Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
SLC25A33	84275	genome.wustl.edu	37	1	9640106	9640106	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANGPTL7	10218	genome.wustl.edu	37	1	11249707	11249707	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCHD2	57540	genome.wustl.edu	37	1	11579857	11579857	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCHD2	57540	genome.wustl.edu	37	1	11595586	11595586	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUL1	79594	genome.wustl.edu	37	1	20827664	20827664	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAP3	55616	genome.wustl.edu	37	1	23769086	23769086	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1522	57648	genome.wustl.edu	37	1	33235619	33235619	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP7D1	55700	genome.wustl.edu	37	1	36636621	36636621	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNIP1	79753	genome.wustl.edu	37	1	38005964	38005964	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIVEP3	59269	genome.wustl.edu	37	1	42048157	42048157	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED8	112950	genome.wustl.edu	37	1	43853172	43853172	+	Splice_Site	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO13	9670	genome.wustl.edu	37	1	44433133	44433133	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK1	3716	genome.wustl.edu	37	1	65305333	65305333	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZRANB2	9406	genome.wustl.edu	37	1	71542541	71542541	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR2	1952	genome.wustl.edu	37	1	109793252	109793252	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGI3	260425	genome.wustl.edu	37	1	114201819	114201819	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSDE1	7812	genome.wustl.edu	37	1	115260812	115260812	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIAS3	10401	genome.wustl.edu	37	1	145584028	145584028	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GJA5	2702	genome.wustl.edu	37	1	147230417	147230417	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBPF15	284565	genome.wustl.edu	37	1	148594568	148594568	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB13	5872	genome.wustl.edu	37	1	153958628	153958628	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9	57549	genome.wustl.edu	37	1	159901336	159901336	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CFH	3075	genome.wustl.edu	37	1	196706714	196706714	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASPM	259266	genome.wustl.edu	37	1	197057452	197057452	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2B4	493	genome.wustl.edu	37	1	203670029	203670029	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUSP10	11221	genome.wustl.edu	37	1	221879739	221879739	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRSS38	339501	genome.wustl.edu	37	1	228003870	228003870	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1804	84451	genome.wustl.edu	37	1	233515137	233515137	+	Silent	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEATR1	55127	genome.wustl.edu	37	1	236746393	236746393	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMN2	56776	genome.wustl.edu	37	1	240256817	240256817	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADD2	119	genome.wustl.edu	37	2	70918057	70918057	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPHOSPH10	10199	genome.wustl.edu	37	2	71360483	71360483	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH6	1768	genome.wustl.edu	37	2	85012776	85012776	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WASH2P	375260	genome.wustl.edu	37	2	114356271	114356271	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STEAP3	55240	genome.wustl.edu	37	2	120003399	120003399	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAP130	79595	genome.wustl.edu	37	2	128712714	128712714	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ORC4	5000	genome.wustl.edu	37	2	148696725	148696725	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAM2	10254	genome.wustl.edu	37	2	153003756	153003756	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFE2L2	4780	genome.wustl.edu	37	2	178098806	178098806	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179431261	179431261	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1486	57624	genome.wustl.edu	37	2	226378217	226378217	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALPPL2	251	genome.wustl.edu	37	2	233272616	233272616	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA4	2803	genome.wustl.edu	37	3	37323450	37323450	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLEC1	9940	genome.wustl.edu	37	3	38151053	38151053	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LARS2	23395	genome.wustl.edu	37	3	45557631	45557631	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL7A1	1294	genome.wustl.edu	37	3	48623615	48623615	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCBLD2	131566	genome.wustl.edu	37	3	98530395	98530395	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D23	55773	genome.wustl.edu	37	3	100021057	100021057	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BBX	56987	genome.wustl.edu	37	3	107520039	107520039	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBL1XR1	79718	genome.wustl.edu	37	3	176768330	176768330	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC39	339829	genome.wustl.edu	37	3	180379669	180379669	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ECE2	9718	genome.wustl.edu	37	3	183975406	183975406	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDHAP2	727956	genome.wustl.edu	37	3	195400751	195400751	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORCS2	57537	genome.wustl.edu	37	4	7705052	7705052	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC650293	650293	genome.wustl.edu	37	4	8951792	8951792	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMPRSS11F	389208	genome.wustl.edu	37	4	68938082	68938082	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUFY3	22902	genome.wustl.edu	37	4	71628262	71628262	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC152845	152845	genome.wustl.edu	37	4	85166291	85166291	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS12	57117	genome.wustl.edu	37	4	106604429	106604429	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDST4	64579	genome.wustl.edu	37	4	115767075	115767075	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPC3	7222	genome.wustl.edu	37	4	122853582	122853582	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT4	79633	genome.wustl.edu	37	4	126400925	126400925	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PABPC4L	132430	genome.wustl.edu	37	4	135121448	135121448	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0922	23240	genome.wustl.edu	37	4	154523475	154523475	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWC2	80014	genome.wustl.edu	37	4	184129246	184129246	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORBS2	8470	genome.wustl.edu	37	4	186559306	186559306	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FASTKD3	79072	genome.wustl.edu	37	5	7867081	7867081	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249556	0	genome.wustl.edu	37	5	14652550	14652550	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH18	1016	genome.wustl.edu	37	5	19571762	19571762	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TARS	6897	genome.wustl.edu	37	5	33453456	33453456	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPBL	25836	genome.wustl.edu	37	5	37052503	37052503	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CENPK	64105	genome.wustl.edu	37	5	64814373	64814373	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67589310	67589310	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SV2C	22987	genome.wustl.edu	37	5	75594749	75594749	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AP3B1	8546	genome.wustl.edu	37	5	77409577	77409577	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFYVE16	9765	genome.wustl.edu	37	5	79751541	79751541	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARRDC3	57561	genome.wustl.edu	37	5	90670759	90670759	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC37	9652	genome.wustl.edu	37	5	94842693	94842693	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA4	56144	genome.wustl.edu	37	5	140188623	140188623	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB6	56130	genome.wustl.edu	37	5	140531969	140531969	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251462	0	genome.wustl.edu	37	5	140621697	140621697	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA1	56114	genome.wustl.edu	37	5	140710396	140710396	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000241956	0	genome.wustl.edu	37	5	164028109	164028109	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM41	90933	genome.wustl.edu	37	5	180660759	180660759	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0319	9856	genome.wustl.edu	37	6	24563703	24563703	+	Silent	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HLA-DOB	3112	genome.wustl.edu	37	6	32782828	32782828	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGD2	221472	genome.wustl.edu	37	6	36982459	36982459	+	Silent	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCTE1	202500	genome.wustl.edu	37	6	44253985	44253985	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPBG	7162	genome.wustl.edu	37	6	83075636	83075636	+	Silent	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC16A10	117247	genome.wustl.edu	37	6	111498811	111498811	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM26E	254228	genome.wustl.edu	37	6	116836819	116836819	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSPH4A	345895	genome.wustl.edu	37	6	116938331	116938331	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf170	221322	genome.wustl.edu	37	6	121642830	121642830	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VNN2	8875	genome.wustl.edu	37	6	133078922	133078922	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAB2	23118	genome.wustl.edu	37	6	149718860	149718860	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TIAM2	26230	genome.wustl.edu	37	6	155577787	155577787	+	Silent	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR27	253769	genome.wustl.edu	37	6	169982939	169982939	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH11	8701	genome.wustl.edu	37	7	21892155	21892155	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GGCT	79017	genome.wustl.edu	37	7	30540210	30540210	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPDR1	54749	genome.wustl.edu	37	7	37988590	37988590	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPC1L1	29881	genome.wustl.edu	37	7	44578992	44578992	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO1G	64005	genome.wustl.edu	37	7	45005293	45005293	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C7orf57	136288	genome.wustl.edu	37	7	48080988	48080988	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF498	221785	genome.wustl.edu	37	7	99227118	99227118	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100128729	100128729	genome.wustl.edu	37	7	128214778	128214778	+	RNA	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DENND2A	27147	genome.wustl.edu	37	7	140221708	140221708	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP2	835	genome.wustl.edu	37	7	143000990	143000990	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2A5	393046	genome.wustl.edu	37	7	143748064	143748064	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSPO	23145	genome.wustl.edu	37	7	149520473	149520473	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNH2	3757	genome.wustl.edu	37	7	150649877	150649877	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB10	136371	genome.wustl.edu	37	7	150878314	150878314	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYOM2	9172	genome.wustl.edu	37	8	2005570	2005570	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LZTS1	11178	genome.wustl.edu	37	8	20112432	20112432	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XPO7	23039	genome.wustl.edu	37	8	21843131	21843131	+	Silent	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS9	55756	genome.wustl.edu	37	8	28638445	28638445	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF122	79845	genome.wustl.edu	37	8	33406944	33406944	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNAI2	6591	genome.wustl.edu	37	8	49831459	49831459	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OPRK1	4986	genome.wustl.edu	37	8	54147414	54147414	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD7	55636	genome.wustl.edu	37	8	61765995	61765995	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LACTB2	51110	genome.wustl.edu	37	8	71553220	71553220	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FABP9	646480	genome.wustl.edu	37	8	82371490	82371490	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFPM2	23414	genome.wustl.edu	37	8	106801221	106801221	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPS1	7227	genome.wustl.edu	37	8	116631584	116631584	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP11B2	1585	genome.wustl.edu	37	8	143994060	143994060	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK2	3717	genome.wustl.edu	37	9	5089784	5089784	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLDC	2731	genome.wustl.edu	37	9	6533049	6533049	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FREM1	158326	genome.wustl.edu	37	9	14746951	14746951	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf23	138716	genome.wustl.edu	37	9	34610959	34610959	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLN1	7094	genome.wustl.edu	37	9	35703883	35703883	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH1B1	219	genome.wustl.edu	37	9	38397249	38397249	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM75A3	727830	genome.wustl.edu	37	9	40703031	40703031	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCNT1	2650	genome.wustl.edu	37	9	79117925	79117925	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM75D1	389763	genome.wustl.edu	37	9	84605990	84605990	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642943	642943	genome.wustl.edu	37	9	95650601	95650601	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCH1	5727	genome.wustl.edu	37	9	98218673	98218673	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF367	195828	genome.wustl.edu	37	9	99160475	99160475	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC441455	441455	genome.wustl.edu	37	9	99488769	99488769	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF462	58499	genome.wustl.edu	37	9	109688057	109688057	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPPA	5069	genome.wustl.edu	37	9	118950132	118950132	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAB2IP	153090	genome.wustl.edu	37	9	124532972	124532972	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANGPTL2	23452	genome.wustl.edu	37	9	129856160	129856160	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STXBP1	6812	genome.wustl.edu	37	9	130425628	130425628	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOR1B	27348	genome.wustl.edu	37	9	132569491	132569491	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMC3	10319	genome.wustl.edu	37	9	133952658	133952658	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACBD5	91452	genome.wustl.edu	37	10	27504518	27504518	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF37BP	100129482	genome.wustl.edu	37	10	43015744	43015744	+	RNA	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARCH8	220972	genome.wustl.edu	37	10	45959711	45959711	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OIT3	170392	genome.wustl.edu	37	10	74660192	74660192	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLG5	9231	genome.wustl.edu	37	10	79588731	79588731	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89712017	89712017	+	Splice_Site	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A28	81894	genome.wustl.edu	37	10	101372304	101372304	+	Silent	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADRA2A	150	genome.wustl.edu	37	10	112838979	112838979	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TACC2	10579	genome.wustl.edu	37	10	123843762	123843762	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAOX	196743	genome.wustl.edu	37	10	135193547	135193547	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNQ1	3784	genome.wustl.edu	37	11	2610068	2610068	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRAS2	22800	genome.wustl.edu	37	11	14303235	14303235	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE3B	5140	genome.wustl.edu	37	11	14666368	14666368	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAT10	55226	genome.wustl.edu	37	11	34129797	34129797	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYBPC3	4607	genome.wustl.edu	37	11	47372096	47372096	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWCE	220001	genome.wustl.edu	37	11	61053804	61053804	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBXN1	51035	genome.wustl.edu	37	11	62445826	62445826	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R5B	5526	genome.wustl.edu	37	11	64695604	64695604	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTN3	89	genome.wustl.edu	37	11	66319007	66319007	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PITPNM1	9600	genome.wustl.edu	37	11	67267697	67267697	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPPL1	3636	genome.wustl.edu	37	11	71945645	71945645	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO7A	4647	genome.wustl.edu	37	11	76893630	76893630	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1731	85459	genome.wustl.edu	37	11	93430823	93430823	+	Silent	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPC6	7225	genome.wustl.edu	37	11	101347072	101347072	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP5	838	genome.wustl.edu	37	11	104877843	104877843	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORL1	6653	genome.wustl.edu	37	11	121489588	121489588	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9B	22997	genome.wustl.edu	37	11	133790179	133790179	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNK1	65125	genome.wustl.edu	37	12	992632	992632	+	Silent	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA1	3736	genome.wustl.edu	37	12	5021678	5021678	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AICDA	57379	genome.wustl.edu	37	12	8757858	8757858	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WBP11	51729	genome.wustl.edu	37	12	14949872	14949872	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID2	196528	genome.wustl.edu	37	12	46230604	46230604	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL2A1	1280	genome.wustl.edu	37	12	48372131	48372131	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57554871	57554871	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPY19L2	283417	genome.wustl.edu	37	12	64057598	64057598	+	Silent	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VSIG10	54621	genome.wustl.edu	37	12	118520006	118520006	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMD9	5715	genome.wustl.edu	37	12	122340977	122340977	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH10	196385	genome.wustl.edu	37	12	124337795	124337795	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGC16384	114130	genome.wustl.edu	37	12	129299248	129299248	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIWIL1	9271	genome.wustl.edu	37	12	130842054	130842054	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC20	253832	genome.wustl.edu	37	13	21965918	21965918	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFHA1	221154	genome.wustl.edu	37	13	22140935	22140935	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTUS2	23281	genome.wustl.edu	37	13	29933576	29933576	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
N4BP2L2	10443	genome.wustl.edu	37	13	33016939	33016939	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP11	11215	genome.wustl.edu	37	13	42877795	42877795	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDADC1	81602	genome.wustl.edu	37	13	49848455	49848455	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPC6	10082	genome.wustl.edu	37	13	95034748	95034748	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB20	55647	genome.wustl.edu	37	13	111176157	111176157	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000136315	0	genome.wustl.edu	37	14	21388060	21388060	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD8	57680	genome.wustl.edu	37	14	21878149	21878149	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A8	23428	genome.wustl.edu	37	14	23608685	23608685	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOMEZ	57594	genome.wustl.edu	37	14	23745113	23745113	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC16B	90668	genome.wustl.edu	37	14	24523619	24523619	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIPK3	11035	genome.wustl.edu	37	14	24807178	24807178	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUT8	2530	genome.wustl.edu	37	14	66208947	66208947	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VSX2	338917	genome.wustl.edu	37	14	74727394	74727394	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLH3	27030	genome.wustl.edu	37	14	75516229	75516229	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC88C	440193	genome.wustl.edu	37	14	91779767	91779767	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB2	51676	genome.wustl.edu	37	14	94405723	94405723	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLK1	8788	genome.wustl.edu	37	14	101201179	101201179	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHD	3495	genome.wustl.edu	37	14	106307545	106307545	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC401805	401805	genome.wustl.edu	37	15	20832746	20832746	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR3	6263	genome.wustl.edu	37	15	33952410	33952410	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAPKBP1	23005	genome.wustl.edu	37	15	42104788	42104788	+	Nonsense_Mutation	SNP	C	C	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SQRDL	58472	genome.wustl.edu	37	15	45968397	45968397	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDC	3067	genome.wustl.edu	37	15	50534834	50534834	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C15orf39	56905	genome.wustl.edu	37	15	75499513	75499513	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSTPIP1	9051	genome.wustl.edu	37	15	77322884	77322884	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL46	26589	genome.wustl.edu	37	15	89008864	89008864	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS33B	26276	genome.wustl.edu	37	15	91543727	91543727	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440311	440311	genome.wustl.edu	37	15	95399668	95399668	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR90	197335	genome.wustl.edu	37	16	703523	703523	+	Splice_Site	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHBDL1	9028	genome.wustl.edu	37	16	727946	727946	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC154	645811	genome.wustl.edu	37	16	1493960	1493960	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFT140	9742	genome.wustl.edu	37	16	1652418	1652418	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HS3ST6	64711	genome.wustl.edu	37	16	1961835	1961835	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAP1	10131	genome.wustl.edu	37	16	3729730	3729730	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM192A	80011	genome.wustl.edu	37	16	57201101	57201101	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG4	25894	genome.wustl.edu	37	16	67316109	67316109	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RLTPR	146206	genome.wustl.edu	37	16	67688390	67688390	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A6	9057	genome.wustl.edu	37	16	68308966	68308966	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VAT1L	57687	genome.wustl.edu	37	16	77859281	77859281	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF8	10594	genome.wustl.edu	37	17	1562031	1562031	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZZEF1	23140	genome.wustl.edu	37	17	3992096	3992096	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLCN	201163	genome.wustl.edu	37	17	17131282	17131282	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LGALS9B	284194	genome.wustl.edu	37	17	20361677	20361677	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644988	644988	genome.wustl.edu	37	17	20744835	20744835	+	RNA	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC37BP1	147172	genome.wustl.edu	37	17	28958884	28958884	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATAD5	79915	genome.wustl.edu	37	17	29167746	29167746	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO1D	4642	genome.wustl.edu	37	17	31107762	31107762	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AP2B1	163	genome.wustl.edu	37	17	33977576	33977576	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT23	25984	genome.wustl.edu	37	17	39080731	39080731	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT38	8687	genome.wustl.edu	37	17	39593770	39593770	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MKS1	54903	genome.wustl.edu	37	17	56296056	56296056	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSEN54	283989	genome.wustl.edu	37	17	73520522	73520522	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD30B	374860	genome.wustl.edu	37	18	14764024	14764024	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C18orf10	25941	genome.wustl.edu	37	18	34408667	34408667	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO5B	4645	genome.wustl.edu	37	18	47480807	47480807	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCC	1630	genome.wustl.edu	37	18	50848461	50848461	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR7	23335	genome.wustl.edu	37	18	54339866	54339866	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF236	7776	genome.wustl.edu	37	18	74622022	74622022	+	Splice_Site	SNP	A	A	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALM	5064	genome.wustl.edu	37	19	727077	727077	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA7	10347	genome.wustl.edu	37	19	1046330	1046330	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOT1L	84444	genome.wustl.edu	37	19	2216525	2216525	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LMNB2	84823	genome.wustl.edu	37	19	2431802	2431802	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD24	170961	genome.wustl.edu	37	19	4208789	4208789	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPP9	91039	genome.wustl.edu	37	19	4685736	4685736	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH2D3A	10045	genome.wustl.edu	37	19	6754224	6754224	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2Z1	284383	genome.wustl.edu	37	19	8842333	8842333	+	Nonstop_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF846	162993	genome.wustl.edu	37	19	9868543	9868543	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYK2	7297	genome.wustl.edu	37	19	10464907	10464907	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCA4	6597	genome.wustl.edu	37	19	11123672	11123672	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX39A	10212	genome.wustl.edu	37	19	14521052	14521052	+	Silent	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CALR3	125972	genome.wustl.edu	37	19	16593374	16593374	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHERP	10523	genome.wustl.edu	37	19	16641586	16641586	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3K	27335	genome.wustl.edu	37	19	39116732	39116732	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K10	4294	genome.wustl.edu	37	19	40711893	40711893	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX34	9704	genome.wustl.edu	37	19	47883072	47883072	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIG1	3978	genome.wustl.edu	37	19	48624460	48624460	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR12	57479	genome.wustl.edu	37	19	50119029	50119029	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED25	81857	genome.wustl.edu	37	19	50332235	50332235	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC14	100049587	genome.wustl.edu	37	19	52147278	52147278	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF350	59348	genome.wustl.edu	37	19	52468942	52468942	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RDH13	112724	genome.wustl.edu	37	19	55556639	55556639	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP4	147945	genome.wustl.edu	37	19	56369555	56369555	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF135	7694	genome.wustl.edu	37	19	58579278	58579278	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IDH3B	3420	genome.wustl.edu	37	20	2644817	2644817	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMS4	140730	genome.wustl.edu	37	20	43386349	43386349	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARFGAP1	55738	genome.wustl.edu	37	20	61907460	61907460	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP16	10600	genome.wustl.edu	37	21	30409702	30409702	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADARB1	104	genome.wustl.edu	37	21	46603320	46603320	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000093100	0	genome.wustl.edu	37	22	18382183	18382183	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP18	11274	genome.wustl.edu	37	22	18652700	18652700	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AIFM3	150209	genome.wustl.edu	37	22	21327646	21327646	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287891	100287891	genome.wustl.edu	37	22	23241810	23241810	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PATZ1	23598	genome.wustl.edu	37	22	31741246	31741246	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEPDC5	9681	genome.wustl.edu	37	22	32302245	32302245	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYN3	8224	genome.wustl.edu	37	22	32937624	32937624	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM5	4174	genome.wustl.edu	37	22	35796455	35796455	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNJ4	3761	genome.wustl.edu	37	22	38823649	38823649	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0930	23313	genome.wustl.edu	37	22	45601566	45601566	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM118A	55007	genome.wustl.edu	37	22	45719234	45719234	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBED4	9889	genome.wustl.edu	37	22	50277523	50277523	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBF1	6305	genome.wustl.edu	37	22	50900532	50900532	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIGA	5277	genome.wustl.edu	37	X	15349444	15349444	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZRSR2	8233	genome.wustl.edu	37	X	15841226	15841226	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BEND2	139105	genome.wustl.edu	37	X	18198721	18198721	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000237836	0	genome.wustl.edu	37	X	18911458	18911458	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHKA2	5256	genome.wustl.edu	37	X	18926138	18926138	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FTHL17	53940	genome.wustl.edu	37	X	31089528	31089528	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APEX2	27301	genome.wustl.edu	37	X	55027009	55027009	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLG3	1741	genome.wustl.edu	37	X	69668801	69668801	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR174	84636	genome.wustl.edu	37	X	78427451	78427451	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A6	1288	genome.wustl.edu	37	X	107422034	107422034	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL13	90293	genome.wustl.edu	37	X	117043367	117043367	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUL4B	8450	genome.wustl.edu	37	X	119675503	119675503	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTRT1	139741	genome.wustl.edu	37	X	127185447	127185447	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA3	55558	genome.wustl.edu	37	X	153694105	153694105	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPP1	4354	genome.wustl.edu	37	X	154012303	154012303	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF207	388591	genome.wustl.edu	37	1	6269243	6269243	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF10L	55160	genome.wustl.edu	37	1	17982383	17982383	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZYG11A	440590	genome.wustl.edu	37	1	53308609	53308609	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F3	2152	genome.wustl.edu	37	1	94996100	94996100	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC388692	388692	genome.wustl.edu	37	1	149282646	149282646	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS72	6944	genome.wustl.edu	37	1	151149369	151149369	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX9	56956	genome.wustl.edu	37	1	197889148	197889148	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN14	5784	genome.wustl.edu	37	1	214560201	214560201	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53I3	9540	genome.wustl.edu	37	2	24303662	24303662	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGPD3	653489	genome.wustl.edu	37	2	107040695	107040695	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFSD6	54842	genome.wustl.edu	37	2	191301029	191301029	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EEFSEC	60678	genome.wustl.edu	37	3	128060156	128060156	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB7A	7879	genome.wustl.edu	37	3	128525227	128525227	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC5	10057	genome.wustl.edu	37	3	183663705	183663705	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL25A1	84570	genome.wustl.edu	37	4	109784500	109784500	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDCD6	10016	genome.wustl.edu	37	5	306868	306868	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf24	134553	genome.wustl.edu	37	5	134190858	134190858	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB3	56132	genome.wustl.edu	37	5	140481136	140481136	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS2	9509	genome.wustl.edu	37	5	178554963	178554963	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL12A1	1303	genome.wustl.edu	37	6	75844500	75844500	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNE1	23345	genome.wustl.edu	37	6	152464786	152464786	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARD11	84433	genome.wustl.edu	37	7	2946424	2946424	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBLL1	79872	genome.wustl.edu	37	7	107398712	107398712	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK2	3717	genome.wustl.edu	37	9	5080679	5080679	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1797	54914	genome.wustl.edu	37	9	20978378	20978378	+	Silent	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AUH	549	genome.wustl.edu	37	9	93983250	93983250	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP54	159195	genome.wustl.edu	37	10	75264669	75264669	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51S1	119692	genome.wustl.edu	37	11	4870410	4870410	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf84	144097	genome.wustl.edu	37	11	63585820	63585820	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHOX2A	401	genome.wustl.edu	37	11	71952230	71952230	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX11	1663	genome.wustl.edu	37	12	31242866	31242866	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO1A	4640	genome.wustl.edu	37	12	57441828	57441828	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf26	84190	genome.wustl.edu	37	12	82752426	82752426	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf51	283450	genome.wustl.edu	37	12	112631398	112631398	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM123A	219287	genome.wustl.edu	37	13	25744274	25744274	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKH	160851	genome.wustl.edu	37	13	42733430	42733430	+	Silent	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH6	4624	genome.wustl.edu	37	14	23865524	23865524	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECTD1	25831	genome.wustl.edu	37	14	31592198	31592198	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPHB5	122876	genome.wustl.edu	37	14	63784385	63784385	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR3	6263	genome.wustl.edu	37	15	34018618	34018618	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO5A	4644	genome.wustl.edu	37	15	52632509	52632509	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247333	0	genome.wustl.edu	37	15	64665913	64665913	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EDC3	80153	genome.wustl.edu	37	15	74925119	74925119	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFTUD1	79631	genome.wustl.edu	37	15	82450100	82450100	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000185864	0	genome.wustl.edu	37	16	21854828	21854828	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMCO7	79613	genome.wustl.edu	37	16	68943227	68943227	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKD1L3	342372	genome.wustl.edu	37	16	72020277	72020277	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPV1	7442	genome.wustl.edu	37	17	3493227	3493227	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFSF12	8742	genome.wustl.edu	37	17	7460557	7460557	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX40P1	653645	genome.wustl.edu	37	17	58066651	58066651	+	RNA	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRS	5802	genome.wustl.edu	37	19	5210528	5210528	+	Silent	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALM3	342979	genome.wustl.edu	37	19	14165732	14165732	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF540	163255	genome.wustl.edu	37	19	38103610	38103610	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUMBL	9253	genome.wustl.edu	37	19	41173889	41173889	+	Silent	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIR3DL1	3811	genome.wustl.edu	37	19	55329941	55329941	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYBL2	4605	genome.wustl.edu	37	20	42331292	42331292	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMGB1P1	10357	genome.wustl.edu	37	20	56063511	56063511	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf20	55257	genome.wustl.edu	37	20	61430980	61430980	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNJ6	3763	genome.wustl.edu	37	21	39086713	39086713	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210100	0	genome.wustl.edu	37	MT	4284	4284	+	RNA	SNP	G	G	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf144	26099	genome.wustl.edu	37	1	16717910	16717910	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27097622	27097622	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000212541	0	genome.wustl.edu	37	1	38457206	38457207	+	RNA	DEL	AA	AA	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK1	3716	genome.wustl.edu	37	1	65306997	65306997	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SV2A	9900	genome.wustl.edu	37	1	149884981	149884981	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IPO9	55705	genome.wustl.edu	37	1	201824988	201824988	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA2	5362	genome.wustl.edu	37	1	208315787	208315787	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM17	51127	genome.wustl.edu	37	1	228596779	228596779	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYST	1130	genome.wustl.edu	37	1	235860536	235860536	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CGREF1	10669	genome.wustl.edu	37	2	27324288	27324289	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf71	388939	genome.wustl.edu	37	2	29294830	29294830	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WBP1	23559	genome.wustl.edu	37	2	74687410	74687410	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GGT8P	645367	genome.wustl.edu	37	2	91968647	91968647	+	RNA	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACVR2A	92	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A6	6533	genome.wustl.edu	37	3	14513785	14513785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUCLG2	8801	genome.wustl.edu	37	3	67570954	67570955	+	Frame_Shift_Ins	INS	-	-	C			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTN3	5067	genome.wustl.edu	37	3	74548856	74548856	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARGFX	503582	genome.wustl.edu	37	3	121305000	121305000	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
G3BP2	9908	genome.wustl.edu	37	4	76570838	76570838	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAPP1	27071	genome.wustl.edu	37	4	100756888	100756889	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC24D	9871	genome.wustl.edu	37	4	119652492	119652492	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL2	11275	genome.wustl.edu	37	4	166220777	166220777	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPD7	11044	genome.wustl.edu	37	5	6755012	6755013	+	Frame_Shift_Ins	INS	-	-	AC			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591135	67591135	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOBTB3	22836	genome.wustl.edu	37	5	95067839	95067839	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LARP1	23367	genome.wustl.edu	37	5	154135745	154135745	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDC1	9656	genome.wustl.edu	37	6	30672929	30672929	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPATS1	221409	genome.wustl.edu	37	6	44320525	44320526	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	AA	AA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCART3P	442229	genome.wustl.edu	37	6	66498991	66498991	+	RNA	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTAGE9	643854	genome.wustl.edu	37	6	132031981	132031982	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRP44L	51660	genome.wustl.edu	37	6	166780384	166780384	+	Splice_Site	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWDE	221806	genome.wustl.edu	37	7	12410416	12410417	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMDEC1	27299	genome.wustl.edu	37	8	24257686	24257686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HGSNAT	138050	genome.wustl.edu	37	8	43002099	43002099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A13	157724	genome.wustl.edu	37	8	87229784	87229784	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL38	340359	genome.wustl.edu	37	8	124657995	124657995	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247396	0	genome.wustl.edu	37	8	143740123	143740123	+	RNA	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100133062	100133062	genome.wustl.edu	37	9	500510	500510	+	RNA	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF3	83860	genome.wustl.edu	37	10	8006929	8006929	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63850710	63850711	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGR2	1959	genome.wustl.edu	37	10	64573570	64573570	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIPSL	266971	genome.wustl.edu	37	10	95720553	95720553	+	RNA	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP160	23279	genome.wustl.edu	37	11	47861981	47861982	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC42BPG	55561	genome.wustl.edu	37	11	64591974	64591974	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXM1	2305	genome.wustl.edu	37	12	2968195	2968196	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	CC	CC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD6	114785	genome.wustl.edu	37	12	57921401	57921401	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100130776	100130776	genome.wustl.edu	37	12	58122040	58122040	+	RNA	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STK24	8428	genome.wustl.edu	37	13	99114125	99114125	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPA2	81614	genome.wustl.edu	37	15	23021239	23021239	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATXN2L	11273	genome.wustl.edu	37	16	28847350	28847350	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF40	9810	genome.wustl.edu	37	16	30780216	30780218	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	AAG	AAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOK4	55715	genome.wustl.edu	37	16	57507340	57507341	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC36	55282	genome.wustl.edu	37	16	67381488	67381488	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67663409	67663409	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC12A4	6560	genome.wustl.edu	37	16	67986298	67986298	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC7	7266	genome.wustl.edu	37	17	40134398	40134398	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMUB2	79089	genome.wustl.edu	37	17	42266733	42266733	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644157	644157	genome.wustl.edu	37	17	43663214	43663214	+	RNA	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPSAP1	5635	genome.wustl.edu	37	17	74324830	74324830	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288221	100288221	genome.wustl.edu	37	19	7926938	7926938	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF563	147837	genome.wustl.edu	37	19	12430130	12430130	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRTC1	23373	genome.wustl.edu	37	19	18887993	18887993	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF579	163033	genome.wustl.edu	37	19	56090215	56090215	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RALY	22913	genome.wustl.edu	37	20	32664864	32664865	+	In_Frame_Ins	INS	-	-	CAG			TCGA-D1-A17U-01	TCGA-D1-A17U-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCNT	5116	genome.wustl.edu	37	21	47858077	47858077	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR5-ARHGAP8	553158	genome.wustl.edu	37	22	45243866	45243866	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSPYL2	64061	genome.wustl.edu	37	X	53115503	53115503	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17U-01	TCGA-D1-A17U-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
