Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ZMYM6	9204	genome.wustl.edu	37	1	35476599	35476599	+	Silent	SNP	C	C	G			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MACF1	23499	genome.wustl.edu	37	1	39838158	39838158	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A168-01	TCGA-D1-A168-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43904382	43904382	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR2	1952	genome.wustl.edu	37	1	109793851	109793851	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F5	2153	genome.wustl.edu	37	1	169498898	169498898	+	Silent	SNP	T	T	C			TCGA-D1-A168-01	TCGA-D1-A168-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RABGAP1L	9910	genome.wustl.edu	37	1	174210688	174210688	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGFN1	91156	genome.wustl.edu	37	1	201181883	201181883	+	Silent	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH2A	7399	genome.wustl.edu	37	1	216373152	216373152	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMN2	56776	genome.wustl.edu	37	1	240371223	240371223	+	Silent	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2M4	26245	genome.wustl.edu	37	1	248402903	248402903	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MXD1	4084	genome.wustl.edu	37	2	70164448	70164448	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BBS5	129880	genome.wustl.edu	37	2	170349400	170349400	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A168-01	TCGA-D1-A168-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL3A1	1281	genome.wustl.edu	37	2	189856426	189856426	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIKFYVE	200576	genome.wustl.edu	37	2	209167007	209167007	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROBO2	6092	genome.wustl.edu	37	3	77607268	77607268	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131360	100131360	genome.wustl.edu	37	3	195724189	195724189	+	RNA	SNP	T	T	G			TCGA-D1-A168-01	TCGA-D1-A168-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SENP5	205564	genome.wustl.edu	37	3	196626857	196626857	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROM1	8842	genome.wustl.edu	37	4	16035059	16035059	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A168-01	TCGA-D1-A168-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4orf14	84273	genome.wustl.edu	37	4	57830593	57830593	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT4	79633	genome.wustl.edu	37	4	126337624	126337624	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UFSP2	55325	genome.wustl.edu	37	4	186339751	186339751	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT2	2196	genome.wustl.edu	37	5	150908759	150908759	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRFN2	57497	genome.wustl.edu	37	6	40360309	40360309	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STXBP5	134957	genome.wustl.edu	37	6	147646170	147646170	+	Silent	SNP	A	A	G			TCGA-D1-A168-01	TCGA-D1-A168-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCP10L2	401285	genome.wustl.edu	37	6	167585711	167585711	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOD1	10392	genome.wustl.edu	37	7	30491197	30491197	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMPER	168667	genome.wustl.edu	37	7	34118743	34118743	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM213	155006	genome.wustl.edu	37	7	138486104	138486104	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP7A1	1581	genome.wustl.edu	37	8	59409582	59409582	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SULF1	23213	genome.wustl.edu	37	8	70536308	70536308	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PEX2	5828	genome.wustl.edu	37	8	77895794	77895794	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNK2	65268	genome.wustl.edu	37	9	95992058	95992058	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D2	55357	genome.wustl.edu	37	9	101006390	101006390	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A168-01	TCGA-D1-A168-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1B	774	genome.wustl.edu	37	9	141015984	141015984	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131416	100131416	genome.wustl.edu	37	11	64877427	64877427	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PELI3	246330	genome.wustl.edu	37	11	66241248	66241248	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A168-01	TCGA-D1-A168-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT3	120114	genome.wustl.edu	37	11	92613994	92613994	+	Silent	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROBO4	54538	genome.wustl.edu	37	11	124763783	124763783	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398281	25398281	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACVR1B	91	genome.wustl.edu	37	12	52374786	52374786	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57566958	57566958	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf42	374470	genome.wustl.edu	37	12	103872202	103872202	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A1	1282	genome.wustl.edu	37	13	110818594	110818594	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ING1	3621	genome.wustl.edu	37	13	111372025	111372025	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPF3	8110	genome.wustl.edu	37	14	73198520	73198520	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A168-01	TCGA-D1-A168-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO1E	4643	genome.wustl.edu	37	15	59523959	59523959	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440311	440311	genome.wustl.edu	37	15	95398860	95398860	+	RNA	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGAX	3687	genome.wustl.edu	37	16	31373450	31373450	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2P4	440362	genome.wustl.edu	37	16	32163473	32163473	+	RNA	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WSCD1	23302	genome.wustl.edu	37	17	6023636	6023636	+	Silent	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASGR2	433	genome.wustl.edu	37	17	7005500	7005500	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATPAF2	91647	genome.wustl.edu	37	17	17924457	17924457	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1267	284058	genome.wustl.edu	37	17	44110560	44110560	+	Splice_Site	SNP	T	T	A			TCGA-D1-A168-01	TCGA-D1-A168-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPOP	8405	genome.wustl.edu	37	17	47696716	47696716	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED16	10025	genome.wustl.edu	37	19	875396	875396	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF738	148203	genome.wustl.edu	37	19	21569374	21569374	+	RNA	SNP	G	G	T			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLK11	11012	genome.wustl.edu	37	19	51527512	51527512	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A7	84679	genome.wustl.edu	37	X	46502752	46502752	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NONO	4841	genome.wustl.edu	37	X	70511818	70511818	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCD1	215	genome.wustl.edu	37	X	152991142	152991142	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEG	10290	genome.wustl.edu	37	2	220347892	220347892	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAIAP3	8938	genome.wustl.edu	37	16	1396451	1396451	+	Silent	SNP	C	C	T			TCGA-D1-A168-01	TCGA-D1-A168-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF112	7732	genome.wustl.edu	37	17	19318389	19318389	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27087447	27087447	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A168-01	TCGA-D1-A168-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNRNPAB	3182	genome.wustl.edu	37	5	177636363	177636364	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A168-01	TCGA-D1-A168-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
