Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AGRN	375790	genome.wustl.edu	37	1	978668	978668	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GABRD	2563	genome.wustl.edu	37	1	1961035	1961035	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CD	5293	genome.wustl.edu	37	1	9778764	9778764	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWA5B1	127731	genome.wustl.edu	37	1	20644138	20644138	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP48	84196	genome.wustl.edu	37	1	22078094	22078094	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSPG2	3339	genome.wustl.edu	37	1	22172661	22172661	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYPLA2	11313	genome.wustl.edu	37	1	24119706	24119706	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf201	90529	genome.wustl.edu	37	1	24687368	24687368	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RCAN3	11123	genome.wustl.edu	37	1	24861709	24861709	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDLRAP1	26119	genome.wustl.edu	37	1	25893450	25893450	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM54B	56181	genome.wustl.edu	37	1	26153281	26153281	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHDDS	79947	genome.wustl.edu	37	1	26774075	26774075	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SESN2	83667	genome.wustl.edu	37	1	28607232	28607232	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUM1	9698	genome.wustl.edu	37	1	31501707	31501707	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIVEP3	59269	genome.wustl.edu	37	1	42049810	42049810	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EBNA1BP2	10969	genome.wustl.edu	37	1	43636441	43636441	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF220	55182	genome.wustl.edu	37	1	44877784	44877784	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATPAF1-AS1	374973	genome.wustl.edu	37	1	47138873	47138873	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4A22	284541	genome.wustl.edu	37	1	47614339	47614339	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BEND5	79656	genome.wustl.edu	37	1	49227039	49227039	+	Silent	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1107	23285	genome.wustl.edu	37	1	92646246	92646246	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBL4B	164153	genome.wustl.edu	37	1	110655663	110655663	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTF2	8458	genome.wustl.edu	37	1	117617938	117617938	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBX15	6913	genome.wustl.edu	37	1	119427539	119427539	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TUFT1	7286	genome.wustl.edu	37	1	151512890	151512890	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS3	65123	genome.wustl.edu	37	1	153735774	153735774	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DENND4B	9909	genome.wustl.edu	37	1	153916683	153916683	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHC1	6464	genome.wustl.edu	37	1	154941903	154941903	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBS3	7059	genome.wustl.edu	37	1	155172892	155172892	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GON4L	54856	genome.wustl.edu	37	1	155722367	155722367	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMA4A	64218	genome.wustl.edu	37	1	156132838	156132838	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRABP2	1382	genome.wustl.edu	37	1	156670736	156670736	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ETV3	2117	genome.wustl.edu	37	1	157095708	157095708	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FCRL5	83416	genome.wustl.edu	37	1	157512659	157512659	+	Silent	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTA1	6708	genome.wustl.edu	37	1	158621212	158621212	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9	57549	genome.wustl.edu	37	1	159898706	159898706	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf112	55732	genome.wustl.edu	37	1	169798511	169798511	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf129	80133	genome.wustl.edu	37	1	170961350	170961350	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRC2C	23215	genome.wustl.edu	37	1	171526414	171526414	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F13B	2165	genome.wustl.edu	37	1	197031986	197031986	+	Splice_Site	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF21B	23046	genome.wustl.edu	37	1	200959404	200959404	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC26A9	115019	genome.wustl.edu	37	1	205904924	205904924	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA2	5362	genome.wustl.edu	37	1	208200646	208200646	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VASH2	79805	genome.wustl.edu	37	1	213134593	213134593	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANGEL2	90806	genome.wustl.edu	37	1	213170503	213170503	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGBD5	79605	genome.wustl.edu	37	1	230468600	230468600	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEATR1	55127	genome.wustl.edu	37	1	236718764	236718764	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KMO	8564	genome.wustl.edu	37	1	241723977	241723977	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR64	128025	genome.wustl.edu	37	1	241946669	241946669	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF26B	55083	genome.wustl.edu	37	1	245530312	245530312	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2C3	81472	genome.wustl.edu	37	1	247695138	247695138	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPO	7173	genome.wustl.edu	37	2	1491661	1491661	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF1B	9014	genome.wustl.edu	37	2	9994460	9994460	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGBL5	60509	genome.wustl.edu	37	2	27290365	27290365	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF513	130557	genome.wustl.edu	37	2	27601670	27601670	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRXN1	9378	genome.wustl.edu	37	2	50724801	50724801	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGUOK	1716	genome.wustl.edu	37	2	74184306	74184306	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf81	388963	genome.wustl.edu	37	2	74642496	74642496	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2AK3	9451	genome.wustl.edu	37	2	88885387	88885387	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPIA	22934	genome.wustl.edu	37	2	89037549	89037549	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNRNP200	23020	genome.wustl.edu	37	2	96943590	96943590	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF149	284996	genome.wustl.edu	37	2	101911538	101911538	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN4	5775	genome.wustl.edu	37	2	120712791	120712791	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP5	129684	genome.wustl.edu	37	2	125405357	125405357	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1B	53353	genome.wustl.edu	37	2	141680638	141680638	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD5	55777	genome.wustl.edu	37	2	149247537	149247537	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152537339	152537339	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179640429	179640429	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179641295	179641295	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL3A1	1281	genome.wustl.edu	37	2	189859059	189859059	+	Splice_Site	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR1	2825	genome.wustl.edu	37	2	207041245	207041245	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TUBA4A	7277	genome.wustl.edu	37	2	220115497	220115497	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC19A3	80704	genome.wustl.edu	37	2	228560684	228560684	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXCR7	57007	genome.wustl.edu	37	2	237489993	237489993	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PER2	8864	genome.wustl.edu	37	2	239165670	239165670	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF1A	547	genome.wustl.edu	37	2	241700654	241700654	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG4B	23192	genome.wustl.edu	37	2	242608095	242608095	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf20	84077	genome.wustl.edu	37	3	14799019	14799019	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SATB1	6304	genome.wustl.edu	37	3	18436007	18436007	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF197	10168	genome.wustl.edu	37	3	44684552	44684552	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TGM4	7047	genome.wustl.edu	37	3	44935129	44935129	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FYCO1	79443	genome.wustl.edu	37	3	46008782	46008782	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UQCRC1	7384	genome.wustl.edu	37	3	48636590	48636590	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP4	7375	genome.wustl.edu	37	3	49348985	49348985	+	Nonstop_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BSN	8927	genome.wustl.edu	37	3	49698457	49698457	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM6	10180	genome.wustl.edu	37	3	50005749	50005749	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAPKAPK3	7867	genome.wustl.edu	37	3	50683147	50683147	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM15B	29890	genome.wustl.edu	37	3	51431059	51431059	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTN3	5067	genome.wustl.edu	37	3	74350807	74350807	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1407	57577	genome.wustl.edu	37	3	113684045	113684045	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KPNA1	3836	genome.wustl.edu	37	3	122152574	122152574	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROPN1B	152015	genome.wustl.edu	37	3	125702136	125702136	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZXDC	79364	genome.wustl.edu	37	3	126180980	126180980	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf25	90288	genome.wustl.edu	37	3	129121406	129121406	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2C1	27032	genome.wustl.edu	37	3	130686039	130686039	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC13	23317	genome.wustl.edu	37	3	132172153	132172153	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KY	339855	genome.wustl.edu	37	3	134323081	134323081	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR23A	729627	genome.wustl.edu	37	3	138724332	138724332	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINI2	5276	genome.wustl.edu	37	3	167183307	167183307	+	Silent	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNIK	23043	genome.wustl.edu	37	3	170819285	170819285	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916726	178916726	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL24	54800	genome.wustl.edu	37	3	183382725	183382725	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP6D1	79929	genome.wustl.edu	37	3	183535882	183535882	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCF3	55324	genome.wustl.edu	37	3	183905737	183905737	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHHADH	1962	genome.wustl.edu	37	3	184922527	184922527	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SENP2	59343	genome.wustl.edu	37	3	185318610	185318610	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SENP2	59343	genome.wustl.edu	37	3	185332506	185332506	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LPP	4026	genome.wustl.edu	37	3	188584130	188584130	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC4	4585	genome.wustl.edu	37	3	195508158	195508158	+	Silent	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF212	285498	genome.wustl.edu	37	4	1107171	1107171	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTT	3064	genome.wustl.edu	37	4	3230404	3230404	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORCS2	57537	genome.wustl.edu	37	4	7728627	7728627	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC84740	84740	genome.wustl.edu	37	4	7780639	7780639	+	RNA	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RELL1	768211	genome.wustl.edu	37	4	37649014	37649014	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC30A9	10463	genome.wustl.edu	37	4	42025372	42025372	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIT	3815	genome.wustl.edu	37	4	55564723	55564723	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGT2B7	7364	genome.wustl.edu	37	4	69962538	69962538	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THAP9	79725	genome.wustl.edu	37	4	83838832	83838832	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFF1	4299	genome.wustl.edu	37	4	88053428	88053428	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDLIM5	10611	genome.wustl.edu	37	4	95497038	95497038	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9B2	133308	genome.wustl.edu	37	4	103970063	103970063	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENPEP	2028	genome.wustl.edu	37	4	111397732	111397732	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PITX2	5308	genome.wustl.edu	37	4	111539567	111539567	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FREM3	166752	genome.wustl.edu	37	4	144619801	144619801	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMAD1	4086	genome.wustl.edu	37	4	146460985	146460985	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POU4F2	5458	genome.wustl.edu	37	4	147561807	147561807	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCLK2	166614	genome.wustl.edu	37	4	151169507	151169507	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAB21L2	10586	genome.wustl.edu	37	4	151504832	151504832	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAPGEF2	9693	genome.wustl.edu	37	4	160251521	160251521	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARCH1	55016	genome.wustl.edu	37	4	164466833	164466833	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPATA4	132851	genome.wustl.edu	37	4	177109361	177109361	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ3	55714	genome.wustl.edu	37	4	183659622	183659622	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1430	57587	genome.wustl.edu	37	4	186111771	186111771	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORBS2	8470	genome.wustl.edu	37	4	186560088	186560088	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLKB1	3818	genome.wustl.edu	37	4	187173195	187173195	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC11B	653082	genome.wustl.edu	37	5	766919	766919	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH5	1767	genome.wustl.edu	37	5	13901502	13901502	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO10	4651	genome.wustl.edu	37	5	16764447	16764447	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC45A2	51151	genome.wustl.edu	37	5	33954603	33954603	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf34	375444	genome.wustl.edu	37	5	43490781	43490781	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CWC27	10283	genome.wustl.edu	37	5	64100159	64100159	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591246	67591246	+	Splice_Site	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENC1	8507	genome.wustl.edu	37	5	73932188	73932188	+	Splice_Site	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSSK1B	83942	genome.wustl.edu	37	5	112769954	112769954	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
P4HA2	8974	genome.wustl.edu	37	5	131530691	131530691	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFF4	27125	genome.wustl.edu	37	5	132270345	132270345	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HARS2	23438	genome.wustl.edu	37	5	140076933	140076933	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA12	56137	genome.wustl.edu	37	5	140256434	140256434	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB13	56123	genome.wustl.edu	37	5	140595612	140595612	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLRA1	2741	genome.wustl.edu	37	5	151231142	151231142	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF44	22838	genome.wustl.edu	37	5	175956359	175956359	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS14	10636	genome.wustl.edu	37	5	176798196	176798196	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF879	345462	genome.wustl.edu	37	5	178460019	178460019	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHACTR1	221692	genome.wustl.edu	37	6	13283774	13283774	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GMPR	2766	genome.wustl.edu	37	6	16247135	16247135	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKAL1	54901	genome.wustl.edu	37	6	21231175	21231175	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM38	10475	genome.wustl.edu	37	6	25983464	25983464	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2BM	8342	genome.wustl.edu	37	6	27783020	27783020	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX16	8449	genome.wustl.edu	37	6	30632993	30632993	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC44A4	80736	genome.wustl.edu	37	6	31833349	31833349	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGFL8	80864	genome.wustl.edu	37	6	32134574	32134574	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF8	9025	genome.wustl.edu	37	6	37358608	37358608	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDGA1	266727	genome.wustl.edu	37	6	37631862	37631862	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNK5	8645	genome.wustl.edu	37	6	39158717	39158717	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCND3	896	genome.wustl.edu	37	6	41903698	41903698	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF318	24149	genome.wustl.edu	37	6	43305342	43305342	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC10	89845	genome.wustl.edu	37	6	43400813	43400813	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFAP2B	7021	genome.wustl.edu	37	6	50810909	50810909	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD109	135228	genome.wustl.edu	37	6	74524791	74524791	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTK	7272	genome.wustl.edu	37	6	80751905	80751905	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASCC3	10973	genome.wustl.edu	37	6	101296063	101296063	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM1	2911	genome.wustl.edu	37	6	146480622	146480622	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAB2	23118	genome.wustl.edu	37	6	149700167	149700167	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERAC1	84947	genome.wustl.edu	37	6	158567834	158567834	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A1	6580	genome.wustl.edu	37	6	160555052	160555052	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR31	2853	genome.wustl.edu	37	6	167571001	167571001	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX8	29886	genome.wustl.edu	37	7	2297105	2297105	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX8	29886	genome.wustl.edu	37	7	2317822	2317822	+	Silent	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARD11	84433	genome.wustl.edu	37	7	2962834	2962834	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPY19L1	23333	genome.wustl.edu	37	7	35057495	35057495	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMIZ2	83637	genome.wustl.edu	37	7	44802492	44802492	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF680	340252	genome.wustl.edu	37	7	63982366	63982366	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABHD11	83451	genome.wustl.edu	37	7	73151835	73151835	+	RNA	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMA3D	223117	genome.wustl.edu	37	7	84649599	84649599	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACHE	43	genome.wustl.edu	37	7	100487859	100487859	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CG	5294	genome.wustl.edu	37	7	106508064	106508064	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WEE2	494551	genome.wustl.edu	37	7	141424838	141424838	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGAM	8972	genome.wustl.edu	37	7	141731551	141731551	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZYX	7791	genome.wustl.edu	37	7	143085432	143085432	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF5	7984	genome.wustl.edu	37	7	144077042	144077042	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP2	26047	genome.wustl.edu	37	7	147914596	147914596	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF862	643641	genome.wustl.edu	37	7	149545162	149545162	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLGAP2	9228	genome.wustl.edu	37	8	1497385	1497385	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD1	64478	genome.wustl.edu	37	8	3200968	3200968	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGK223	157285	genome.wustl.edu	37	8	8185399	8185399	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNKS	8658	genome.wustl.edu	37	8	9584166	9584166	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LGI3	203190	genome.wustl.edu	37	8	22006023	22006023	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EBF2	64641	genome.wustl.edu	37	8	25899750	25899750	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HGSNAT	138050	genome.wustl.edu	37	8	43024316	43024316	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNAI2	6591	genome.wustl.edu	37	8	49832557	49832557	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDR16C6P	442388	genome.wustl.edu	37	8	57302813	57302813	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC392232	392232	genome.wustl.edu	37	8	73163714	73163714	+	RNA	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTSS1	9788	genome.wustl.edu	37	8	125565583	125565583	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFAT	57623	genome.wustl.edu	37	8	135614730	135614730	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTK2	5747	genome.wustl.edu	37	8	141675056	141675056	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R16A	84988	genome.wustl.edu	37	8	145724196	145724196	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFT74	80173	genome.wustl.edu	37	9	27048229	27048229	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUSC2	9853	genome.wustl.edu	37	9	35560615	35560615	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD1	22844	genome.wustl.edu	37	9	37746496	37746496	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPM3	80036	genome.wustl.edu	37	9	73168089	73168089	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASEF	158158	genome.wustl.edu	37	9	85620367	85620367	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROR2	4920	genome.wustl.edu	37	9	94487153	94487153	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NANS	54187	genome.wustl.edu	37	9	100845195	100845195	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF462	58499	genome.wustl.edu	37	9	109685830	109685830	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf29	652972	genome.wustl.edu	37	9	114371458	114371458	+	Silent	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF12	113220	genome.wustl.edu	37	9	116854163	116854163	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKNA	80709	genome.wustl.edu	37	9	117124105	117124105	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXW2	26190	genome.wustl.edu	37	9	123535119	123535119	+	Splice_Site	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAF1	7185	genome.wustl.edu	37	9	123675774	123675774	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RABGAP1	23637	genome.wustl.edu	37	9	125852567	125852567	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAPVD1	26130	genome.wustl.edu	37	9	128094805	128094805	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAF2	7186	genome.wustl.edu	37	9	139818323	139818323	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR37	22884	genome.wustl.edu	37	10	1130353	1130353	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKCQ	5588	genome.wustl.edu	37	10	6506334	6506334	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WAC	51322	genome.wustl.edu	37	10	28879705	28879705	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SVIL	6840	genome.wustl.edu	37	10	29769617	29769617	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTPAP	55149	genome.wustl.edu	37	10	30654224	30654224	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF438	220929	genome.wustl.edu	37	10	31139123	31139123	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARD3	56288	genome.wustl.edu	37	10	34400387	34400387	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF248	57209	genome.wustl.edu	37	10	38121477	38121477	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBP3	5949	genome.wustl.edu	37	10	48383988	48383988	+	Splice_Site	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANK3	288	genome.wustl.edu	37	10	61830642	61830642	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJB12	54788	genome.wustl.edu	37	10	74095665	74095665	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC24C	9632	genome.wustl.edu	37	10	75520137	75520137	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2C9	1559	genome.wustl.edu	37	10	96701613	96701613	+	Splice_Site	SNP	A	A	T			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLIT1	6585	genome.wustl.edu	37	10	98808782	98808782	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNNM1	26507	genome.wustl.edu	37	10	101147593	101147593	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC31B	25956	genome.wustl.edu	37	10	102249071	102249071	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLK	9748	genome.wustl.edu	37	10	105770628	105770628	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MKI67	4288	genome.wustl.edu	37	10	129906123	129906123	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B4GALNT4	338707	genome.wustl.edu	37	11	375742	375742	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf42	160298	genome.wustl.edu	37	11	6231294	6231294	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR10A3	26496	genome.wustl.edu	37	11	7960486	7960486	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2R1	120227	genome.wustl.edu	37	11	14901869	14901869	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf41	25758	genome.wustl.edu	37	11	33667382	33667382	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf55	399879	genome.wustl.edu	37	11	36293214	36293214	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCS	84680	genome.wustl.edu	37	11	44089260	44089260	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYBPC3	4607	genome.wustl.edu	37	11	47357476	47357476	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4C46	119749	genome.wustl.edu	37	11	51516153	51516153	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM48	79097	genome.wustl.edu	37	11	55032643	55032643	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5AS1	219447	genome.wustl.edu	37	11	55798648	55798648	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWCE	220001	genome.wustl.edu	37	11	61048609	61048609	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK	79026	genome.wustl.edu	37	11	62287071	62287071	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASGRP2	10235	genome.wustl.edu	37	11	64497246	64497246	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG2A	23130	genome.wustl.edu	37	11	64680848	64680848	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLA2	23649	genome.wustl.edu	37	11	65048544	65048544	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TIGD3	220359	genome.wustl.edu	37	11	65124504	65124504	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCNXL3	399909	genome.wustl.edu	37	11	65384320	65384320	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD248	57124	genome.wustl.edu	37	11	66083530	66083530	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHB1	58473	genome.wustl.edu	37	11	73371816	73371816	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM77P	390231	genome.wustl.edu	37	11	89450714	89450714	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GUCY1A2	2977	genome.wustl.edu	37	11	106647223	106647223	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HYOU1	10525	genome.wustl.edu	37	11	118920287	118920287	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBL	867	genome.wustl.edu	37	11	119149279	119149279	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWA5A	4013	genome.wustl.edu	37	11	123993796	123993796	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPUSD4	84881	genome.wustl.edu	37	11	126079498	126079498	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIRREL3	84623	genome.wustl.edu	37	11	126301254	126301254	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFRKB	4798	genome.wustl.edu	37	11	129744049	129744049	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NTM	50863	genome.wustl.edu	37	11	132016320	132016320	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM5A	5927	genome.wustl.edu	37	12	432894	432894	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNT5B	81029	genome.wustl.edu	37	12	1748946	1748946	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCAPD2	9918	genome.wustl.edu	37	12	6638150	6638150	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATN1	1822	genome.wustl.edu	37	12	7050099	7050099	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHB2	11331	genome.wustl.edu	37	12	7077108	7077108	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD69	969	genome.wustl.edu	37	12	9907414	9907414	+	RNA	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf11	55726	genome.wustl.edu	37	12	27064230	27064230	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKP2	5318	genome.wustl.edu	37	12	32994140	32994140	+	Splice_Site	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRICKLE1	144165	genome.wustl.edu	37	12	42864067	42864067	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS20	80070	genome.wustl.edu	37	12	43896021	43896021	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMIGO2	347902	genome.wustl.edu	37	12	47471515	47471515	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMNL3	91010	genome.wustl.edu	37	12	50045965	50045965	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIP2B	57609	genome.wustl.edu	37	12	51102337	51102337	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT6B	3854	genome.wustl.edu	37	12	52841743	52841743	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCBP2	5094	genome.wustl.edu	37	12	53849679	53849679	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF41	10193	genome.wustl.edu	37	12	56600559	56600559	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF41	10193	genome.wustl.edu	37	12	56601953	56601953	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAZ2A	11176	genome.wustl.edu	37	12	56997467	56997467	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPH2	121278	genome.wustl.edu	37	12	72425414	72425414	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK17	5128	genome.wustl.edu	37	12	96688813	96688813	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANO4	121601	genome.wustl.edu	37	12	101413867	101413867	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FICD	11153	genome.wustl.edu	37	12	108910879	108910879	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SART3	9733	genome.wustl.edu	37	12	108923966	108923966	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYL2	4633	genome.wustl.edu	37	12	111348947	111348947	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM19	9904	genome.wustl.edu	37	12	114380164	114380164	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF10	9921	genome.wustl.edu	37	12	120995114	120995114	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KNTC1	9735	genome.wustl.edu	37	12	123055607	123055607	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH10	196385	genome.wustl.edu	37	12	124416371	124416371	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCOR2	9612	genome.wustl.edu	37	12	124971112	124971112	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKLE2	23141	genome.wustl.edu	37	12	133303955	133303955	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIPEP	4285	genome.wustl.edu	37	13	24413829	24413829	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBEA	26960	genome.wustl.edu	37	13	35751179	35751179	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY2	115825	genome.wustl.edu	37	13	52333897	52333897	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FARP1	10160	genome.wustl.edu	37	13	99083369	99083369	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F10	2159	genome.wustl.edu	37	13	113803392	113803392	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRTP1	79774	genome.wustl.edu	37	13	114009782	114009782	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF40	55701	genome.wustl.edu	37	14	21557023	21557023	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RABGGTA	5875	genome.wustl.edu	37	14	24737769	24737769	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COCH	1690	genome.wustl.edu	37	14	31355183	31355183	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHDC2	23588	genome.wustl.edu	37	14	50249625	50249625	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBPL2	387332	genome.wustl.edu	37	14	55903277	55903277	+	Splice_Site	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTX2	5015	genome.wustl.edu	37	14	57271061	57271061	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440181	440181	genome.wustl.edu	37	14	59294794	59294794	+	RNA	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNTB	2342	genome.wustl.edu	37	14	65499337	65499337	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAD51B	5890	genome.wustl.edu	37	14	68352688	68352688	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf43	91748	genome.wustl.edu	37	14	74196630	74196630	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0317	9870	genome.wustl.edu	37	14	75151249	75151249	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIO2	1734	genome.wustl.edu	37	14	80669277	80669277	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPK1-AS1	319085	genome.wustl.edu	37	14	93537116	93537116	+	RNA	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1H1	1778	genome.wustl.edu	37	14	102452680	102452680	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLC1	3831	genome.wustl.edu	37	14	104129111	104129111	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK2	113146	genome.wustl.edu	37	14	105406202	105406202	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK2	113146	genome.wustl.edu	37	14	105408983	105408983	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PACS2	23241	genome.wustl.edu	37	14	105833628	105833628	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000227468	0	genome.wustl.edu	37	14	106066378	106066378	+	Splice_Site	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC283685	283685	genome.wustl.edu	37	15	23689139	23689139	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APBA2	321	genome.wustl.edu	37	15	29393925	29393925	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DISP2	85455	genome.wustl.edu	37	15	40661100	40661100	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGA	23269	genome.wustl.edu	37	15	41961175	41961175	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUOXA2	405753	genome.wustl.edu	37	15	45409501	45409501	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO5A	4644	genome.wustl.edu	37	15	52700261	52700261	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RFX7	64864	genome.wustl.edu	37	15	56535451	56535451	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SKOR1	390598	genome.wustl.edu	37	15	68118968	68118968	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PML	5371	genome.wustl.edu	37	15	74326969	74326969	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC727963	727963	genome.wustl.edu	37	15	84748703	84748703	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFGE8	4240	genome.wustl.edu	37	15	89453093	89453093	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRK1	79705	genome.wustl.edu	37	15	101567895	101567895	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AXIN1	8312	genome.wustl.edu	37	16	364545	364545	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DECR2	26063	genome.wustl.edu	37	16	457554	457554	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNG13	51764	genome.wustl.edu	37	16	848772	848772	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAIAP3	8938	genome.wustl.edu	37	16	1398283	1398283	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSC2	7249	genome.wustl.edu	37	16	2106650	2106650	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASKIN1	57524	genome.wustl.edu	37	16	2231893	2231893	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY9	115	genome.wustl.edu	37	16	4165113	4165113	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C16orf89	146556	genome.wustl.edu	37	16	5105323	5105323	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EMP2	2013	genome.wustl.edu	37	16	10641402	10641402	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UMOD	7369	genome.wustl.edu	37	16	20357599	20357599	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6A	27327	genome.wustl.edu	37	16	24802006	24802006	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6A	27327	genome.wustl.edu	37	16	24802899	24802899	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL4R	3566	genome.wustl.edu	37	16	27363943	27363943	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX6A2	1339	genome.wustl.edu	37	16	31439130	31439130	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHKB	5257	genome.wustl.edu	37	16	47497889	47497889	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RLTPR	146206	genome.wustl.edu	37	16	67688344	67688344	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH3	1001	genome.wustl.edu	37	16	68718593	68718593	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHTF8	54921	genome.wustl.edu	37	16	69154299	69154299	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72992124	72992124	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP10	9100	genome.wustl.edu	37	16	84806233	84806233	+	Silent	SNP	T	T	G			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK10	8558	genome.wustl.edu	37	16	89757898	89757898	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTC1	80169	genome.wustl.edu	37	17	8132526	8132526	+	Splice_Site	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIRT	644139	genome.wustl.edu	37	17	10728852	10728852	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHISA6	388336	genome.wustl.edu	37	17	11145245	11145245	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF286A	57335	genome.wustl.edu	37	17	15620340	15620340	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KSR1	8844	genome.wustl.edu	37	17	25924382	25924382	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCL4	6351	genome.wustl.edu	37	17	34431945	34431945	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR179	440435	genome.wustl.edu	37	17	36485282	36485282	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf98	388381	genome.wustl.edu	37	17	36997511	36997511	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IKZF3	22806	genome.wustl.edu	37	17	37922736	37922736	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JUP	3728	genome.wustl.edu	37	17	39923649	39923649	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL11	55175	genome.wustl.edu	37	17	40010042	40010042	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM106A	113277	genome.wustl.edu	37	17	41367829	41367829	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRHR1	1394	genome.wustl.edu	37	17	43906636	43906636	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGB3	3690	genome.wustl.edu	37	17	45368326	45368326	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBX21	30009	genome.wustl.edu	37	17	45822393	45822393	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF2B	84643	genome.wustl.edu	37	17	51901904	51901904	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR11	55771	genome.wustl.edu	37	17	57272731	57272731	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLTC	1213	genome.wustl.edu	37	17	57762561	57762561	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS9	8787	genome.wustl.edu	37	17	63189723	63189723	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIN2C	2905	genome.wustl.edu	37	17	72844061	72844061	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35G4	646000	genome.wustl.edu	37	18	11609832	11609832	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEH1L	81929	genome.wustl.edu	37	18	12955522	12955522	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASXL3	80816	genome.wustl.edu	37	18	31325494	31325494	+	Silent	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF532	55205	genome.wustl.edu	37	18	56651250	56651250	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1468	57614	genome.wustl.edu	37	18	59912058	59912058	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNG2	26251	genome.wustl.edu	37	18	77659481	77659481	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID3A	1820	genome.wustl.edu	37	19	968403	968403	+	Splice_Site	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK4	54760	genome.wustl.edu	37	19	1487673	1487673	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TJP3	27134	genome.wustl.edu	37	19	3740725	3740725	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAP2	55620	genome.wustl.edu	37	19	4328707	4328707	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARRDC5	645432	genome.wustl.edu	37	19	4891232	4891232	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF18	23370	genome.wustl.edu	37	19	7505040	7505040	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMSAP3	57662	genome.wustl.edu	37	19	7682656	7682656	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRAM1	84106	genome.wustl.edu	37	19	8563890	8563890	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC151	115948	genome.wustl.edu	37	19	11531869	11531869	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDX2	7001	genome.wustl.edu	37	19	12911043	12911043	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF333	84449	genome.wustl.edu	37	19	14829644	14829644	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM129C	199786	genome.wustl.edu	37	19	17643081	17643081	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf2	8725	genome.wustl.edu	37	19	30503327	30503327	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSHZ3	57616	genome.wustl.edu	37	19	31767980	31767980	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USF2	7392	genome.wustl.edu	37	19	35760579	35760579	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPHS1	4868	genome.wustl.edu	37	19	36336316	36336316	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLIP3	25999	genome.wustl.edu	37	19	36517548	36517548	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX7A1	1346	genome.wustl.edu	37	19	36642647	36642647	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAMD4B	55095	genome.wustl.edu	37	19	39871333	39871333	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG2	64857	genome.wustl.edu	37	19	39913534	39913534	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRX	57716	genome.wustl.edu	37	19	40902660	40902660	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC97	90324	genome.wustl.edu	37	19	41828581	41828581	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIC	23152	genome.wustl.edu	37	19	42795134	42795134	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEGF8	1954	genome.wustl.edu	37	19	42848154	42848154	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEACAM19	56971	genome.wustl.edu	37	19	45179563	45179563	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLASRP	11129	genome.wustl.edu	37	19	45563845	45563845	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKPD1	284353	genome.wustl.edu	37	19	45656197	45656197	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP5C	5536	genome.wustl.edu	37	19	46893580	46893580	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R15A	23645	genome.wustl.edu	37	19	49379179	49379179	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEAD2	8463	genome.wustl.edu	37	19	49862735	49862735	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH16A1	126133	genome.wustl.edu	37	19	49967456	49967456	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLK10	5655	genome.wustl.edu	37	19	51519333	51519333	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF611	81856	genome.wustl.edu	37	19	53209631	53209631	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF765	91661	genome.wustl.edu	37	19	53911669	53911669	+	Silent	SNP	A	A	T			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A11	83959	genome.wustl.edu	37	20	3209351	3209351	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLGAP4	22839	genome.wustl.edu	37	20	35060658	35060658	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMS4	140730	genome.wustl.edu	37	20	43384832	43384832	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WFDC5	149708	genome.wustl.edu	37	20	43738576	43738576	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35C2	51006	genome.wustl.edu	37	20	44983551	44983551	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf123	128506	genome.wustl.edu	37	20	45170455	45170455	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SALL4	57167	genome.wustl.edu	37	20	50407931	50407931	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSHZ2	128553	genome.wustl.edu	37	20	51870611	51870611	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIK1	2897	genome.wustl.edu	37	21	30953854	30953854	+	Silent	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNJ1	8867	genome.wustl.edu	37	21	34072284	34072284	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC19A1	6573	genome.wustl.edu	37	21	46951391	46951391	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL6A2	1292	genome.wustl.edu	37	21	47545866	47545866	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGCR8	54487	genome.wustl.edu	37	22	20077734	20077734	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RTDR1	27156	genome.wustl.edu	37	22	23401731	23401731	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC5A4	6527	genome.wustl.edu	37	22	32630892	32630892	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC42EP1	11135	genome.wustl.edu	37	22	37962729	37962729	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
H1F0	3005	genome.wustl.edu	37	22	38201781	38201781	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBX7	23492	genome.wustl.edu	37	22	39530030	39530030	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAGA	4668	genome.wustl.edu	37	22	42463260	42463260	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRELD2	79174	genome.wustl.edu	37	22	50313456	50313456	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDAC10	83933	genome.wustl.edu	37	22	50686525	50686525	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAPK8IP2	23542	genome.wustl.edu	37	22	51042077	51042077	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198763	0	genome.wustl.edu	37	MT	5046	5046	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPM6B	2824	genome.wustl.edu	37	X	13791103	13791103	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZRSR2	8233	genome.wustl.edu	37	X	15838412	15838412	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM47A	158724	genome.wustl.edu	37	X	34148214	34148214	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM47B	170062	genome.wustl.edu	37	X	34961523	34961523	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM47B	170062	genome.wustl.edu	37	X	34961705	34961705	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRPX	8406	genome.wustl.edu	37	X	38019347	38019347	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39922122	39922122	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAOB	4129	genome.wustl.edu	37	X	43656379	43656379	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUSP21	63904	genome.wustl.edu	37	X	44703624	44703624	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF81	347344	genome.wustl.edu	37	X	47775781	47775781	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPKOW	27238	genome.wustl.edu	37	X	48976078	48976078	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC1A	8243	genome.wustl.edu	37	X	53432426	53432426	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAGE5	90737	genome.wustl.edu	37	X	55247058	55247058	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AR	367	genome.wustl.edu	37	X	66863242	66863242	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF4A	24137	genome.wustl.edu	37	X	69607097	69607097	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHIC1	53344	genome.wustl.edu	37	X	72783203	72783203	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRWD3	254065	genome.wustl.edu	37	X	79988955	79988955	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRMT2B	79979	genome.wustl.edu	37	X	100276155	100276155	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288324	100288324	genome.wustl.edu	37	X	110653417	110653417	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMOT	154796	genome.wustl.edu	37	X	112065826	112065826	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A14	11254	genome.wustl.edu	37	X	115588909	115588909	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKAP	79576	genome.wustl.edu	37	X	119070643	119070643	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ1	10178	genome.wustl.edu	37	X	123519701	123519701	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ1	10178	genome.wustl.edu	37	X	123699281	123699281	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCORL1	63035	genome.wustl.edu	37	X	129147462	129147462	+	Silent	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMX2	51634	genome.wustl.edu	37	X	129546701	129546701	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAMLD1	10046	genome.wustl.edu	37	X	149638421	149638421	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NSDHL	50814	genome.wustl.edu	37	X	152031181	152031181	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IDH3G	3421	genome.wustl.edu	37	X	153055275	153055275	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCFC1	3054	genome.wustl.edu	37	X	153218062	153218062	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCFC1	3054	genome.wustl.edu	37	X	153221675	153221675	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXTL1	2134	genome.wustl.edu	37	1	26360331	26360331	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CC2D1B	200014	genome.wustl.edu	37	1	52824748	52824748	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYST	1130	genome.wustl.edu	37	1	235966234	235966234	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFTPH	54812	genome.wustl.edu	37	2	64779742	64779742	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYEOV2	150678	genome.wustl.edu	37	2	241069366	241069366	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAPN7	23473	genome.wustl.edu	37	3	15283703	15283703	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBA6	55236	genome.wustl.edu	37	4	68490836	68490836	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB8	56128	genome.wustl.edu	37	5	140559035	140559035	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB12	56124	genome.wustl.edu	37	5	140589252	140589252	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB18	54660	genome.wustl.edu	37	5	140614263	140614263	+	RNA	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGC3	5098	genome.wustl.edu	37	5	140857253	140857253	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GABRA6	2559	genome.wustl.edu	37	5	161116280	161116280	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2AG	8969	genome.wustl.edu	37	6	27101067	27101067	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HLA-F	3134	genome.wustl.edu	37	6	29691344	29691344	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP39A1	51302	genome.wustl.edu	37	6	46554859	46554859	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM83B	222584	genome.wustl.edu	37	6	54805765	54805765	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSPYL1	7259	genome.wustl.edu	37	6	116599879	116599879	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HBS1L	10767	genome.wustl.edu	37	6	135308817	135308817	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM181	57583	genome.wustl.edu	37	6	159044628	159044628	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100129321	100129321	genome.wustl.edu	37	7	39874067	39874067	+	RNA	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIMK1	3984	genome.wustl.edu	37	7	73535328	73535328	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF2IRD1	9569	genome.wustl.edu	37	7	73927263	73927263	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB1	5243	genome.wustl.edu	37	7	87196162	87196162	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCP	375616	genome.wustl.edu	37	7	128543861	128543861	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PODXL	5420	genome.wustl.edu	37	7	131191402	131191402	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLC1	10395	genome.wustl.edu	37	8	12956878	12956878	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HR	55806	genome.wustl.edu	37	8	21978271	21978271	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FZD3	7976	genome.wustl.edu	37	8	28385184	28385184	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARC	23237	genome.wustl.edu	37	8	143694599	143694599	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC39B	158219	genome.wustl.edu	37	9	15192657	15192657	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389740	389740	genome.wustl.edu	37	9	66517893	66517893	+	RNA	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FKTN	2218	genome.wustl.edu	37	9	108377629	108377629	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCNXL3	399909	genome.wustl.edu	37	11	65389747	65389747	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO7A	4647	genome.wustl.edu	37	11	76890854	76890854	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAG1	5571	genome.wustl.edu	37	12	49398773	49398773	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STX2	2054	genome.wustl.edu	37	12	131286011	131286011	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFSWAP	6433	genome.wustl.edu	37	12	132237815	132237815	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HS6ST3	266722	genome.wustl.edu	37	13	97485291	97485291	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf176	643382	genome.wustl.edu	37	14	21570651	21570651	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF11	80344	genome.wustl.edu	37	14	24590630	24590630	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKD1	5587	genome.wustl.edu	37	14	30103720	30103720	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGAT2	4247	genome.wustl.edu	37	14	50088757	50088757	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf101	54916	genome.wustl.edu	37	14	57085357	57085357	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHV2-5	28457	genome.wustl.edu	37	14	106494138	106494138	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2	8924	genome.wustl.edu	37	15	28517496	28517496	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZSCAN10	84891	genome.wustl.edu	37	16	3142762	3142762	+	Silent	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NECAB2	54550	genome.wustl.edu	37	16	84034339	84034339	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF213	57674	genome.wustl.edu	37	17	78311744	78311744	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH2	1000	genome.wustl.edu	37	18	25532205	25532205	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FHOD3	80206	genome.wustl.edu	37	18	34335182	34335182	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIRREL2	84063	genome.wustl.edu	37	19	36352463	36352463	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HRC	3270	genome.wustl.edu	37	19	49657496	49657496	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC11	114132	genome.wustl.edu	37	19	50463829	50463829	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
YTHDF1	54915	genome.wustl.edu	37	20	61833787	61833787	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TIAM1	7074	genome.wustl.edu	37	21	32492822	32492822	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C21orf58	54058	genome.wustl.edu	37	21	47737159	47737159	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMTN	6525	genome.wustl.edu	37	22	31486113	31486113	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR5	55615	genome.wustl.edu	37	22	45132772	45132772	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC38A5	92745	genome.wustl.edu	37	X	48319117	48319117	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAGE8	100101629	genome.wustl.edu	37	X	49208300	49208300	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKK	139189	genome.wustl.edu	37	X	50129486	50129486	+	Silent	SNP	G	G	A			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MID2	11043	genome.wustl.edu	37	X	107084522	107084522	+	Silent	SNP	T	T	C			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZIC3	7547	genome.wustl.edu	37	X	136649225	136649225	+	Silent	SNP	C	C	T			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27101278	27101278	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSF3R	1441	genome.wustl.edu	37	1	36935323	36935323	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCH2	8643	genome.wustl.edu	37	1	45288194	45288194	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOOK1	51361	genome.wustl.edu	37	1	60309213	60309214	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK1	3716	genome.wustl.edu	37	1	65330610	65330611	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GEMIN8P4	492303	genome.wustl.edu	37	1	90459162	90459162	+	RNA	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMY1A	276	genome.wustl.edu	37	1	104203106	104203107	+	Splice_Site	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOC	389	genome.wustl.edu	37	1	113245680	113245681	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-D1-A163-01	TCGA-D1-A163-01	GA	GA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGA10	8515	genome.wustl.edu	37	1	145532597	145532599	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-D1-A163-01	TCGA-D1-A163-01	AGG	AGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAGLN2	8407	genome.wustl.edu	37	1	159889464	159889465	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-D1-A163-01	TCGA-D1-A163-01	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRELP	5549	genome.wustl.edu	37	1	203452549	203452549	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDM4	4194	genome.wustl.edu	37	1	204507121	204507121	+	Splice_Site	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAP2	8853	genome.wustl.edu	37	2	9540927	9540927	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP4K4	9448	genome.wustl.edu	37	2	102452432	102452432	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP2	5903	genome.wustl.edu	37	2	109380063	109380064	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-D1-A163-01	TCGA-D1-A163-01	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFIH1	64135	genome.wustl.edu	37	2	163137959	163137959	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC344328	344328	genome.wustl.edu	37	2	188690181	188690181	+	RNA	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729141	729141	genome.wustl.edu	37	2	189092280	189092282	+	RNA	DEL	AGA	AGA	-			TCGA-D1-A163-01	TCGA-D1-A163-01	AGA	AGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGOL2	151246	genome.wustl.edu	37	2	201438257	201438259	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-D1-A163-01	TCGA-D1-A163-01	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDBF2	57683	genome.wustl.edu	37	2	207174428	207174428	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IDH1	3417	genome.wustl.edu	37	2	209116263	209116263	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEG	10290	genome.wustl.edu	37	2	220348876	220348876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP5D	3635	genome.wustl.edu	37	2	234077967	234077967	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGXT	189	genome.wustl.edu	37	2	241808308	241808308	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAD18	56852	genome.wustl.edu	37	3	8954044	8954045	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLEC1	9940	genome.wustl.edu	37	3	38104190	38104191	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TWF2	11344	genome.wustl.edu	37	3	52265167	52265168	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-D1-A163-01	TCGA-D1-A163-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM110	375346	genome.wustl.edu	37	3	52886709	52886709	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTR1F	3355	genome.wustl.edu	37	3	88040823	88040823	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SENP7	57337	genome.wustl.edu	37	3	101070484	101070484	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LSG1	55341	genome.wustl.edu	37	3	194362836	194362836	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC19	131540	genome.wustl.edu	37	3	195925174	195925174	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CENPC1	1060	genome.wustl.edu	37	4	68384936	68384936	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH3RF1	57630	genome.wustl.edu	37	4	170057667	170057668	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL7R	3575	genome.wustl.edu	37	5	35867541	35867541	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPBL	25836	genome.wustl.edu	37	5	36984974	36984974	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6	729	genome.wustl.edu	37	5	41181560	41181560	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMGCR	3156	genome.wustl.edu	37	5	74647285	74647285	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MSH3	4437	genome.wustl.edu	37	5	79970915	79970915	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLA2G7	7941	genome.wustl.edu	37	6	46677134	46677134	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMAP1	60682	genome.wustl.edu	37	6	71546674	71546674	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTK	7272	genome.wustl.edu	37	6	80720630	80720630	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ORC3	23595	genome.wustl.edu	37	6	88304098	88304098	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf174	387104	genome.wustl.edu	37	6	127837038	127837038	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH8A1	64577	genome.wustl.edu	37	6	135239640	135239640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LATS1	9113	genome.wustl.edu	37	6	150004239	150004239	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE10A	10846	genome.wustl.edu	37	6	165844962	165844963	+	Splice_Site	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAR1B	5575	genome.wustl.edu	37	7	720281	720281	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAR1B	5575	genome.wustl.edu	37	7	720344	720344	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000248675	0	genome.wustl.edu	37	7	10491542	10491542	+	RNA	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOXA3	3200	genome.wustl.edu	37	7	27148053	27148053	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000213530	0	genome.wustl.edu	37	7	82219160	82219160	+	Splice_Site	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZKSCAN1	7586	genome.wustl.edu	37	7	99631749	99631750	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-D1-A163-01	TCGA-D1-A163-01	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUX1	1523	genome.wustl.edu	37	7	101845358	101845358	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUS7	54517	genome.wustl.edu	37	7	105148864	105148864	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM8	2918	genome.wustl.edu	37	7	126173278	126173278	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF800	168850	genome.wustl.edu	37	7	127017334	127017334	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP2	26047	genome.wustl.edu	37	7	147815318	147815318	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LMBR1	64327	genome.wustl.edu	37	7	156589159	156589160	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX15	56154	genome.wustl.edu	37	8	30702391	30702391	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR5	51366	genome.wustl.edu	37	8	103266697	103266699	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-D1-A163-01	TCGA-D1-A163-01	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	113241029	113241029	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPD52L3	89882	genome.wustl.edu	37	9	6328766	6328767	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTLN	54875	genome.wustl.edu	37	9	17135271	17135271	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RECK	8434	genome.wustl.edu	37	9	36112460	36112461	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF2	5253	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC34A3	142680	genome.wustl.edu	37	9	140128120	140128121	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR602	693187	genome.wustl.edu	37	9	140732961	140732961	+	RNA	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX50	79009	genome.wustl.edu	37	10	70673881	70673882	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0913	23053	genome.wustl.edu	37	10	75553466	75553466	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0913	23053	genome.wustl.edu	37	10	75558056	75558056	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0913	23053	genome.wustl.edu	37	10	75560464	75560464	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRID1	2894	genome.wustl.edu	37	10	87407132	87407133	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720811	89720812	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP55	55165	genome.wustl.edu	37	10	95276744	95276744	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHRF1	57661	genome.wustl.edu	37	11	608263	608263	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARS	833	genome.wustl.edu	37	11	3023250	3023251	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QSER1	79832	genome.wustl.edu	37	11	32997895	32997895	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC3A2	6520	genome.wustl.edu	37	11	62649529	62649529	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYVN1	84447	genome.wustl.edu	37	11	64899850	64899850	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACY3	91703	genome.wustl.edu	37	11	67412277	67412278	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPPL1	3636	genome.wustl.edu	37	11	71948748	71948748	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF17	9828	genome.wustl.edu	37	11	73021527	73021527	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC2H1	79659	genome.wustl.edu	37	11	103325933	103325933	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1826	84437	genome.wustl.edu	37	11	105880756	105880756	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXM1	2305	genome.wustl.edu	37	12	2968088	2968088	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTBR	4055	genome.wustl.edu	37	12	6495298	6495298	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000248116	0	genome.wustl.edu	37	12	19460408	19460408	+	RNA	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAT1	586	genome.wustl.edu	37	12	24989523	24989525	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-D1-A163-01	TCGA-D1-A163-01	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM186A	121006	genome.wustl.edu	37	12	50725545	50725546	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBX5	23468	genome.wustl.edu	37	12	54645831	54645832	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR84	53831	genome.wustl.edu	37	12	54757554	54757554	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYF6	4618	genome.wustl.edu	37	12	81101717	81101717	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf29	91298	genome.wustl.edu	37	12	88437378	88437378	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP290	80184	genome.wustl.edu	37	12	88524079	88524079	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000222932	0	genome.wustl.edu	37	12	102190270	102190270	+	RNA	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CABP1	9478	genome.wustl.edu	37	12	121093634	121093635	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-D1-A163-01	TCGA-D1-A163-01	GT	GT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNF1A	6927	genome.wustl.edu	37	12	121416697	121416697	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FARP1	10160	genome.wustl.edu	37	13	99098439	99098441	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-D1-A163-01	TCGA-D1-A163-01	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf28	122525	genome.wustl.edu	37	14	45369723	45369724	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf50	145376	genome.wustl.edu	37	14	65035126	65035126	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLST	1743	genome.wustl.edu	37	14	75365107	75365108	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GABRB3	2562	genome.wustl.edu	37	15	26828515	26828515	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TJP1	7082	genome.wustl.edu	37	15	30025340	30025340	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C15orf44	81556	genome.wustl.edu	37	15	65877176	65877176	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000242982	0	genome.wustl.edu	37	15	72338002	72338002	+	RNA	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGFALS	3483	genome.wustl.edu	37	16	1842147	1842147	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TXNDC11	51061	genome.wustl.edu	37	16	11785647	11785648	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67645338	67645339	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72991666	72991666	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAR1	9564	genome.wustl.edu	37	16	75269553	75269553	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKD1L2	114780	genome.wustl.edu	37	16	81181814	81181814	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO1C	4641	genome.wustl.edu	37	17	1384171	1384171	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF5A	1984	genome.wustl.edu	37	17	7210378	7210378	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD3	1107	genome.wustl.edu	37	17	7798765	7798765	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALOX12B	242	genome.wustl.edu	37	17	7979987	7979987	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCOR1	9611	genome.wustl.edu	37	17	16029456	16029457	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A163-01	TCGA-D1-A163-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287245	100287245	genome.wustl.edu	37	17	30762336	30762336	+	RNA	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COASY	80347	genome.wustl.edu	37	17	40715173	40715173	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1267	284058	genome.wustl.edu	37	17	44109601	44109601	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC8	147138	genome.wustl.edu	37	17	76128558	76128558	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC30	339291	genome.wustl.edu	37	18	7232028	7232028	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFG3L2	10939	genome.wustl.edu	37	18	12370885	12370885	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH19	28513	genome.wustl.edu	37	18	64211957	64211957	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB2	9667	genome.wustl.edu	37	19	5587282	5587282	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf66	55337	genome.wustl.edu	37	19	10202224	10202224	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCTD15	79047	genome.wustl.edu	37	19	34292140	34292140	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR12	57479	genome.wustl.edu	37	19	50098808	50098808	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF5	22809	genome.wustl.edu	37	19	50434211	50434211	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC10	89790	genome.wustl.edu	37	19	51918205	51918205	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM83D	81610	genome.wustl.edu	37	20	37580943	37580943	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCAF4	57466	genome.wustl.edu	37	21	33073336	33073336	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGPAT3	56894	genome.wustl.edu	37	21	45387993	45387993	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC8	29801	genome.wustl.edu	37	22	20128972	20128972	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED15	51586	genome.wustl.edu	37	22	20936976	20936976	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEB3	4114	genome.wustl.edu	37	X	30254159	30254159	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A163-01	TCGA-D1-A163-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEB16	139604	genome.wustl.edu	37	X	35820704	35820704	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3H12B	340554	genome.wustl.edu	37	X	64722644	64722644	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A163-01	TCGA-D1-A163-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BHLHB9	80823	genome.wustl.edu	37	X	102003967	102003967	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A163-01	TCGA-D1-A163-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA3	55558	genome.wustl.edu	37	X	153694764	153694764	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A163-01	TCGA-D1-A163-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
