Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ARID1A	8289	genome.wustl.edu	37	1	27107105	27107105	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCL9	607	genome.wustl.edu	37	1	147096117	147096117	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKP1	5317	genome.wustl.edu	37	1	201288983	201288983	+	Silent	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALNT14	79623	genome.wustl.edu	37	2	31133839	31133839	+	Silent	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIRP2	129446	genome.wustl.edu	37	2	168103963	168103963	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179478885	179478885	+	Silent	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALS2	57679	genome.wustl.edu	37	2	202572613	202572613	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP210	23225	genome.wustl.edu	37	3	13377058	13377058	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA1	5361	genome.wustl.edu	37	3	126736462	126736462	+	Silent	SNP	C	C	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT14L	401135	genome.wustl.edu	37	4	68928686	68928686	+	RNA	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANTXR2	118429	genome.wustl.edu	37	4	80898779	80898779	+	Missense_Mutation	SNP	T	T	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SKIV2L2	23517	genome.wustl.edu	37	5	54635988	54635988	+	Silent	SNP	A	A	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIP1	3092	genome.wustl.edu	37	7	75189186	75189186	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP2	26047	genome.wustl.edu	37	7	147844678	147844678	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EZH2	2146	genome.wustl.edu	37	7	148514368	148514368	+	Nonsense_Mutation	SNP	G	G	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSPO	23145	genome.wustl.edu	37	7	149477454	149477454	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD1	64478	genome.wustl.edu	37	8	3265577	3265577	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HR	55806	genome.wustl.edu	37	8	21979148	21979148	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249202	0	genome.wustl.edu	37	9	130255052	130255052	+	RNA	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCBD1	5092	genome.wustl.edu	37	10	72643772	72643772	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAS2R13	50838	genome.wustl.edu	37	12	11061487	11061487	+	Silent	SNP	G	G	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSAD	51380	genome.wustl.edu	37	12	53553926	53553926	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP9	64333	genome.wustl.edu	37	12	57872934	57872934	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCTD10	83892	genome.wustl.edu	37	12	109889536	109889536	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDSL	113675	genome.wustl.edu	37	12	113871964	113871964	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BDKRB2	624	genome.wustl.edu	37	14	96707048	96707048	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABAT	18	genome.wustl.edu	37	16	8858686	8858686	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARVELD3	91862	genome.wustl.edu	37	16	71668441	71668441	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287245	100287245	genome.wustl.edu	37	17	30762354	30762354	+	RNA	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKFN1	162282	genome.wustl.edu	37	17	54403675	54403675	+	Silent	SNP	A	A	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC16	94025	genome.wustl.edu	37	19	9073176	9073176	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC5A5	6528	genome.wustl.edu	37	19	18001755	18001755	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF606	80095	genome.wustl.edu	37	19	58490830	58490830	+	Silent	SNP	C	C	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROKR2	128674	genome.wustl.edu	37	20	5294673	5294673	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGCR8	54487	genome.wustl.edu	37	22	20079118	20079118	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3H7B	23264	genome.wustl.edu	37	22	41752792	41752792	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRO	7216	genome.wustl.edu	37	X	54950037	54950037	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR112	139378	genome.wustl.edu	37	X	135430967	135430967	+	Nonsense_Mutation	SNP	C	C	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF11	9826	genome.wustl.edu	37	1	156949025	156949025	+	Missense_Mutation	SNP	G	G	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WASH2P	375260	genome.wustl.edu	37	2	114355998	114355998	+	RNA	SNP	C	C	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179393347	179393347	+	Nonsense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC150	284992	genome.wustl.edu	37	2	197530399	197530399	+	Nonsense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFF	56947	genome.wustl.edu	37	2	228221828	228221828	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K1	4214	genome.wustl.edu	37	5	56161690	56161690	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYFIP2	26999	genome.wustl.edu	37	5	156817650	156817650	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSE	29940	genome.wustl.edu	37	6	116757323	116757323	+	Silent	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPSR1	387129	genome.wustl.edu	37	7	34724220	34724220	+	Silent	SNP	C	C	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRRAP	8295	genome.wustl.edu	37	7	98609014	98609014	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM135B	51059	genome.wustl.edu	37	8	139190825	139190825	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STK32C	282974	genome.wustl.edu	37	10	134036465	134036465	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1268804	1268804	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4A16	81327	genome.wustl.edu	37	11	55111246	55111246	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGR	5241	genome.wustl.edu	37	11	100933192	100933192	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC2H1	79659	genome.wustl.edu	37	11	102980397	102980397	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8D2	283160	genome.wustl.edu	37	11	124189683	124189683	+	Silent	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4M1	441670	genome.wustl.edu	37	14	20249106	20249106	+	Missense_Mutation	SNP	G	G	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC30A4	7782	genome.wustl.edu	37	15	45777386	45777386	+	Missense_Mutation	SNP	G	G	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
E2F4	1874	genome.wustl.edu	37	16	67231931	67231931	+	Missense_Mutation	SNP	C	C	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC47	57003	genome.wustl.edu	37	17	61843400	61843400	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA8	10351	genome.wustl.edu	37	17	66881445	66881445	+	Silent	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTIF	9811	genome.wustl.edu	37	18	46146000	46146000	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNA11	2767	genome.wustl.edu	37	19	3113330	3113330	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBN3	84467	genome.wustl.edu	37	19	8161815	8161815	+	Missense_Mutation	SNP	C	C	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4F2	8529	genome.wustl.edu	37	19	15989736	15989736	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL12RB1	3594	genome.wustl.edu	37	19	18174729	18174729	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITSN1	6453	genome.wustl.edu	37	21	35144400	35144400	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEZ6L	23544	genome.wustl.edu	37	22	26706651	26706651	+	Silent	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERHL2	253190	genome.wustl.edu	37	22	42950994	42950994	+	Missense_Mutation	SNP	A	A	G			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MT-CO2	0	genome.wustl.edu	37	MT	7847	7847	+	Missense_Mutation	SNP	G	G	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	12713	12713	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	12725	12725	+	Missense_Mutation	SNP	T	T	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYLC1	1538	genome.wustl.edu	37	X	83128725	83128725	+	Missense_Mutation	SNP	T	T	A			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGF13	2258	genome.wustl.edu	37	X	137715055	137715055	+	Missense_Mutation	SNP	C	C	T			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGFR2	2263	genome.wustl.edu	37	10	123279677	123279677	+	Missense_Mutation	SNP	G	G	C			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717626	89717626	+	Frame_Shift_Del	DEL	C	C	-			TCGA-A5-A0GQ-01	TCGA-A5-A0GQ-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
