Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ARID1A	8289	genome.wustl.edu	37	1	27087503	27087503	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGBL4	84871	genome.wustl.edu	37	1	50163038	50163038	+	Missense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYW3	127253	genome.wustl.edu	37	1	75229758	75229758	+	Silent	SNP	T	T	C			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBPF10	100132406	genome.wustl.edu	37	1	145302745	145302745	+	Missense_Mutation	SNP	A	A	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF11	9826	genome.wustl.edu	37	1	156954218	156954218	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTA1	6708	genome.wustl.edu	37	1	158641158	158641158	+	Missense_Mutation	SNP	A	A	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIRP2	129446	genome.wustl.edu	37	2	168105921	168105921	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGT1A10	54575	genome.wustl.edu	37	2	234545246	234545246	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266098	41266098	+	Missense_Mutation	SNP	A	A	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMIE	259236	genome.wustl.edu	37	3	46751115	46751115	+	Silent	SNP	A	A	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERC2	26059	genome.wustl.edu	37	3	56044602	56044602	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDST4	64579	genome.wustl.edu	37	4	115997534	115997534	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR12	54545	genome.wustl.edu	37	5	32230203	32230203	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0319	9856	genome.wustl.edu	37	6	24564465	24564465	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RMND1	55005	genome.wustl.edu	37	6	151738458	151738458	+	Missense_Mutation	SNP	A	A	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCAF8	22828	genome.wustl.edu	37	6	155145385	155145385	+	Silent	SNP	C	C	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZPBP	11055	genome.wustl.edu	37	7	50023093	50023093	+	Missense_Mutation	SNP	A	A	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRNA2	1135	genome.wustl.edu	37	8	27327369	27327369	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF19A	25897	genome.wustl.edu	37	8	101271122	101271122	+	Missense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF10	79269	genome.wustl.edu	37	9	37861385	37861385	+	Silent	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUSK	4593	genome.wustl.edu	37	9	113547894	113547894	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF12	113220	genome.wustl.edu	37	9	116860020	116860020	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCHD3	374308	genome.wustl.edu	37	10	27703174	27703174	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY4	57705	genome.wustl.edu	37	10	49931532	49931532	+	Missense_Mutation	SNP	C	C	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692787	89692787	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MADD	8567	genome.wustl.edu	37	11	47303965	47303965	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8H2	390151	genome.wustl.edu	37	11	55873414	55873414	+	Missense_Mutation	SNP	A	A	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDCA5	113130	genome.wustl.edu	37	11	64846705	64846705	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPT1A	1374	genome.wustl.edu	37	11	68527038	68527038	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP35	57558	genome.wustl.edu	37	11	77919935	77919935	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1731	85459	genome.wustl.edu	37	11	93400895	93400895	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CADM1	23705	genome.wustl.edu	37	11	115102158	115102158	+	Silent	SNP	A	A	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD4	1108	genome.wustl.edu	37	12	6697522	6697522	+	Missense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPR2	3709	genome.wustl.edu	37	12	26755312	26755312	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR182	11318	genome.wustl.edu	37	12	57389718	57389718	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGD6	55785	genome.wustl.edu	37	12	95604391	95604391	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETD1B	23067	genome.wustl.edu	37	12	122265902	122265902	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETD1B	23067	genome.wustl.edu	37	12	122265929	122265929	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF268	10795	genome.wustl.edu	37	12	133779972	133779972	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAS6	2621	genome.wustl.edu	37	13	114530024	114530024	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000136315	0	genome.wustl.edu	37	14	21388172	21388172	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLRT2	23768	genome.wustl.edu	37	14	86089691	86089691	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCL11B	64919	genome.wustl.edu	37	14	99641793	99641793	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM62	80021	genome.wustl.edu	37	15	43476493	43476493	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA3	21	genome.wustl.edu	37	16	2334851	2334851	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf81	23587	genome.wustl.edu	37	17	7158018	7158018	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH7	1005	genome.wustl.edu	37	18	63511085	63511085	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBA52	7311	genome.wustl.edu	37	19	18684492	18684492	+	Missense_Mutation	SNP	C	C	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HPN	3249	genome.wustl.edu	37	19	35551550	35551550	+	Missense_Mutation	SNP	C	C	G			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL4	9757	genome.wustl.edu	37	19	36210381	36210381	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RDH13	112724	genome.wustl.edu	37	19	55568131	55568131	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX6B2	125965	genome.wustl.edu	37	19	55865140	55865140	+	Silent	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP8	126205	genome.wustl.edu	37	19	56466488	56466488	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLTCL1	8218	genome.wustl.edu	37	22	19168259	19168259	+	Missense_Mutation	SNP	C	C	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MN1	4330	genome.wustl.edu	37	22	28193835	28193835	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNPLA3	80339	genome.wustl.edu	37	22	44328899	44328899	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	943	943	+	RNA	SNP	G	G	C			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WAS	7454	genome.wustl.edu	37	X	48545265	48545265	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PQBP1	10084	genome.wustl.edu	37	X	48759802	48759802	+	Silent	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF9	23229	genome.wustl.edu	37	X	62917005	62917005	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP7D3	79649	genome.wustl.edu	37	X	135313917	135313917	+	Missense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEXB	3074	genome.wustl.edu	37	5	73985275	73985275	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT2	2196	genome.wustl.edu	37	5	150924797	150924797	+	Missense_Mutation	SNP	T	T	C			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMIZ2	83637	genome.wustl.edu	37	7	44798936	44798936	+	Missense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNV1	27012	genome.wustl.edu	37	8	110986321	110986321	+	Silent	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKN2A	1029	genome.wustl.edu	37	9	21971028	21971028	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8G5	219865	genome.wustl.edu	37	11	124135619	124135619	+	Silent	SNP	T	T	C			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288406	100288406	genome.wustl.edu	37	12	92226	92226	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4K5	79317	genome.wustl.edu	37	14	20389327	20389327	+	Missense_Mutation	SNP	G	G	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS7	11173	genome.wustl.edu	37	15	79058987	79058987	+	Missense_Mutation	SNP	G	G	A			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF213	7760	genome.wustl.edu	37	16	3190884	3190884	+	Missense_Mutation	SNP	C	C	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729057	729057	genome.wustl.edu	37	22	16123203	16123203	+	RNA	SNP	T	T	C			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27094291	27094292	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARD10	29775	genome.wustl.edu	37	22	37906309	37906314	+	In_Frame_Del	DEL	CTCCTT	CTCCTT	-			TCGA-BK-A0CB-01	TCGA-BK-A0CB-01	CTCCTT	CTCCTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
