Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
UBR4	23352	genome.wustl.edu	37	1	19415445	19415445	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBXN11	91544	genome.wustl.edu	37	1	26608853	26608853	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43902924	43902924	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADORA3	140	genome.wustl.edu	37	1	112045872	112045872	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMO5	2330	genome.wustl.edu	37	1	146658804	146658804	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6N2	81442	genome.wustl.edu	37	1	158746588	158746588	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XPR1	9213	genome.wustl.edu	37	1	180849412	180849412	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF14	9928	genome.wustl.edu	37	1	200587334	200587334	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT2	127833	genome.wustl.edu	37	1	202574721	202574721	+	Splice_Site	SNP	A	A	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH2A	7399	genome.wustl.edu	37	1	215853681	215853681	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENAH	55740	genome.wustl.edu	37	1	225707077	225707077	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1383	54627	genome.wustl.edu	37	1	232941441	232941441	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF496	84838	genome.wustl.edu	37	1	247463987	247463987	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2M7	391196	genome.wustl.edu	37	1	248487037	248487037	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HPCAL1	3241	genome.wustl.edu	37	2	10559978	10559978	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY3	109	genome.wustl.edu	37	2	25062800	25062800	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOCS5	9655	genome.wustl.edu	37	2	46986362	46986362	+	Silent	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBTFL6	643615	genome.wustl.edu	37	2	98253113	98253113	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1QL2	165257	genome.wustl.edu	37	2	119915425	119915425	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD5	55777	genome.wustl.edu	37	2	149227494	149227494	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPS1	1373	genome.wustl.edu	37	2	211540487	211540487	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PER2	8864	genome.wustl.edu	37	2	239159207	239159207	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPK1B	7348	genome.wustl.edu	37	3	118906821	118906821	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL6A5	256076	genome.wustl.edu	37	3	130187863	130187863	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLSCR2	57047	genome.wustl.edu	37	3	146177698	146177698	+	Silent	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MME	4311	genome.wustl.edu	37	3	154884781	154884781	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178927980	178927980	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPAL1	152519	genome.wustl.edu	37	4	48032178	48032178	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
YTHDC1	91746	genome.wustl.edu	37	4	69184261	69184261	+	Silent	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCG2	9429	genome.wustl.edu	37	4	89052285	89052285	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD50	57182	genome.wustl.edu	37	4	125592000	125592000	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TIGD4	201798	genome.wustl.edu	37	4	153691274	153691274	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FHDC1	85462	genome.wustl.edu	37	4	153897117	153897117	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM46	166863	genome.wustl.edu	37	4	155720031	155720031	+	Nonsense_Mutation	SNP	T	T	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDKN2AIP	55602	genome.wustl.edu	37	4	184367453	184367453	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DROSHA	29102	genome.wustl.edu	37	5	31486602	31486602	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CWC27	10283	genome.wustl.edu	37	5	64314116	64314116	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA2	56146	genome.wustl.edu	37	5	140176463	140176463	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2B3	442184	genome.wustl.edu	37	6	29054301	29054301	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM4	2914	genome.wustl.edu	37	6	34101142	34101142	+	Silent	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IMPG1	3617	genome.wustl.edu	37	6	76715183	76715183	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF292	23036	genome.wustl.edu	37	6	87966983	87966983	+	Silent	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MANEA	79694	genome.wustl.edu	37	6	96034487	96034487	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE1C	5137	genome.wustl.edu	37	7	31920390	31920390	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI3	2737	genome.wustl.edu	37	7	42005919	42005919	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A40	55972	genome.wustl.edu	37	7	87465641	87465641	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3HAV1	56829	genome.wustl.edu	37	7	138794068	138794068	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGF17	8822	genome.wustl.edu	37	8	21904064	21904064	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEFM	4741	genome.wustl.edu	37	8	24772127	24772127	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHCHD7	79145	genome.wustl.edu	37	8	57127228	57127228	+	Splice_Site	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR124-2	406908	genome.wustl.edu	37	8	65291812	65291812	+	RNA	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS13B	157680	genome.wustl.edu	37	8	100865681	100865681	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	113662441	113662441	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM135B	51059	genome.wustl.edu	37	8	139163582	139163582	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGM5	5239	genome.wustl.edu	37	9	71114229	71114229	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCNT1	2650	genome.wustl.edu	37	9	79117365	79117365	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYK	6850	genome.wustl.edu	37	9	93650849	93650849	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPB41L4B	54566	genome.wustl.edu	37	9	111976038	111976038	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHMT1	79813	genome.wustl.edu	37	9	140637853	140637853	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY4	57705	genome.wustl.edu	37	10	49939514	49939514	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692935	89692935	+	Nonsense_Mutation	SNP	T	T	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf26	54838	genome.wustl.edu	37	10	104572427	104572427	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM20	282996	genome.wustl.edu	37	10	112581679	112581679	+	Splice_Site	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATRNL1	26033	genome.wustl.edu	37	10	117093845	117093845	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51T1	401665	genome.wustl.edu	37	11	4903148	4903148	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3F	8665	genome.wustl.edu	37	11	8014442	8014442	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCSL	390110	genome.wustl.edu	37	11	44073241	44073241	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALKBH8	91801	genome.wustl.edu	37	11	107431621	107431621	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPAT	4863	genome.wustl.edu	37	11	108061222	108061222	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OVOS	408186	genome.wustl.edu	37	12	9705185	9705185	+	Splice_Site	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPRC5A	9052	genome.wustl.edu	37	12	13061271	13061271	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL2A1	1280	genome.wustl.edu	37	12	48374742	48374742	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCN2	41	genome.wustl.edu	37	12	50474357	50474357	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT73	319101	genome.wustl.edu	37	12	53011883	53011883	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOAT2	8435	genome.wustl.edu	37	12	53499744	53499744	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACACB	32	genome.wustl.edu	37	12	109689902	109689902	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OAS2	4939	genome.wustl.edu	37	12	113442836	113442836	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLE	5426	genome.wustl.edu	37	12	133249804	133249804	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000187721	0	genome.wustl.edu	37	13	19601018	19601018	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	48947629	48947629	+	Splice_Site	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D4	9882	genome.wustl.edu	37	13	75936666	75936666	+	Silent	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2	8924	genome.wustl.edu	37	15	28408246	28408246	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JMJD7-PLA2G4B	8681	genome.wustl.edu	37	15	42131176	42131176	+	RNA	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GABPB1	2553	genome.wustl.edu	37	15	50578281	50578281	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF768	79724	genome.wustl.edu	37	16	30535975	30535975	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CMTM2	146225	genome.wustl.edu	37	16	66613719	66613719	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP5K	51763	genome.wustl.edu	37	17	1413080	1413080	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPATA22	84690	genome.wustl.edu	37	17	3372583	3372583	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPV3	162514	genome.wustl.edu	37	17	3436060	3436060	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7577565	7577565	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH2	4620	genome.wustl.edu	37	17	10447073	10447073	+	Silent	SNP	G	G	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DRG2	1819	genome.wustl.edu	37	17	18003953	18003953	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLJ36000	284124	genome.wustl.edu	37	17	21904069	21904069	+	RNA	SNP	C	C	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KSR1	8844	genome.wustl.edu	37	17	25928932	25928932	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGCA	6442	genome.wustl.edu	37	17	48247549	48247549	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNAL	2774	genome.wustl.edu	37	18	11867209	11867209	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC14A2	8170	genome.wustl.edu	37	18	43247878	43247878	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF532	55205	genome.wustl.edu	37	18	56621000	56621000	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000207072	0	genome.wustl.edu	37	18	66526207	66526207	+	RNA	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID3A	1820	genome.wustl.edu	37	19	965062	965062	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF525	170958	genome.wustl.edu	37	19	53886837	53886837	+	RNA	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCB4	5332	genome.wustl.edu	37	20	9453459	9453459	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NINL	22981	genome.wustl.edu	37	20	25459720	25459720	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPRD1B	58490	genome.wustl.edu	37	20	36686026	36686026	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM11	54033	genome.wustl.edu	37	21	15599471	15599471	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GART	2618	genome.wustl.edu	37	21	34889432	34889432	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRK	203447	genome.wustl.edu	37	X	105167391	105167391	+	Silent	SNP	T	T	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNL2	29889	genome.wustl.edu	37	1	38041275	38041275	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE4DIP	9659	genome.wustl.edu	37	1	144857694	144857694	+	Silent	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOTCH2NL	388677	genome.wustl.edu	37	1	145281658	145281658	+	Silent	SNP	C	C	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289350	100289350	genome.wustl.edu	37	2	91924983	91924983	+	RNA	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD9	65980	genome.wustl.edu	37	5	879974	879974	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNL1	2794	genome.wustl.edu	37	6	30515142	30515142	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS52	6293	genome.wustl.edu	37	6	33219411	33219411	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFRSF21	27242	genome.wustl.edu	37	6	47252121	47252121	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100290062	100290062	genome.wustl.edu	37	7	4899292	4899292	+	Silent	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD1	64478	genome.wustl.edu	37	8	3072068	3072068	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INSL4	3641	genome.wustl.edu	37	9	5233789	5233789	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP1	392	genome.wustl.edu	37	11	46700689	46700689	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY6	112	genome.wustl.edu	37	12	49162494	49162494	+	Silent	SNP	G	G	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH9	5101	genome.wustl.edu	37	13	67205537	67205537	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM16	10626	genome.wustl.edu	37	17	15535954	15535954	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF112	7732	genome.wustl.edu	37	17	19316905	19316905	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRIP1	83990	genome.wustl.edu	37	17	59820418	59820418	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPTOR	57521	genome.wustl.edu	37	17	78727893	78727893	+	Silent	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAMD4B	55095	genome.wustl.edu	37	19	39847697	39847697	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTGIR	5739	genome.wustl.edu	37	19	47127140	47127140	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198804	0	genome.wustl.edu	37	MT	7385	7385	+	Silent	SNP	A	A	G			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000207472	0	genome.wustl.edu	37	1	182951421	182951422	+	RNA	INS	-	-	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APC	324	genome.wustl.edu	37	5	112164664	112164664	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR13C9	286362	genome.wustl.edu	37	9	107380446	107380447	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247855	0	genome.wustl.edu	37	12	53910770	53910770	+	RNA	DEL	A	A	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WASF3	10810	genome.wustl.edu	37	13	27255387	27255387	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
YY1	7528	genome.wustl.edu	37	14	100705788	100705790	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	CCA	CCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644390	644390	genome.wustl.edu	37	15	34781074	34781080	+	RNA	DEL	AAAAAAA	AAAAAAA	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	AAAAAAA	AAAAAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP2K4	6416	genome.wustl.edu	37	17	12011162	12011184	+	Frame_Shift_Del	DEL	AATATGTATATAGTGTATTAGAT	AATATGTATATAGTGTATTAGAT	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	AATATGTATATAGTGTATTAGAT	AATATGTATATAGTGTATTAGAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX1	3975	genome.wustl.edu	37	17	35300395	35300395	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A16N-01	TCGA-D1-A16N-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEB3	4114	genome.wustl.edu	37	X	30254194	30254195	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A16N-01	TCGA-D1-A16N-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
