Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CASZ1	54897	genome.wustl.edu	37	1	10714626	10714626	+	Missense_Mutation	SNP	G	G	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEPN1	57190	genome.wustl.edu	37	1	26136184	26136184	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R3	8503	genome.wustl.edu	37	1	46521590	46521590	+	Missense_Mutation	SNP	C	C	G			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCHH	7062	genome.wustl.edu	37	1	152080295	152080295	+	Missense_Mutation	SNP	C	C	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL24	11009	genome.wustl.edu	37	1	207076380	207076380	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR7E91P	79315	genome.wustl.edu	37	2	71256601	71256601	+	RNA	SNP	T	T	C			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLASP1	23332	genome.wustl.edu	37	2	122165156	122165156	+	Missense_Mutation	SNP	T	T	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD5	55777	genome.wustl.edu	37	2	149226969	149226969	+	Missense_Mutation	SNP	T	T	C			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNH8	131096	genome.wustl.edu	37	3	19575061	19575061	+	Missense_Mutation	SNP	C	C	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000214666	0	genome.wustl.edu	37	6	44240667	44240667	+	Missense_Mutation	SNP	C	C	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1B	57492	genome.wustl.edu	37	6	157521860	157521860	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYOM2	9172	genome.wustl.edu	37	8	2064033	2064033	+	Missense_Mutation	SNP	G	G	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFCAB4B	84766	genome.wustl.edu	37	12	3788124	3788124	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DTX1	1840	genome.wustl.edu	37	12	113531471	113531471	+	Silent	SNP	G	G	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBX3	6926	genome.wustl.edu	37	12	115120860	115120860	+	Missense_Mutation	SNP	T	T	C			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	49039206	49039206	+	Nonsense_Mutation	SNP	C	C	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC1	8925	genome.wustl.edu	37	15	63967150	63967150	+	Nonsense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CILP	8483	genome.wustl.edu	37	15	65489645	65489645	+	Silent	SNP	A	A	G			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LINGO1	84894	genome.wustl.edu	37	15	77907881	77907881	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7577566	7577566	+	Missense_Mutation	SNP	T	T	C			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX42	11325	genome.wustl.edu	37	17	61864561	61864561	+	Nonsense_Mutation	SNP	C	C	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA7	10347	genome.wustl.edu	37	19	1056423	1056423	+	Missense_Mutation	SNP	C	C	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIN3B	23309	genome.wustl.edu	37	19	16989491	16989491	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST8	64377	genome.wustl.edu	37	19	34263543	34263543	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLK4	9622	genome.wustl.edu	37	19	51410312	51410312	+	Missense_Mutation	SNP	C	C	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF808	388558	genome.wustl.edu	37	19	53057650	53057650	+	Missense_Mutation	SNP	G	G	T			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM71E2	284418	genome.wustl.edu	37	19	55866692	55866692	+	Silent	SNP	G	G	C			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GZF1	64412	genome.wustl.edu	37	20	23346056	23346056	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SALL4	57167	genome.wustl.edu	37	20	50406731	50406731	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIOBP	11078	genome.wustl.edu	37	22	38106483	38106483	+	Missense_Mutation	SNP	G	G	C			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAGE1	55511	genome.wustl.edu	37	X	134992697	134992697	+	Missense_Mutation	SNP	C	C	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2B3	492	genome.wustl.edu	37	X	152806995	152806995	+	Silent	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289653	100289653	genome.wustl.edu	37	6	87607246	87607246	+	Silent	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OS9	10956	genome.wustl.edu	37	12	58112083	58112083	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198899	0	genome.wustl.edu	37	MT	9026	9026	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTF1	4520	genome.wustl.edu	37	1	38281006	38281012	+	Frame_Shift_Del	DEL	GGATGAT	GGATGAT	-			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	GGATGAT	GGATGAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TXNIP	10628	genome.wustl.edu	37	1	145440062	145440064	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591143	67591144	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591146	67591146	+	Frame_Shift_Del	DEL	A	A	-			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591148	67591154	+	Frame_Shift_Del	DEL	TTGATGT	TTGATGT	-			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	TTGATGT	TTGATGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100294132	100294132	genome.wustl.edu	37	6	4077904	4077908	+	Frame_Shift_Del	DEL	CAGAA	CAGAA	-			TCGA-BS-A0U9-01	TCGA-BS-A0U9-01	CAGAA	CAGAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
