Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CROCC	9696	genome.wustl.edu	37	1	17257042	17257042	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP24	23358	genome.wustl.edu	37	1	55563319	55563319	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MR1	3140	genome.wustl.edu	37	1	181021484	181021484	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX9	56956	genome.wustl.edu	37	1	197890500	197890500	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASTL	431705	genome.wustl.edu	37	2	96798452	96798452	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179489418	179489418	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC21A	199223	genome.wustl.edu	37	3	39178397	39178397	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266103	41266103	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BSN	8927	genome.wustl.edu	37	3	49662655	49662655	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389137	389137	genome.wustl.edu	37	3	94225660	94225660	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936093	178936093	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA5	2044	genome.wustl.edu	37	4	66230818	66230818	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA6	56142	genome.wustl.edu	37	5	140209296	140209296	+	Silent	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNIP1	10318	genome.wustl.edu	37	5	150416376	150416376	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABHD11	83451	genome.wustl.edu	37	7	73150872	73150872	+	RNA	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNKS	8658	genome.wustl.edu	37	8	9622273	9622273	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHMP4C	92421	genome.wustl.edu	37	8	82644956	82644956	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXD4L5	653427	genome.wustl.edu	37	9	70177113	70177113	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR13C5	138799	genome.wustl.edu	37	9	107361094	107361094	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000232330	0	genome.wustl.edu	37	9	136568033	136568033	+	RNA	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMSAP1	157922	genome.wustl.edu	37	9	138774890	138774890	+	Silent	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000219061	0	genome.wustl.edu	37	11	49860150	49860150	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A102-01	TCGA-D1-A102-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR9I1	219954	genome.wustl.edu	37	11	57886603	57886603	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A6	9356	genome.wustl.edu	37	11	62744336	62744336	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC390251	390251	genome.wustl.edu	37	11	113660246	113660246	+	RNA	SNP	G	G	T			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEAD4	7004	genome.wustl.edu	37	12	3147205	3147205	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAO	1610	genome.wustl.edu	37	12	109292545	109292545	+	Silent	SNP	C	C	A			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACADS	35	genome.wustl.edu	37	12	121176677	121176677	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXN3	1112	genome.wustl.edu	37	14	89878374	89878374	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4N4	283694	genome.wustl.edu	37	15	22382966	22382966	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEIS2	4212	genome.wustl.edu	37	15	37390260	37390260	+	Silent	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO9A	4649	genome.wustl.edu	37	15	72338362	72338362	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A102-01	TCGA-D1-A102-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBFOX1	54715	genome.wustl.edu	37	16	7568201	7568201	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC3A	10143	genome.wustl.edu	37	16	78064698	78064698	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH9	1770	genome.wustl.edu	37	17	11666855	11666855	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOT1	55288	genome.wustl.edu	37	17	30538195	30538195	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMD11	5717	genome.wustl.edu	37	17	30804557	30804557	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOXHD1	125336	genome.wustl.edu	37	18	44184141	44184141	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000207357	0	genome.wustl.edu	37	19	1021621	1021621	+	RNA	SNP	T	T	C			TCGA-D1-A102-01	TCGA-D1-A102-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLLT1	4298	genome.wustl.edu	37	19	6230656	6230656	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF558	148156	genome.wustl.edu	37	19	8922212	8922212	+	Silent	SNP	T	T	C			TCGA-D1-A102-01	TCGA-D1-A102-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC55908	55908	genome.wustl.edu	37	19	11350951	11350951	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF536	9745	genome.wustl.edu	37	19	30934973	30934973	+	Silent	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R1A	5518	genome.wustl.edu	37	19	52714556	52714556	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A102-01	TCGA-D1-A102-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC1	6614	genome.wustl.edu	37	20	3677408	3677408	+	Silent	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADRM1	11047	genome.wustl.edu	37	20	60881718	60881718	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MT-CYB	0	genome.wustl.edu	37	MT	14991	14991	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A102-01	TCGA-D1-A102-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTK	695	genome.wustl.edu	37	X	100624986	100624986	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A5	1287	genome.wustl.edu	37	X	107858225	107858225	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF6	84295	genome.wustl.edu	37	X	133547669	133547669	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A102-01	TCGA-D1-A102-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GABRA3	2556	genome.wustl.edu	37	X	151514097	151514097	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC646214	646214	genome.wustl.edu	37	15	21937816	21937816	+	RNA	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NTHL1	4913	genome.wustl.edu	37	16	2097781	2097781	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A102-01	TCGA-D1-A102-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZP2	7783	genome.wustl.edu	37	16	21213582	21213582	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A102-01	TCGA-D1-A102-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644172	644172	genome.wustl.edu	37	17	43678378	43678378	+	RNA	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB41	347517	genome.wustl.edu	37	X	69502149	69502149	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A102-01	TCGA-D1-A102-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720852	89720852	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A102-01	TCGA-D1-A102-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGK1	6446	genome.wustl.edu	37	6	134491995	134491997	+	In_Frame_Del	DEL	TTA	TTA	-			TCGA-D1-A102-01	TCGA-D1-A102-01	TTA	TTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SASH1	23328	genome.wustl.edu	37	6	148808754	148808756	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-D1-A102-01	TCGA-D1-A102-01	AGG	AGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3CL	728689	genome.wustl.edu	37	16	28403353	28403355	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-D1-A102-01	TCGA-D1-A102-01	TCC	TCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0753	9851	genome.wustl.edu	37	17	6538422	6538424	+	Frame_Shift_Del	DEL	ATA	ATA	-			TCGA-D1-A102-01	TCGA-D1-A102-01	ATA	ATA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
