Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CLSTN1	22883	genome.wustl.edu	37	1	9791873	9791873	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27100153	27100153	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFYVE9	9372	genome.wustl.edu	37	1	52704334	52704334	+	Silent	SNP	A	A	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCND3	3752	genome.wustl.edu	37	1	112524890	112524890	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRC2C	23215	genome.wustl.edu	37	1	171526834	171526834	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIA3	375056	genome.wustl.edu	37	1	222806556	222806556	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNT9A	7483	genome.wustl.edu	37	1	228113098	228113098	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKP4	8502	genome.wustl.edu	37	2	159481458	159481458	+	Nonsense_Mutation	SNP	T	T	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLB1L	79411	genome.wustl.edu	37	2	220108240	220108240	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266101	41266101	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POU4F2	5458	genome.wustl.edu	37	4	147561807	147561807	+	Silent	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASGRF2	5924	genome.wustl.edu	37	5	80369248	80369248	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAD50	10111	genome.wustl.edu	37	5	131915092	131915092	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17C-01	TCGA-D1-A17C-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A13	157724	genome.wustl.edu	37	8	87242198	87242198	+	Silent	SNP	C	C	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP3	79937	genome.wustl.edu	37	9	39176054	39176054	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1217	56243	genome.wustl.edu	37	10	24762255	24762255	+	Silent	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTPAP	55149	genome.wustl.edu	37	10	30602552	30602552	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDHR5	53841	genome.wustl.edu	37	11	621818	621818	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNK4	50801	genome.wustl.edu	37	11	64060456	64060456	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSGA10IP	254187	genome.wustl.edu	37	11	65715474	65715474	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6T1	219874	genome.wustl.edu	37	11	123814065	123814065	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD52	283373	genome.wustl.edu	37	12	56641844	56641844	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV3	89795	genome.wustl.edu	37	12	78583935	78583935	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17C-01	TCGA-D1-A17C-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAS2L3	283431	genome.wustl.edu	37	12	101017658	101017658	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2A2	488	genome.wustl.edu	37	12	110783912	110783912	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ING1	3621	genome.wustl.edu	37	13	111372118	111372118	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF31	55072	genome.wustl.edu	37	14	24624842	24624842	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHV1-58	28464	genome.wustl.edu	37	14	107078394	107078394	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGA	23269	genome.wustl.edu	37	15	42052627	42052627	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC2A4	6517	genome.wustl.edu	37	17	7188193	7188193	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD3	1107	genome.wustl.edu	37	17	7801815	7801815	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGB3	3690	genome.wustl.edu	37	17	45361921	45361921	+	Silent	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D16	125058	genome.wustl.edu	37	17	77983988	77983988	+	Silent	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2A6	1548	genome.wustl.edu	37	19	41355875	41355875	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO18B	84700	genome.wustl.edu	37	22	26317299	26317299	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR1	9620	genome.wustl.edu	37	22	46760035	46760035	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39921444	39921444	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17C-01	TCGA-D1-A17C-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAOA	4128	genome.wustl.edu	37	X	43515638	43515638	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEA11	4110	genome.wustl.edu	37	X	148797770	148797770	+	Silent	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRPK3	26576	genome.wustl.edu	37	X	153046985	153046985	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CROCCP3	114819	genome.wustl.edu	37	1	16811337	16811337	+	RNA	SNP	C	C	G			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC6B	23233	genome.wustl.edu	37	2	72740322	72740322	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35F5	80255	genome.wustl.edu	37	2	114500333	114500333	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17C-01	TCGA-D1-A17C-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NMUR1	10316	genome.wustl.edu	37	2	232392954	232392954	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF26	26084	genome.wustl.edu	37	3	153973234	153973234	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC30A9	10463	genome.wustl.edu	37	4	42062225	42062225	+	Silent	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM33	155435	genome.wustl.edu	37	7	155537901	155537901	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLGAP2	9228	genome.wustl.edu	37	8	1575045	1575045	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOP1MT	116447	genome.wustl.edu	37	8	144392337	144392337	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4D10	390197	genome.wustl.edu	37	11	59245374	59245374	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NYNRIN	57523	genome.wustl.edu	37	14	24879282	24879282	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBBP6	5930	genome.wustl.edu	37	16	24580488	24580488	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM4B	23030	genome.wustl.edu	37	19	5144107	5144107	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH14	79784	genome.wustl.edu	37	19	50762440	50762440	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17C-01	TCGA-D1-A17C-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFI1	9814	genome.wustl.edu	37	22	31952985	31952985	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRPK3	26576	genome.wustl.edu	37	X	153046585	153046585	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17C-01	TCGA-D1-A17C-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
