Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
MYOM3	127294	genome.wustl.edu	37	1	24432425	24432425	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMRTA2	63950	genome.wustl.edu	37	1	50885379	50885379	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F5	2153	genome.wustl.edu	37	1	169524517	169524517	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QPCT	25797	genome.wustl.edu	37	2	37580047	37580047	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC401010	401010	genome.wustl.edu	37	2	132201021	132201021	+	RNA	SNP	C	C	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERMN	57471	genome.wustl.edu	37	2	158178248	158178248	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGAP1	116987	genome.wustl.edu	37	2	237028848	237028848	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRFIP1	9208	genome.wustl.edu	37	2	238626419	238626419	+	Silent	SNP	G	G	C			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF717	100131827	genome.wustl.edu	37	3	75786971	75786971	+	Silent	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ILDR1	286676	genome.wustl.edu	37	3	121720691	121720691	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR171	29909	genome.wustl.edu	37	3	150917053	150917053	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936083	178936083	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4orf27	54969	genome.wustl.edu	37	4	170669973	170669973	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG4B	153478	genome.wustl.edu	37	5	174102	174102	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIOK2	55781	genome.wustl.edu	37	5	96500768	96500768	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB3	56132	genome.wustl.edu	37	5	140482454	140482454	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTNL3	10917	genome.wustl.edu	37	5	180432415	180432415	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP9	10048	genome.wustl.edu	37	6	13622615	13622615	+	Silent	SNP	T	T	C			TCGA-D1-A16S-01	TCGA-D1-A16S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX19	90639	genome.wustl.edu	37	7	975071	975071	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM66	51669	genome.wustl.edu	37	8	29931531	29931531	+	Silent	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOV	4856	genome.wustl.edu	37	8	120435253	120435253	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC24A2	25769	genome.wustl.edu	37	9	19521031	19521031	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UCN3	114131	genome.wustl.edu	37	10	5415797	5415797	+	Silent	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCAR1	55749	genome.wustl.edu	37	10	70507314	70507314	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZRANB1	54764	genome.wustl.edu	37	10	126672204	126672204	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR123	84435	genome.wustl.edu	37	10	134912161	134912161	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1QTNF5	114902	genome.wustl.edu	37	11	119210202	119210202	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN8A	6334	genome.wustl.edu	37	12	52200920	52200920	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COQ10A	93058	genome.wustl.edu	37	12	56662856	56662856	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFC3H1	196441	genome.wustl.edu	37	12	72009091	72009091	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRD7	29117	genome.wustl.edu	37	16	50383999	50383999	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A16S-01	TCGA-D1-A16S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7577551	7577551	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC47A1	55244	genome.wustl.edu	37	17	19445707	19445707	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP4-7	100132476	genome.wustl.edu	37	17	39240791	39240791	+	Silent	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRI1	84245	genome.wustl.edu	37	19	13879242	13879242	+	Silent	SNP	C	C	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC6	946	genome.wustl.edu	37	19	52033179	52033179	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R1A	5518	genome.wustl.edu	37	19	52716323	52716323	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSNK2A1	1457	genome.wustl.edu	37	20	480518	480518	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFT52	51098	genome.wustl.edu	37	20	42232867	42232867	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIMK2	3985	genome.wustl.edu	37	22	31662113	31662113	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCNB3	85417	genome.wustl.edu	37	X	50053708	50053708	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43868851	43868851	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VNN1	8876	genome.wustl.edu	37	6	133013590	133013590	+	Silent	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWDE	221806	genome.wustl.edu	37	7	12412797	12412797	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMA3C	10512	genome.wustl.edu	37	7	80374328	80374328	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251262	0	genome.wustl.edu	37	8	144790300	144790300	+	RNA	SNP	A	A	G			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBP5	83758	genome.wustl.edu	37	12	7281367	7281367	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF5A	3798	genome.wustl.edu	37	12	57963867	57963867	+	Silent	SNP	C	C	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRFN5	145581	genome.wustl.edu	37	14	42357117	42357117	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMP11	4320	genome.wustl.edu	37	22	24121497	24121497	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	12818	12818	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAUS7	55559	genome.wustl.edu	37	X	152722109	152722109	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ3	55714	genome.wustl.edu	37	4	183714097	183714097	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A16S-01	TCGA-D1-A16S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC340900	340900	genome.wustl.edu	37	10	22498484	22498485	+	In_Frame_Ins	INS	-	-	AGA			TCGA-D1-A16S-01	TCGA-D1-A16S-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV2	89797	genome.wustl.edu	37	11	20072852	20072852	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A16S-01	TCGA-D1-A16S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389842	389842	genome.wustl.edu	37	X	25663896	25663897	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A16S-01	TCGA-D1-A16S-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
