl.edu	37	17	48559701	48559701	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288505	100288505	genome.wustl.edu	37	17	48616369	48616369	+	Splice_Site	SNP	C	C	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AXIN2	8313	genome.wustl.edu	37	17	63554353	63554353	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC42EP4	23580	genome.wustl.edu	37	17	71282585	71282585	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTBD17	388419	genome.wustl.edu	37	17	72352855	72352855	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIN2C	2905	genome.wustl.edu	37	17	72846813	72846813	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH17	8632	genome.wustl.edu	37	17	76567795	76567795	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYCR1	5831	genome.wustl.edu	37	17	79893235	79893235	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF750	79755	genome.wustl.edu	37	17	80789425	80789425	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFP161	7541	genome.wustl.edu	37	18	5291353	5291353	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF397	84307	genome.wustl.edu	37	18	32825965	32825965	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF236	7776	genome.wustl.edu	37	18	74624253	74624253	+	Silent	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBP	4155	genome.wustl.edu	37	18	74700437	74700437	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEX3D	399664	genome.wustl.edu	37	19	1555357	1555357	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIP5K1C	23396	genome.wustl.edu	37	19	3643358	3643358	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLIN5	440503	genome.wustl.edu	37	19	4529195	4529195	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB	6294	genome.wustl.edu	37	19	5667374	5667374	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf70	125988	genome.wustl.edu	37	19	5679374	5679374	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC16	94025	genome.wustl.edu	37	19	9068021	9068021	+	Silent	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF699	374879	genome.wustl.edu	37	19	9408633	9408633	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF812	729648	genome.wustl.edu	37	19	9800989	9800989	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KEAP1	9817	genome.wustl.edu	37	19	10610218	10610218	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKN2D	1032	genome.wustl.edu	37	19	10677762	10677762	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCA4	6597	genome.wustl.edu	37	19	11169489	11169489	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK6	57572	genome.wustl.edu	37	19	11333750	11333750	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF653	115950	genome.wustl.edu	37	19	11597847	11597847	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANO8	57719	genome.wustl.edu	37	19	17436068	17436068	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ISYNA1	51477	genome.wustl.edu	37	19	18545801	18545801	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FFAR1	2864	genome.wustl.edu	37	19	35843061	35843061	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf47	126526	genome.wustl.edu	37	19	40832279	40832279	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2A6	1548	genome.wustl.edu	37	19	41350661	41350661	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMPK	1760	genome.wustl.edu	37	19	46280959	46280959	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMWD	1762	genome.wustl.edu	37	19	46289926	46289926	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LMTK3	114783	genome.wustl.edu	37	19	49001749	49001749	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUT2	2524	genome.wustl.edu	37	19	49206444	49206444	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPM4	54795	genome.wustl.edu	37	19	49703643	49703643	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LILRA2	11027	genome.wustl.edu	37	19	55086931	55086931	+	Silent	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R12C	54776	genome.wustl.edu	37	19	55624037	55624037	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf202	400831	genome.wustl.edu	37	20	1184201	1184201	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPXM1	56265	genome.wustl.edu	37	20	2777926	2777926	+	Silent	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XRN2	22803	genome.wustl.edu	37	20	21327149	21327149	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WFDC2	10406	genome.wustl.edu	37	20	44098458	44098458	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAS1	8537	genome.wustl.edu	37	20	52644881	52644881	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLCO4A1	28231	genome.wustl.edu	37	20	61297807	61297807	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTN1	26046	genome.wustl.edu	37	21	30315604	30315604	+	Missense_Mutation	SNP	A	A	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
URB1	9875	genome.wustl.edu	37	21	33723030	33723030	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUNX1	861	genome.wustl.edu	37	21	36206817	36206817	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBS	875	genome.wustl.edu	37	21	44486442	44486442	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GGT1	2678	genome.wustl.edu	37	22	25019114	25019114	+	Silent	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MN1	4330	genome.wustl.edu	37	22	28193931	28193931	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXO7	25793	genome.wustl.edu	37	22	32889178	32889178	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH9	4627	genome.wustl.edu	37	22	36702647	36702647	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMPRSS6	164656	genome.wustl.edu	37	22	37462131	37462131	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF21B	112885	genome.wustl.edu	37	22	45316294	45316294	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD1	23774	genome.wustl.edu	37	22	50187832	50187832	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCAPH2	29781	genome.wustl.edu	37	22	50956675	50956675	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR7	51284	genome.wustl.edu	37	X	12906271	12906271	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM47B	170062	genome.wustl.edu	37	X	34962542	34962542	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPGR	6103	genome.wustl.edu	37	X	38145180	38145180	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSX9	280660	genome.wustl.edu	37	X	48163101	48163101	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHROOM4	57477	genome.wustl.edu	37	X	50376425	50376425	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAAH2	158584	genome.wustl.edu	37	X	57313277	57313277	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MSN	4478	genome.wustl.edu	37	X	64959710	64959710	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL2RG	3561	genome.wustl.edu	37	X	70329192	70329192	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED12	9968	genome.wustl.edu	37	X	70348505	70348505	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TGIF2LX	90316	genome.wustl.edu	37	X	89177504	89177504	+	Silent	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMCX2	9823	genome.wustl.edu	37	X	100911501	100911501	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPRASP2	114928	genome.wustl.edu	37	X	101971348	101971348	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NGFRAP1	27018	genome.wustl.edu	37	X	102632699	102632699	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAPN6	827	genome.wustl.edu	37	X	110491215	110491215	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB33	10009	genome.wustl.edu	37	X	119388865	119388865	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBNL3	55796	genome.wustl.edu	37	X	131540408	131540408	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM127A	8933	genome.wustl.edu	37	X	134166545	134166545	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR50	9248	genome.wustl.edu	37	X	150349120	150349120	+	Silent	SNP	T	T	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLNA	2316	genome.wustl.edu	37	X	153590879	153590879	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VBP1	7411	genome.wustl.edu	37	X	154444817	154444817	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM132A	388581	genome.wustl.edu	37	1	1179361	1179361	+	Silent	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9	57549	genome.wustl.edu	37	1	159900547	159900547	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249227	0	genome.wustl.edu	37	1	202593247	202593247	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132215	100132215	genome.wustl.edu	37	2	63272467	63272467	+	RNA	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRK7	131890	genome.wustl.edu	37	3	141497445	141497445	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC4	4585	genome.wustl.edu	37	3	195512122	195512122	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R5D	5528	genome.wustl.edu	37	6	42978373	42978373	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRT4	401399	genome.wustl.edu	37	7	127999678	127999678	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249665	0	genome.wustl.edu	37	8	86786357	86786357	+	RNA	SNP	C	C	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL22A1	169044	genome.wustl.edu	37	8	139890128	139890128	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R3C	5507	genome.wustl.edu	37	10	93390251	93390251	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWCE	220001	genome.wustl.edu	37	11	61026349	61026349	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSCAML1	57453	genome.wustl.edu	37	11	117299166	117299166	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID2	196528	genome.wustl.edu	37	12	46231329	46231329	+	Nonsense_Mutation	SNP	T	T	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA6B	55889	genome.wustl.edu	37	15	72958134	72958134	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FADS6	283985	genome.wustl.edu	37	17	72889586	72889586	+	Silent	SNP	G	G	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717672	89717672	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTHFR	4524	genome.wustl.edu	37	1	11863231	11863231	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCN6	1185	genome.wustl.edu	37	1	11893605	11893605	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSSK3	81629	genome.wustl.edu	37	1	32829614	32829615	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGM1	5236	genome.wustl.edu	37	1	64120131	64120131	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST2H2AC	8338	genome.wustl.edu	37	1	149858869	149858870	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTSL4	54507	genome.wustl.edu	37	1	150530506	150530506	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000234010	0	genome.wustl.edu	37	1	153896080	153896080	+	RNA	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A4	480	genome.wustl.edu	37	1	160124893	160124893	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf192	257177	genome.wustl.edu	37	1	161335437	161335437	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNASEL	6041	genome.wustl.edu	37	1	182545526	182545527	+	Splice_Site	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SWT1	54823	genome.wustl.edu	37	1	185143815	185143816	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASPM	259266	genome.wustl.edu	37	1	197108900	197108900	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM17	51127	genome.wustl.edu	37	1	228596779	228596779	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PXDN	7837	genome.wustl.edu	37	2	1652960	1652960	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAP2	8853	genome.wustl.edu	37	2	9540926	9540927	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FEZ2	9637	genome.wustl.edu	37	2	36785621	36785622	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD20A8P	729171	genome.wustl.edu	37	2	95483039	95483039	+	RNA	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO7B	4648	genome.wustl.edu	37	2	128339957	128339957	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179527716	179527716	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179606060	179606060	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA12	26154	genome.wustl.edu	37	2	215834997	215834998	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP5D	3635	genome.wustl.edu	37	2	234072359	234072359	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGT1A3	54659	genome.wustl.edu	37	2	234638283	234638283	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM44	375316	genome.wustl.edu	37	2	238725989	238725990	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB5A	5868	genome.wustl.edu	37	3	19992550	19992550	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBP1	7342	genome.wustl.edu	37	3	33441722	33441722	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKTR	4820	genome.wustl.edu	37	3	42679035	42679036	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK3	1795	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR23A	729627	genome.wustl.edu	37	3	138724469	138724469	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389168	389168	genome.wustl.edu	37	3	155705371	155705371	+	RNA	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BOD1L	259282	genome.wustl.edu	37	4	13610189	13610189	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECRL	253017	genome.wustl.edu	37	4	65274963	65274963	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CENPC1	1060	genome.wustl.edu	37	4	68355753	68355753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HELQ	113510	genome.wustl.edu	37	4	84361141	84361142	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000200917	0	genome.wustl.edu	37	4	106328247	106328247	+	RNA	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKN2AIP	55602	genome.wustl.edu	37	4	184366060	184366061	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX25	83891	genome.wustl.edu	37	4	186272695	186272695	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187539662	187539663	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIO	7204	genome.wustl.edu	37	5	14462953	14462953	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASA1	5921	genome.wustl.edu	37	5	86564511	86564511	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A46	91137	genome.wustl.edu	37	5	110092466	110092466	+	Splice_Site	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA4	56111	genome.wustl.edu	37	5	140735405	140735405	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGAT4B	11282	genome.wustl.edu	37	5	179227545	179227545	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0240	23506	genome.wustl.edu	37	6	42832627	42832627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC17A5	26503	genome.wustl.edu	37	6	74351541	74351542	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP12	9590	genome.wustl.edu	37	6	151673901	151673902	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL2	83887	genome.wustl.edu	37	6	167754707	167754708	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLM	27434	genome.wustl.edu	37	7	44120414	44120414	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZKSCAN1	7586	genome.wustl.edu	37	7	99631749	99631750	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRBV27	28560	genome.wustl.edu	37	7	142423221	142423221	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM33	155435	genome.wustl.edu	37	7	155556609	155556609	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC6	23639	genome.wustl.edu	37	8	133634925	133634926	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RCL1	10171	genome.wustl.edu	37	9	4826988	4826988	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD20A1	84210	genome.wustl.edu	37	9	67966645	67966645	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBQLN1	29979	genome.wustl.edu	37	9	86297873	86297873	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX10	54881	genome.wustl.edu	37	9	103102602	103102603	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNC	3371	genome.wustl.edu	37	9	117849277	117849277	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1462	57608	genome.wustl.edu	37	10	30336683	30336683	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEND1	51286	genome.wustl.edu	37	11	788204	788204	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CWF19L2	143884	genome.wustl.edu	37	11	107325228	107325228	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCL9L	283149	genome.wustl.edu	37	11	118769879	118769880	+	Frame_Shift_Ins	INS	-	-	C			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIK4	2900	genome.wustl.edu	37	11	120827592	120827592	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO8	10526	genome.wustl.edu	37	12	30818767	30818767	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DENND5B	160518	genome.wustl.edu	37	12	31605092	31605092	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENDOU	8909	genome.wustl.edu	37	12	48106392	48106392	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF40B	25766	genome.wustl.edu	37	12	50025258	50025258	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP5L	57701	genome.wustl.edu	37	12	50189827	50189828	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC10	376132	genome.wustl.edu	37	12	70003905	70003905	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KSR2	283455	genome.wustl.edu	37	12	117977605	117977605	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SACS	26278	genome.wustl.edu	37	13	23908934	23908934	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KBTBD6	89890	genome.wustl.edu	37	13	41705322	41705322	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXG1	2290	genome.wustl.edu	37	14	29237780	29237780	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIS18BP1	55320	genome.wustl.edu	37	14	45693722	45693722	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf43	91748	genome.wustl.edu	37	14	74205773	74205773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2AK4	440275	genome.wustl.edu	37	15	40246159	40246159	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTBK2	146057	genome.wustl.edu	37	15	43067596	43067596	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289853	100289853	genome.wustl.edu	37	16	570340	570340	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHTF18	63922	genome.wustl.edu	37	16	842546	842546	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF205	7755	genome.wustl.edu	37	16	3169991	3169991	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPL	5493	genome.wustl.edu	37	16	4934835	4934835	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000236139	0	genome.wustl.edu	37	16	53404609	53404609	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFP90	146198	genome.wustl.edu	37	16	68598463	68598463	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HYDIN	54768	genome.wustl.edu	37	16	70866832	70866833	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARVELD3	91862	genome.wustl.edu	37	16	71668442	71668442	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000225467	0	genome.wustl.edu	37	16	89336748	89336749	+	RNA	DEL	TT	TT	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMTA2	23125	genome.wustl.edu	37	17	4875738	4875738	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC16A11	162515	genome.wustl.edu	37	17	6945716	6945717	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX1	3975	genome.wustl.edu	37	17	35300395	35300395	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX52	11056	genome.wustl.edu	37	17	35978415	35978415	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APOH	350	genome.wustl.edu	37	17	64210715	64210716	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA8	10351	genome.wustl.edu	37	17	66871498	66871499	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6C	57690	genome.wustl.edu	37	17	76046610	76046611	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC8	147138	genome.wustl.edu	37	17	76134212	76134212	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETBP1	26040	genome.wustl.edu	37	18	42530560	42530560	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCC	1630	genome.wustl.edu	37	18	50985695	50985696	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STK11	6794	genome.wustl.edu	37	19	1221236	1221236	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ELL	8178	genome.wustl.edu	37	19	18561594	18561595	+	Frame_Shift_Ins	INS	-	-	G			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL4	9757	genome.wustl.edu	37	19	36227995	36227995	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLIP3	25999	genome.wustl.edu	37	19	36510105	36510105	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGLON5	402665	genome.wustl.edu	37	19	51827029	51827029	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf26	26074	genome.wustl.edu	37	20	20123534	20123534	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RALGAPB	57148	genome.wustl.edu	37	20	37177336	37177336	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRIP1	8204	genome.wustl.edu	37	21	16338330	16338330	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCAF4	57466	genome.wustl.edu	37	21	33074655	33074655	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYRK1A	1859	genome.wustl.edu	37	21	38853058	38853059	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAPPC10	7109	genome.wustl.edu	37	21	45518390	45518390	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LZTR1	8216	genome.wustl.edu	37	22	21348430	21348430	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCUBE1	80274	genome.wustl.edu	37	22	43619184	43619184	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000234295	0	genome.wustl.edu	37	GL000192.1	381169	381170	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BEND2	139105	genome.wustl.edu	37	X	18183229	18183230	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMCX3	51566	genome.wustl.edu	37	X	100881034	100881034	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCA1	6594	genome.wustl.edu	37	X	128631828	128631829	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A18B-01	TCGA-BG-A18B-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC10A3	8273	genome.wustl.edu	37	X	153716473	153716473	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A18B-01	TCGA-BG-A18B-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
