Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
PLCH2	9651	genome.wustl.edu	37	1	2430589	2430589	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP73	7161	genome.wustl.edu	37	1	3647612	3647612	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR153	387509	genome.wustl.edu	37	1	6311467	6311467	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG5	57449	genome.wustl.edu	37	1	6556583	6556583	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFFO2	126917	genome.wustl.edu	37	1	19244897	19244897	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43890851	43890851	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLF17	128209	genome.wustl.edu	37	1	44595294	44595294	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMBX1	127343	genome.wustl.edu	37	1	46976789	46976789	+	Silent	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4Z2P	163720	genome.wustl.edu	37	1	47325382	47325382	+	RNA	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OMA1	115209	genome.wustl.edu	37	1	59004899	59004899	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KANK4	163782	genome.wustl.edu	37	1	62734001	62734001	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEPDC1	55635	genome.wustl.edu	37	1	68960179	68960179	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYPL2	284612	genome.wustl.edu	37	1	110019440	110019440	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRNN	49860	genome.wustl.edu	37	1	152382484	152382484	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132108	100132108	genome.wustl.edu	37	1	155815759	155815759	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FCRL3	115352	genome.wustl.edu	37	1	157660172	157660172	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1E	777	genome.wustl.edu	37	1	181702838	181702838	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LBR	3930	genome.wustl.edu	37	1	225600156	225600156	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS54	51542	genome.wustl.edu	37	2	64211063	64211063	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIPT1	51601	genome.wustl.edu	37	2	99778981	99778981	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL36G	56300	genome.wustl.edu	37	2	113742477	113742477	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROC	5624	genome.wustl.edu	37	2	128186211	128186211	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POTEF	728378	genome.wustl.edu	37	2	130832835	130832835	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP5	344148	genome.wustl.edu	37	2	133540096	133540096	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN7A	6332	genome.wustl.edu	37	2	167322299	167322299	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIRP2	129446	genome.wustl.edu	37	2	168100553	168100553	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC150	284992	genome.wustl.edu	37	2	197596875	197596875	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDUFB3	4709	genome.wustl.edu	37	2	201950287	201950287	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC80	285175	genome.wustl.edu	37	2	210685260	210685260	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAX3	5077	genome.wustl.edu	37	2	223161771	223161771	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFF	56947	genome.wustl.edu	37	2	228207512	228207512	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP5D	3635	genome.wustl.edu	37	2	234107008	234107008	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TGFBR2	7048	genome.wustl.edu	37	3	30713718	30713718	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTN3	5067	genome.wustl.edu	37	3	74344350	74344350	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VGLL3	389136	genome.wustl.edu	37	3	87027908	87027908	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPICE1	152185	genome.wustl.edu	37	3	113175984	113175984	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ILDR1	286676	genome.wustl.edu	37	3	121720592	121720592	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729375	729375	genome.wustl.edu	37	3	129817922	129817922	+	RNA	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPNE4	131034	genome.wustl.edu	37	3	131418796	131418796	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KY	339855	genome.wustl.edu	37	3	134339693	134339693	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DBR1	51163	genome.wustl.edu	37	3	137886125	137886125	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GYG1	2992	genome.wustl.edu	37	3	148714147	148714147	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHOX2	6474	genome.wustl.edu	37	3	157823754	157823754	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLITRK3	22865	genome.wustl.edu	37	3	164906156	164906156	+	Silent	SNP	T	T	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916876	178916876	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LPP	4026	genome.wustl.edu	37	3	188426172	188426172	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGM2	55276	genome.wustl.edu	37	4	37836241	37836241	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ3	55714	genome.wustl.edu	37	4	183710518	183710518	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP72	55722	genome.wustl.edu	37	5	637731	637731	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH5	1767	genome.wustl.edu	37	5	13867994	13867994	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE4D	5144	genome.wustl.edu	37	5	58511763	58511763	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD31	256006	genome.wustl.edu	37	5	74450170	74450170	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM173	340061	genome.wustl.edu	37	5	138855863	138855863	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA1	56147	genome.wustl.edu	37	5	140168136	140168136	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB7	56099	genome.wustl.edu	37	5	140798879	140798879	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGC5	56097	genome.wustl.edu	37	5	140871422	140871422	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FCHSD1	89848	genome.wustl.edu	37	5	141027590	141027590	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF44	22838	genome.wustl.edu	37	5	175958573	175958573	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSP	1832	genome.wustl.edu	37	6	7580345	7580345	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UHRF1BP1	54887	genome.wustl.edu	37	6	34825153	34825153	+	Silent	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf126	389383	genome.wustl.edu	37	6	35745300	35745300	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDUFAF4	29078	genome.wustl.edu	37	6	97345675	97345675	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROS1	6098	genome.wustl.edu	37	6	117662779	117662779	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STXBP5	134957	genome.wustl.edu	37	6	147525815	147525815	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf97	80129	genome.wustl.edu	37	6	151939086	151939086	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGF2R	3482	genome.wustl.edu	37	6	160500626	160500626	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXK1	221937	genome.wustl.edu	37	7	4800735	4800735	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FERD3L	222894	genome.wustl.edu	37	7	19184597	19184597	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHKG1	5260	genome.wustl.edu	37	7	56149625	56149625	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF716	441234	genome.wustl.edu	37	7	57528628	57528628	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DBF4	10926	genome.wustl.edu	37	7	87530094	87530094	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXP2	93986	genome.wustl.edu	37	7	114271582	114271582	+	Splice_Site	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSPO	23145	genome.wustl.edu	37	7	149492400	149492400	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RP1L1	94137	genome.wustl.edu	37	8	10466259	10466259	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIWIL2	55124	genome.wustl.edu	37	8	22136972	22136972	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAK16	84549	genome.wustl.edu	37	8	33347842	33347842	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPNE3	8895	genome.wustl.edu	37	8	87568446	87568446	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KANK1	23189	genome.wustl.edu	37	9	738367	738367	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf23	138716	genome.wustl.edu	37	9	34611203	34611203	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHC3	53358	genome.wustl.edu	37	9	91690037	91690037	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FSD1L	83856	genome.wustl.edu	37	9	108230528	108230528	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPPA	5069	genome.wustl.edu	37	9	118950237	118950237	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OLFM1	10439	genome.wustl.edu	37	9	138011764	138011764	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMSAP1	157922	genome.wustl.edu	37	9	138712840	138712840	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR37	22884	genome.wustl.edu	37	10	1123944	1123944	+	Splice_Site	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AIFM2	84883	genome.wustl.edu	37	10	71880342	71880342	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH23	64072	genome.wustl.edu	37	10	73464766	73464766	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720670	89720670	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIPM	340654	genome.wustl.edu	37	10	90562724	90562724	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDZD8	118987	genome.wustl.edu	37	10	119043399	119043399	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARAP1	116985	genome.wustl.edu	37	11	72406085	72406085	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf88	399949	genome.wustl.edu	37	11	111407527	111407527	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIXDC1	85458	genome.wustl.edu	37	11	111864294	111864294	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTMS	5763	genome.wustl.edu	37	12	6879330	6879330	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPS8	2059	genome.wustl.edu	37	12	15834226	15834226	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL8	114882	genome.wustl.edu	37	12	76769071	76769071	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACACB	32	genome.wustl.edu	37	12	109704126	109704126	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDSL	113675	genome.wustl.edu	37	12	113866973	113866973	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX37	57647	genome.wustl.edu	37	12	125437064	125437064	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMBP2	23504	genome.wustl.edu	37	12	130921588	130921588	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO16	23026	genome.wustl.edu	37	13	109365071	109365071	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC39A9	55334	genome.wustl.edu	37	14	69866089	69866089	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHSA1	10598	genome.wustl.edu	37	14	77929019	77929019	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC24A4	123041	genome.wustl.edu	37	14	92909078	92909078	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R5C	5527	genome.wustl.edu	37	14	102384272	102384272	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2	8924	genome.wustl.edu	37	15	28473477	28473477	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2	8924	genome.wustl.edu	37	15	28493757	28493757	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF770	54989	genome.wustl.edu	37	15	35275533	35275533	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EID1	23741	genome.wustl.edu	37	15	49170530	49170530	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPRL3	8131	genome.wustl.edu	37	16	142708	142708	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAP1	10131	genome.wustl.edu	37	16	3721734	3721734	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C16orf92	146378	genome.wustl.edu	37	16	30035326	30035326	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KATNB1	10300	genome.wustl.edu	37	16	57787372	57787372	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A5	6553	genome.wustl.edu	37	16	67292325	67292325	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGRP	181	genome.wustl.edu	37	16	67516618	67516618	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX4I1	1327	genome.wustl.edu	37	16	85839355	85839355	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTHFSD	64779	genome.wustl.edu	37	16	86585863	86585863	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0664	23277	genome.wustl.edu	37	17	2601268	2601268	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNS	1497	genome.wustl.edu	37	17	3558526	3558526	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKFY1	51479	genome.wustl.edu	37	17	4085525	4085525	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH8	4626	genome.wustl.edu	37	17	10293859	10293859	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH8	4626	genome.wustl.edu	37	17	10323417	10323417	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TADA2A	6871	genome.wustl.edu	37	17	35825640	35825640	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RARA	5914	genome.wustl.edu	37	17	38506177	38506177	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FZD2	2535	genome.wustl.edu	37	17	42635787	42635787	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAPT	4137	genome.wustl.edu	37	17	44087690	44087690	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KPNB1	3837	genome.wustl.edu	37	17	45754460	45754460	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA6	23460	genome.wustl.edu	37	17	67084318	67084318	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0195	9772	genome.wustl.edu	37	17	73488745	73488745	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF558	148156	genome.wustl.edu	37	19	8932718	8932718	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
S1PR2	9294	genome.wustl.edu	37	19	10334939	10334939	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOTCH3	4854	genome.wustl.edu	37	19	15285055	15285055	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIB3	117286	genome.wustl.edu	37	19	16275663	16275663	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO9B	4650	genome.wustl.edu	37	19	17305633	17305633	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PBX4	80714	genome.wustl.edu	37	19	19672883	19672883	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF43	7594	genome.wustl.edu	37	19	21990990	21990990	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBA2	10054	genome.wustl.edu	37	19	34960032	34960032	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR1	6261	genome.wustl.edu	37	19	38959616	38959616	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPL	390928	genome.wustl.edu	37	19	39589194	39589194	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYMPK	8189	genome.wustl.edu	37	19	46338404	46338404	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAT2	587	genome.wustl.edu	37	19	49299964	49299964	+	Silent	SNP	C	C	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF615	284370	genome.wustl.edu	37	19	52497257	52497257	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBBP9	10741	genome.wustl.edu	37	20	18476489	18476489	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBD	7056	genome.wustl.edu	37	20	23028510	23028510	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIK1	2897	genome.wustl.edu	37	21	31066220	31066220	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCFC1	94104	genome.wustl.edu	37	21	34134467	34134467	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED15	51586	genome.wustl.edu	37	22	20937674	20937674	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFI1	9814	genome.wustl.edu	37	22	32000374	32000374	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARSH	347527	genome.wustl.edu	37	X	2933377	2933377	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR64	10149	genome.wustl.edu	37	X	19058338	19058338	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNKSR2	22866	genome.wustl.edu	37	X	21667020	21667020	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEB6	158809	genome.wustl.edu	37	X	26212647	26212647	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729275	729275	genome.wustl.edu	37	X	48433430	48433430	+	RNA	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX12	29934	genome.wustl.edu	37	X	70288021	70288021	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389873	389873	genome.wustl.edu	37	X	72989365	72989365	+	RNA	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRDL1	91851	genome.wustl.edu	37	X	109922563	109922563	+	Splice_Site	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEC1	9947	genome.wustl.edu	37	X	140994741	140994741	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHM2	23207	genome.wustl.edu	37	1	16055611	16055611	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSG1	79363	genome.wustl.edu	37	1	16560219	16560219	+	Nonstop_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXTL1	2134	genome.wustl.edu	37	1	26349521	26349521	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUM1	9698	genome.wustl.edu	37	1	31454254	31454254	+	Splice_Site	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPL	4352	genome.wustl.edu	37	1	43804289	43804289	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAAH	2166	genome.wustl.edu	37	1	46879175	46879175	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL7	79739	genome.wustl.edu	37	1	84356121	84356121	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBP2	2634	genome.wustl.edu	37	1	89578223	89578223	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHIA	27159	genome.wustl.edu	37	1	111854924	111854924	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM46C	54855	genome.wustl.edu	37	1	118166310	118166310	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBPF9	400818	genome.wustl.edu	37	1	144822044	144822044	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288142	100288142	genome.wustl.edu	37	1	148251948	148251948	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLG	2312	genome.wustl.edu	37	1	152287048	152287048	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASH1L	55870	genome.wustl.edu	37	1	155327509	155327509	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FCRL3	115352	genome.wustl.edu	37	1	157665996	157665996	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB37	84614	genome.wustl.edu	37	1	173839547	173839547	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINC1	462	genome.wustl.edu	37	1	173878963	173878963	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RC3H1	149041	genome.wustl.edu	37	1	173930366	173930366	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TROVE2	6738	genome.wustl.edu	37	1	193051375	193051375	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RABIF	5877	genome.wustl.edu	37	1	202850313	202850313	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMOD	2331	genome.wustl.edu	37	1	203316893	203316893	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF1A	9015	genome.wustl.edu	37	1	222757512	222757512	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DISP1	84976	genome.wustl.edu	37	1	223177842	223177842	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF26B	55083	genome.wustl.edu	37	1	245770996	245770996	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC6	79677	genome.wustl.edu	37	2	17898377	17898377	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFT172	26160	genome.wustl.edu	37	2	27669181	27669181	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM179A	165186	genome.wustl.edu	37	2	29222316	29222316	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf71	388939	genome.wustl.edu	37	2	29294889	29294889	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHH2	130271	genome.wustl.edu	37	2	43937648	43937648	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TET3	200424	genome.wustl.edu	37	2	74274489	74274489	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGKV1D-8	28904	genome.wustl.edu	37	2	90260230	90260230	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ST6GAL2	84620	genome.wustl.edu	37	2	107423223	107423223	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K2	10746	genome.wustl.edu	37	2	128066306	128066306	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZRANB3	84083	genome.wustl.edu	37	2	135988147	135988147	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152544187	152544187	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMS1	5937	genome.wustl.edu	37	2	161349852	161349852	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B3GALT1	8708	genome.wustl.edu	37	2	168726345	168726345	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO3B	140469	genome.wustl.edu	37	2	171358358	171358358	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179410152	179410152	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGA4	3676	genome.wustl.edu	37	2	182363436	182363436	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP8	841	genome.wustl.edu	37	2	202149906	202149906	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATIC	471	genome.wustl.edu	37	2	216200802	216200802	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK10	55619	genome.wustl.edu	37	2	225635040	225635040	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A3	1285	genome.wustl.edu	37	2	228173956	228173956	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL6A3	1293	genome.wustl.edu	37	2	238303525	238303525	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRFIP1	9208	genome.wustl.edu	37	2	238672228	238672228	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPR1	3708	genome.wustl.edu	37	3	4808357	4808357	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A6	6533	genome.wustl.edu	37	3	14520022	14520022	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN23	25930	genome.wustl.edu	37	3	47448222	47448222	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCC1	6599	genome.wustl.edu	37	3	47651716	47651716	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR9	54106	genome.wustl.edu	37	3	52256366	52256366	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBE1	2632	genome.wustl.edu	37	3	81754676	81754676	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCET2	257144	genome.wustl.edu	37	3	111842310	111842310	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BOC	91653	genome.wustl.edu	37	3	113004237	113004237	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACPL2	92370	genome.wustl.edu	37	3	141011336	141011336	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCEH1	57552	genome.wustl.edu	37	3	172351527	172351527	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ECE2	9718	genome.wustl.edu	37	3	184009181	184009181	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC4	4585	genome.wustl.edu	37	3	195506089	195506089	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM193A	8603	genome.wustl.edu	37	4	2696715	2696715	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC650293	650293	genome.wustl.edu	37	4	8951847	8951847	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRAS1	80144	genome.wustl.edu	37	4	79238600	79238600	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRAS1	80144	genome.wustl.edu	37	4	79420941	79420941	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL25A1	84570	genome.wustl.edu	37	4	109767322	109767322	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP170P1	645455	genome.wustl.edu	37	4	119475029	119475029	+	RNA	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF17	79960	genome.wustl.edu	37	4	129783097	129783097	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTUD4	54726	genome.wustl.edu	37	4	146059564	146059564	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR2	7097	genome.wustl.edu	37	4	154626316	154626316	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLRG1	5356	genome.wustl.edu	37	4	155462021	155462021	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ3	55714	genome.wustl.edu	37	4	183245382	183245382	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORBS2	8470	genome.wustl.edu	37	4	186545010	186545010	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD9	65980	genome.wustl.edu	37	5	879940	879940	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTGER4	5734	genome.wustl.edu	37	5	40692070	40692070	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UTP15	84135	genome.wustl.edu	37	5	72874921	72874921	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0825	285600	genome.wustl.edu	37	5	93722050	93722050	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FEM1C	56929	genome.wustl.edu	37	5	114860915	114860915	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CATSPER3	347732	genome.wustl.edu	37	5	134343745	134343745	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC23A1	9963	genome.wustl.edu	37	5	138715929	138715929	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000228672	0	genome.wustl.edu	37	5	138728663	138728663	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDST1	3340	genome.wustl.edu	37	5	149919738	149919738	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXC1	2296	genome.wustl.edu	37	6	1611126	1611126	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ECI2	10455	genome.wustl.edu	37	6	4130619	4130619	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIVEP1	3096	genome.wustl.edu	37	6	12123362	12123362	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOX4	6659	genome.wustl.edu	37	6	21595042	21595042	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GMNN	51053	genome.wustl.edu	37	6	24785955	24785955	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCAND3	114821	genome.wustl.edu	37	6	28543817	28543817	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HLA-DRB5	3127	genome.wustl.edu	37	6	32485856	32485856	+	Splice_Site	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL9	23113	genome.wustl.edu	37	6	43153210	43153210	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DST	667	genome.wustl.edu	37	6	56600082	56600082	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FKBP1C	642489	genome.wustl.edu	37	6	63921726	63921726	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTR1E	3354	genome.wustl.edu	37	6	87725675	87725675	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK19	23097	genome.wustl.edu	37	6	110935837	110935837	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LPA	4018	genome.wustl.edu	37	6	160977176	160977176	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K4	4216	genome.wustl.edu	37	6	161470851	161470851	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLLT4	4301	genome.wustl.edu	37	6	168347417	168347417	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HGC6.3	100128124	genome.wustl.edu	37	6	168377029	168377029	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDK1	221935	genome.wustl.edu	37	7	4089055	4089055	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDK1	221935	genome.wustl.edu	37	7	4272966	4272966	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH11	8701	genome.wustl.edu	37	7	21678630	21678630	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251528	0	genome.wustl.edu	37	7	34980269	34980269	+	RNA	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY1	107	genome.wustl.edu	37	7	45632457	45632457	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000240720	0	genome.wustl.edu	37	7	91792840	91792840	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM56	81844	genome.wustl.edu	37	7	100731693	100731693	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPAM1	6677	genome.wustl.edu	37	7	123594428	123594428	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM71F2	346653	genome.wustl.edu	37	7	128320095	128320095	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLNC	2318	genome.wustl.edu	37	7	128484133	128484133	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP6V0A4	50617	genome.wustl.edu	37	7	138417772	138417772	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL1	8454	genome.wustl.edu	37	7	148483687	148483687	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF862	643641	genome.wustl.edu	37	7	149559002	149559002	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMP1	649	genome.wustl.edu	37	8	22037964	22037964	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMAT4	79698	genome.wustl.edu	37	8	40554877	40554877	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131254	100131254	genome.wustl.edu	37	8	54885636	54885636	+	RNA	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRISPLD1	83690	genome.wustl.edu	37	8	75929600	75929600	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF4L2	138009	genome.wustl.edu	37	8	88885797	88885797	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSR2	116039	genome.wustl.edu	37	8	99961313	99961313	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFRSF11B	4982	genome.wustl.edu	37	8	119945263	119945263	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM83A	84985	genome.wustl.edu	37	8	124221769	124221769	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TG	7038	genome.wustl.edu	37	8	134125686	134125686	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC39A4	55630	genome.wustl.edu	37	8	145638016	145638016	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP6	26953	genome.wustl.edu	37	9	6012633	6012633	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFNW1	3467	genome.wustl.edu	37	9	21141496	21141496	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACO1	48	genome.wustl.edu	37	9	32431734	32431734	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPR2	4882	genome.wustl.edu	37	9	35808596	35808596	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TJP2	9414	genome.wustl.edu	37	9	71869243	71869243	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTL7A	10881	genome.wustl.edu	37	9	111625559	111625559	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249728	0	genome.wustl.edu	37	9	133346366	133346366	+	RNA	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSC1	7248	genome.wustl.edu	37	9	135771937	135771937	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TUBBP5	643224	genome.wustl.edu	37	9	141070082	141070082	+	RNA	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC61A2	55176	genome.wustl.edu	37	10	12209885	12209885	+	RNA	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM10	55388	genome.wustl.edu	37	10	13213065	13213065	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000228637	0	genome.wustl.edu	37	10	42394538	42394538	+	RNA	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM21A	387680	genome.wustl.edu	37	10	51829472	51829472	+	Splice_Site	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAH2B	653308	genome.wustl.edu	37	10	52505030	52505030	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH15	65217	genome.wustl.edu	37	10	55587307	55587307	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPIF	10105	genome.wustl.edu	37	10	81109426	81109426	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC31B	25956	genome.wustl.edu	37	10	102256985	102256985	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGFR2	2263	genome.wustl.edu	37	10	123325005	123325005	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMBT1	1755	genome.wustl.edu	37	10	124352100	124352100	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MKI67	4288	genome.wustl.edu	37	10	129902979	129902979	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1274056	1274056	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP98	4928	genome.wustl.edu	37	11	3765739	3765739	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR52B6	340980	genome.wustl.edu	37	11	5602861	5602861	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP47	55031	genome.wustl.edu	37	11	11964496	11964496	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRGPRX4	117196	genome.wustl.edu	37	11	18195145	18195145	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA4	3739	genome.wustl.edu	37	11	30033155	30033155	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MADD	8567	genome.wustl.edu	37	11	47330145	47330145	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VEGFB	7423	genome.wustl.edu	37	11	64003286	64003286	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDCA5	113130	genome.wustl.edu	37	11	64846731	64846731	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM14	10432	genome.wustl.edu	37	11	66393101	66393101	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM4	5936	genome.wustl.edu	37	11	66407320	66407320	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC93B1	81622	genome.wustl.edu	37	11	67764221	67764221	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP20	57569	genome.wustl.edu	37	11	110450579	110450579	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIK2	23235	genome.wustl.edu	37	11	111590662	111590662	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORL1	6653	genome.wustl.edu	37	11	121490626	121490626	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDON	50937	genome.wustl.edu	37	11	125873951	125873951	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWF	7450	genome.wustl.edu	37	12	6125770	6125770	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLCO1A2	6579	genome.wustl.edu	37	12	21428270	21428270	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASC1	55259	genome.wustl.edu	37	12	25311420	25311420	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNM1L	10059	genome.wustl.edu	37	12	32873712	32873712	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPNE8	144402	genome.wustl.edu	37	12	39299265	39299265	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CERS5	91012	genome.wustl.edu	37	12	50529536	50529536	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2AP1	121129	genome.wustl.edu	37	12	55968615	55968615	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRIQ1	84125	genome.wustl.edu	37	12	85547523	85547523	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNC1	10154	genome.wustl.edu	37	12	94654530	94654530	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX54	79039	genome.wustl.edu	37	12	113612890	113612890	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAB1	5564	genome.wustl.edu	37	12	120117782	120117782	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARP4	143	genome.wustl.edu	37	13	25068713	25068713	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBEA	26960	genome.wustl.edu	37	13	35734112	35734112	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FREM2	341640	genome.wustl.edu	37	13	39263338	39263338	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC341689	341689	genome.wustl.edu	37	13	59103567	59103567	+	RNA	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOX4	9878	genome.wustl.edu	37	14	21961130	21961130	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP46A1	10858	genome.wustl.edu	37	14	100173094	100173094	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1H1	1778	genome.wustl.edu	37	14	102499764	102499764	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R13B	23368	genome.wustl.edu	37	14	104205139	104205139	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHV3-7	28452	genome.wustl.edu	37	14	106518460	106518460	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288995	100288995	genome.wustl.edu	37	15	41228676	41228676	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAPKBP1	23005	genome.wustl.edu	37	15	42110725	42110725	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMD5	84978	genome.wustl.edu	37	15	44177949	44177949	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC1	8925	genome.wustl.edu	37	15	64039185	64039185	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASKIN1	57524	genome.wustl.edu	37	16	2235129	2235129	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLX4	84464	genome.wustl.edu	37	16	3640795	3640795	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CORO7	79585	genome.wustl.edu	37	16	4410510	4410510	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000234719	0	genome.wustl.edu	37	16	12021521	12021521	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GP2	2813	genome.wustl.edu	37	16	20329561	20329561	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRN3P2	653390	genome.wustl.edu	37	16	29110458	29110458	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMC5	79798	genome.wustl.edu	37	16	31473906	31473906	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287647	100287647	genome.wustl.edu	37	16	33941831	33941831	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OGFOD1	55239	genome.wustl.edu	37	16	56485605	56485605	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOB1	28987	genome.wustl.edu	37	16	69783241	69783241	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72829284	72829284	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000226351	0	genome.wustl.edu	37	16	73127092	73127092	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM170A	124491	genome.wustl.edu	37	16	75481528	75481528	+	Silent	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM157C	100132055	genome.wustl.edu	37	16	90172952	90172952	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MNT	4335	genome.wustl.edu	37	17	2290553	2290553	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MINK1	50488	genome.wustl.edu	37	17	4797386	4797386	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEURL4	84461	genome.wustl.edu	37	17	7227553	7227553	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALOXE3	59344	genome.wustl.edu	37	17	8013593	8013593	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0100	9703	genome.wustl.edu	37	17	26966356	26966356	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYZL6	57151	genome.wustl.edu	37	17	34263832	34263832	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMD3	5709	genome.wustl.edu	37	17	38153760	38153760	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN4A	6329	genome.wustl.edu	37	17	62041914	62041914	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPS7	51081	genome.wustl.edu	37	17	73258940	73258940	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBF1	85302	genome.wustl.edu	37	17	73915875	73915875	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGAT5B	146664	genome.wustl.edu	37	17	74869037	74869037	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP36	57602	genome.wustl.edu	37	17	76823323	76823323	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC40	55036	genome.wustl.edu	37	17	78023994	78023994	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD7	924	genome.wustl.edu	37	17	80273286	80273286	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFG3L2	10939	genome.wustl.edu	37	18	12329639	12329639	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF125	54941	genome.wustl.edu	37	18	29617224	29617224	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIAS2	9063	genome.wustl.edu	37	18	44470944	44470944	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A41	284427	genome.wustl.edu	37	19	6427453	6427453	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNPLA6	10908	genome.wustl.edu	37	19	7623747	7623747	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000188314	0	genome.wustl.edu	37	19	9346320	9346320	+	Silent	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG4D	84971	genome.wustl.edu	37	19	10662719	10662719	+	Splice_Site	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KANK2	25959	genome.wustl.edu	37	19	11287389	11287389	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGL3	57139	genome.wustl.edu	37	19	11505146	11505146	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ELAVL3	1995	genome.wustl.edu	37	19	11568981	11568981	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF69	7620	genome.wustl.edu	37	19	12016514	12016514	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASNA1	439	genome.wustl.edu	37	19	12848478	12848478	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1A	773	genome.wustl.edu	37	19	13482585	13482585	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC13A	23025	genome.wustl.edu	37	19	17766129	17766129	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAPLN4	404037	genome.wustl.edu	37	19	19371814	19371814	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF14	7561	genome.wustl.edu	37	19	19825220	19825220	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF429	353088	genome.wustl.edu	37	19	21720863	21720863	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287226	100287226	genome.wustl.edu	37	19	22497474	22497474	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF792	126375	genome.wustl.edu	37	19	35449452	35449452	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APLP1	333	genome.wustl.edu	37	19	36362251	36362251	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX7A1	1346	genome.wustl.edu	37	19	36642594	36642594	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF461	92283	genome.wustl.edu	37	19	37130173	37130173	+	Silent	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF155	7711	genome.wustl.edu	37	19	44500667	44500667	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF229	7772	genome.wustl.edu	37	19	44932566	44932566	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOSIP	51070	genome.wustl.edu	37	19	50059577	50059577	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH14	79784	genome.wustl.edu	37	19	50775825	50775825	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC388559	388559	genome.wustl.edu	37	19	53411187	53411187	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LILRP2	79166	genome.wustl.edu	37	19	55224461	55224461	+	RNA	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF550	162972	genome.wustl.edu	37	19	58058953	58058953	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100130710	100130710	genome.wustl.edu	37	19	58153051	58153051	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF552	79818	genome.wustl.edu	37	19	58320161	58320161	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BPI	671	genome.wustl.edu	37	20	36948529	36948529	+	Splice_Site	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRT	11122	genome.wustl.edu	37	20	41420020	41420020	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF334	55713	genome.wustl.edu	37	20	45130930	45130930	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHACTR3	116154	genome.wustl.edu	37	20	58349367	58349367	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHACTR3	116154	genome.wustl.edu	37	20	58349442	58349442	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNQ2	3785	genome.wustl.edu	37	20	62071056	62071056	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM11	54033	genome.wustl.edu	37	21	15588530	15588530	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP25-1	100131902	genome.wustl.edu	37	21	31661714	31661714	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C21orf59	56683	genome.wustl.edu	37	21	33974538	33974538	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCR	613	genome.wustl.edu	37	22	23651650	23651650	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP5L	91355	genome.wustl.edu	37	22	25750681	25750681	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SF3A1	10291	genome.wustl.edu	37	22	30733844	30733844	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBFOX2	23543	genome.wustl.edu	37	22	36142013	36142013	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EP300	2033	genome.wustl.edu	37	22	41542813	41542813	+	Silent	SNP	A	A	G			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBED4	9889	genome.wustl.edu	37	22	50280695	50280695	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MID1	4281	genome.wustl.edu	37	X	10535360	10535360	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB9	140462	genome.wustl.edu	37	X	15270503	15270503	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS6KA3	6197	genome.wustl.edu	37	X	20185716	20185716	+	Silent	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF645	158506	genome.wustl.edu	37	X	22291388	22291388	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39932429	39932429	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP9X	8239	genome.wustl.edu	37	X	41057933	41057933	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUV39H1	6839	genome.wustl.edu	37	X	48559022	48559022	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCN5	1184	genome.wustl.edu	37	X	49840586	49840586	+	Silent	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALG13	79868	genome.wustl.edu	37	X	110968236	110968236	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF6	9459	genome.wustl.edu	37	X	135861592	135861592	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP6AP1	537	genome.wustl.edu	37	X	153663830	153663830	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
G6PD	2539	genome.wustl.edu	37	X	153760967	153760967	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOXD3	3232	genome.wustl.edu	37	2	177036865	177036866	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNRC1	10957	genome.wustl.edu	37	6	89793677	89793677	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRN3	54674	genome.wustl.edu	37	7	110764636	110764637	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A16F-01	TCGA-D1-A16F-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287554	100287554	genome.wustl.edu	37	10	51623648	51623648	+	RNA	DEL	G	G	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDGA2	161357	genome.wustl.edu	37	14	47566079	47566080	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A16F-01	TCGA-D1-A16F-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000214759	0	genome.wustl.edu	37	14	65735812	65735812	+	Splice_Site	DEL	T	T	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XYLT2	64132	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF43	54894	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC165	23255	genome.wustl.edu	37	18	8784105	8784105	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLI	11201	genome.wustl.edu	37	18	51795958	51795960	+	In_Frame_Del	DEL	CGA	CGA	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	CGA	CGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD93	22918	genome.wustl.edu	37	20	23066469	23066469	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000231857	0	genome.wustl.edu	37	X	64548402	64548402	+	Splice_Site	DEL	T	T	-			TCGA-D1-A16F-01	TCGA-D1-A16F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
