Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CHD5	26038	genome.wustl.edu	37	1	6206464	6206464	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF1B	23095	genome.wustl.edu	37	1	10357111	10357111	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGD	5226	genome.wustl.edu	37	1	10479585	10479585	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS13D	55187	genome.wustl.edu	37	1	12403039	12403039	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP9	842	genome.wustl.edu	37	1	15831170	15831170	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF4G3	8672	genome.wustl.edu	37	1	21307734	21307734	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSPG2	3339	genome.wustl.edu	37	1	22175257	22175257	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB40	9923	genome.wustl.edu	37	1	22848120	22848120	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNRNPR	10236	genome.wustl.edu	37	1	23640165	23640165	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAP3	55616	genome.wustl.edu	37	1	23782465	23782465	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCEB3	6924	genome.wustl.edu	37	1	24078119	24078119	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCEB3	6924	genome.wustl.edu	37	1	24080909	24080909	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM46B	115572	genome.wustl.edu	37	1	27333172	27333172	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHDC1	27245	genome.wustl.edu	37	1	27878265	27878265	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRU	10076	genome.wustl.edu	37	1	29585086	29585086	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3I	8668	genome.wustl.edu	37	1	32689634	32689634	+	Splice_Site	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD2	114784	genome.wustl.edu	37	1	34080137	34080137	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYM4	9202	genome.wustl.edu	37	1	35884069	35884069	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2C4	192670	genome.wustl.edu	37	1	36316480	36316480	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2C1	26523	genome.wustl.edu	37	1	36359938	36359938	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MACF1	23499	genome.wustl.edu	37	1	39854195	39854195	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0754	643314	genome.wustl.edu	37	1	39878252	39878252	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFYC	4802	genome.wustl.edu	37	1	41218880	41218880	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLFNL1	200172	genome.wustl.edu	37	1	41486224	41486224	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIVEP3	59269	genome.wustl.edu	37	1	42045494	42045494	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXJ3	22887	genome.wustl.edu	37	1	42657002	42657002	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TIE1	7075	genome.wustl.edu	37	1	43779616	43779616	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPL	4352	genome.wustl.edu	37	1	43803529	43803529	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SZT2	23334	genome.wustl.edu	37	1	43912625	43912625	+	Splice_Site	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRF	5792	genome.wustl.edu	37	1	44019487	44019487	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HECTD3	79654	genome.wustl.edu	37	1	45475781	45475781	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUTYH	4595	genome.wustl.edu	37	1	45796861	45796861	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGBL4	84871	genome.wustl.edu	37	1	49511378	49511378	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZCCHC11	23318	genome.wustl.edu	37	1	52901119	52901119	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM159A	348378	genome.wustl.edu	37	1	53122681	53122681	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM59	9528	genome.wustl.edu	37	1	54506481	54506481	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACHD1	57685	genome.wustl.edu	37	1	65157238	65157238	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK1	3716	genome.wustl.edu	37	1	65325866	65325866	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZZZ3	26009	genome.wustl.edu	37	1	78034150	78034150	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH3GLB1	51100	genome.wustl.edu	37	1	87188272	87188272	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC400759	400759	genome.wustl.edu	37	1	89875982	89875982	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GEMIN8P4	492303	genome.wustl.edu	37	1	90459106	90459106	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GEMIN8P4	492303	genome.wustl.edu	37	1	90459860	90459860	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC18	343099	genome.wustl.edu	37	1	93705403	93705403	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VCAM1	7412	genome.wustl.edu	37	1	101198223	101198223	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYPL2	284612	genome.wustl.edu	37	1	110019434	110019434	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRIF1	55791	genome.wustl.edu	37	1	111490908	111490908	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DRAM2	128338	genome.wustl.edu	37	1	111663136	111663136	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTTNBP2NL	55917	genome.wustl.edu	37	1	112998925	112998925	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSDE1	7812	genome.wustl.edu	37	1	115280120	115280120	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249401	0	genome.wustl.edu	37	1	120077012	120077012	+	RNA	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC391081	391081	genome.wustl.edu	37	1	120151367	120151367	+	RNA	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC391081	391081	genome.wustl.edu	37	1	120151813	120151813	+	RNA	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD35	148741	genome.wustl.edu	37	1	145558889	145558889	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR11	10903	genome.wustl.edu	37	1	149901144	149901144	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPRD2	23248	genome.wustl.edu	37	1	150444303	150444303	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPRD2	23248	genome.wustl.edu	37	1	150444616	150444616	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETDB1	9869	genome.wustl.edu	37	1	150933142	150933142	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC42SE1	56882	genome.wustl.edu	37	1	151027539	151027539	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CGN	57530	genome.wustl.edu	37	1	151509213	151509213	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCHHL1	126637	genome.wustl.edu	37	1	152059336	152059336	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCHHL1	126637	genome.wustl.edu	37	1	152059713	152059713	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLG	2312	genome.wustl.edu	37	1	152277218	152277218	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLG	2312	genome.wustl.edu	37	1	152280810	152280810	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM46	80128	genome.wustl.edu	37	1	155148678	155148678	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCN3	57657	genome.wustl.edu	37	1	155257117	155257117	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0907	22889	genome.wustl.edu	37	1	155893424	155893424	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMA4A	64218	genome.wustl.edu	37	1	156142782	156142782	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INSRR	3645	genome.wustl.edu	37	1	156812197	156812197	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF11	9826	genome.wustl.edu	37	1	157014101	157014101	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR10K1	391109	genome.wustl.edu	37	1	158435545	158435545	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTA1	6708	genome.wustl.edu	37	1	158617423	158617423	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6N2	81442	genome.wustl.edu	37	1	158747371	158747371	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYHIN1	149628	genome.wustl.edu	37	1	158909226	158909226	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A4	480	genome.wustl.edu	37	1	160141197	160141197	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A4	480	genome.wustl.edu	37	1	160143944	160143944	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PVRL4	81607	genome.wustl.edu	37	1	161044092	161044092	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RCSD1	92241	genome.wustl.edu	37	1	167653239	167653239	+	Splice_Site	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRC2C	23215	genome.wustl.edu	37	1	171501888	171501888	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM5B	57795	genome.wustl.edu	37	1	177250068	177250068	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1E	777	genome.wustl.edu	37	1	181741295	181741295	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMC2	3918	genome.wustl.edu	37	1	183204730	183204730	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UCHL5	51377	genome.wustl.edu	37	1	192992122	192992122	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F13B	2165	genome.wustl.edu	37	1	197019903	197019903	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSTYK	25778	genome.wustl.edu	37	1	205129297	205129297	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK18	5129	genome.wustl.edu	37	1	205498672	205498672	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RCOR3	55758	genome.wustl.edu	37	1	211462694	211462694	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HHIPL2	79802	genome.wustl.edu	37	1	222717458	222717458	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARP1	142	genome.wustl.edu	37	1	226564834	226564834	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228466933	228466933	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM17	51127	genome.wustl.edu	37	1	228602418	228602418	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP133	55746	genome.wustl.edu	37	1	229601226	229601226	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
URB2	9816	genome.wustl.edu	37	1	229773830	229773830	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYST	1130	genome.wustl.edu	37	1	235872587	235872587	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF670	93474	genome.wustl.edu	37	1	247201353	247201353	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF669	79862	genome.wustl.edu	37	1	247264614	247264614	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR14K1	343170	genome.wustl.edu	37	1	247902074	247902074	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM58	25893	genome.wustl.edu	37	1	248023926	248023926	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2T12	127064	genome.wustl.edu	37	1	248458244	248458244	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC15	51112	genome.wustl.edu	37	2	3464076	3464076	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GREB1	9687	genome.wustl.edu	37	2	11767168	11767168	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUM2	23369	genome.wustl.edu	37	2	20494158	20494158	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf43	60526	genome.wustl.edu	37	2	20990056	20990056	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATAD2B	54454	genome.wustl.edu	37	2	23985080	23985080	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASXL2	55252	genome.wustl.edu	37	2	25966176	25966176	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EMILIN1	11117	genome.wustl.edu	37	2	27308544	27308544	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFT172	26160	genome.wustl.edu	37	2	27707933	27707933	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF512	84450	genome.wustl.edu	37	2	27826144	27826144	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRE	9577	genome.wustl.edu	37	2	28248229	28248229	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASGRP3	25780	genome.wustl.edu	37	2	33741705	33741705	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX57	90957	genome.wustl.edu	37	2	39089364	39089364	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKDCC	91461	genome.wustl.edu	37	2	42281210	42281210	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP34	9736	genome.wustl.edu	37	2	61415811	61415811	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTX1	5013	genome.wustl.edu	37	2	63282728	63282728	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GKN1	56287	genome.wustl.edu	37	2	69207071	69207071	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf42	54980	genome.wustl.edu	37	2	70387891	70387891	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP6V1B1	525	genome.wustl.edu	37	2	71190748	71190748	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYSF	8291	genome.wustl.edu	37	2	71840533	71840533	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCTN1	1639	genome.wustl.edu	37	2	74596485	74596485	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC142	84865	genome.wustl.edu	37	2	74708588	74708588	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC730268	730268	genome.wustl.edu	37	2	88019376	88019376	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMYD1	150572	genome.wustl.edu	37	2	88402646	88402646	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGKV2D-28	28883	genome.wustl.edu	37	2	89999466	89999466	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD20A8P	729171	genome.wustl.edu	37	2	95497772	95497772	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A2	6549	genome.wustl.edu	37	2	103324647	103324647	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPS9	64965	genome.wustl.edu	37	2	105708992	105708992	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP2	5903	genome.wustl.edu	37	2	109400237	109400237	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPB41L5	57669	genome.wustl.edu	37	2	120857849	120857849	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI2	2736	genome.wustl.edu	37	2	121708924	121708924	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTNAP5	129684	genome.wustl.edu	37	2	125671701	125671701	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO7B	4648	genome.wustl.edu	37	2	128366304	128366304	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POTEF	728378	genome.wustl.edu	37	2	130832048	130832048	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMPD4	55627	genome.wustl.edu	37	2	130910683	130910683	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC150786	150786	genome.wustl.edu	37	2	132120672	132120672	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR39	2863	genome.wustl.edu	37	2	133175213	133175213	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD5	55777	genome.wustl.edu	37	2	149226988	149226988	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD5	55777	genome.wustl.edu	37	2	149228063	149228063	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152522902	152522902	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEB	4703	genome.wustl.edu	37	2	152548783	152548783	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGB6	3694	genome.wustl.edu	37	2	160958313	160958313	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN9A	6335	genome.wustl.edu	37	2	167060465	167060465	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLX1	1745	genome.wustl.edu	37	2	172951605	172951605	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGA6	3655	genome.wustl.edu	37	2	173356014	173356014	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WIPF1	7456	genome.wustl.edu	37	2	175436493	175436493	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WIPF1	7456	genome.wustl.edu	37	2	175439940	175439940	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL6	114880	genome.wustl.edu	37	2	179238672	179238672	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179427224	179427224	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179437785	179437785	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179444953	179444953	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179639077	179639077	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179640624	179640624	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBE2E3	10477	genome.wustl.edu	37	2	181925492	181925492	+	Nonsense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC10	54431	genome.wustl.edu	37	2	183641852	183641852	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLS	2744	genome.wustl.edu	37	2	191775025	191775025	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAT1	6772	genome.wustl.edu	37	2	191844500	191844500	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGOL2	151246	genome.wustl.edu	37	2	201438120	201438120	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHM3	389072	genome.wustl.edu	37	2	208811148	208811148	+	Nonstop_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf67	151050	genome.wustl.edu	37	2	210908786	210908786	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FN1	2335	genome.wustl.edu	37	2	216271057	216271057	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRYBA2	1412	genome.wustl.edu	37	2	219854993	219854993	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DES	1674	genome.wustl.edu	37	2	220286159	220286159	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GMPPA	29926	genome.wustl.edu	37	2	220369948	220369948	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A4	1286	genome.wustl.edu	37	2	227907842	227907842	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL4A3	1285	genome.wustl.edu	37	2	228147183	228147183	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C2orf57	165100	genome.wustl.edu	37	2	232458014	232458014	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF4E2	9470	genome.wustl.edu	37	2	233431537	233431537	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL6A3	1293	genome.wustl.edu	37	2	238296286	238296286	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PER2	8864	genome.wustl.edu	37	2	239159208	239159208	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6B3	150681	genome.wustl.edu	37	2	240984995	240984995	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R7	5510	genome.wustl.edu	37	2	242099901	242099901	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHL1	10752	genome.wustl.edu	37	3	391175	391175	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRBN	51185	genome.wustl.edu	37	3	3192700	3192700	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OGG1	4968	genome.wustl.edu	37	3	9798808	9798808	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIP2	80852	genome.wustl.edu	37	3	14561919	14561919	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf20	84077	genome.wustl.edu	37	3	14768504	14768504	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAPN7	23473	genome.wustl.edu	37	3	15292436	15292436	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SATB1	6304	genome.wustl.edu	37	3	18390845	18390845	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMS3	27303	genome.wustl.edu	37	3	29628650	29628650	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL10	114884	genome.wustl.edu	37	3	31774787	31774787	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL10	114884	genome.wustl.edu	37	3	31789495	31789495	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBP1	7342	genome.wustl.edu	37	3	33434837	33434837	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLH1	4292	genome.wustl.edu	37	3	37035049	37035049	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA4	2803	genome.wustl.edu	37	3	37366388	37366388	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OXSR1	9943	genome.wustl.edu	37	3	38263171	38263171	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN5A	6331	genome.wustl.edu	37	3	38591892	38591892	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN11A	11280	genome.wustl.edu	37	3	38913712	38913712	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF621	285268	genome.wustl.edu	37	3	40573648	40573648	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41278187	41278187	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VIPR1	7433	genome.wustl.edu	37	3	42569606	42569606	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LZTFL1	54585	genome.wustl.edu	37	3	45872571	45872571	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCC1	6599	genome.wustl.edu	37	3	47663719	47663719	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATRIP	84126	genome.wustl.edu	37	3	48500825	48500825	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A20	788	genome.wustl.edu	37	3	48929457	48929457	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QRICH1	54870	genome.wustl.edu	37	3	49094887	49094887	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QARS	5859	genome.wustl.edu	37	3	49136579	49136579	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP19	10869	genome.wustl.edu	37	3	49148292	49148292	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP19	10869	genome.wustl.edu	37	3	49153548	49153548	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMB2	3913	genome.wustl.edu	37	3	49169735	49169735	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC71	64925	genome.wustl.edu	37	3	49200595	49200595	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000236980	0	genome.wustl.edu	37	3	49227456	49227456	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCTA	6988	genome.wustl.edu	37	3	49450062	49450062	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM6	10180	genome.wustl.edu	37	3	50036897	50036897	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM6	10180	genome.wustl.edu	37	3	50098913	50098913	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM5	10181	genome.wustl.edu	37	3	50129619	50129619	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM5	10181	genome.wustl.edu	37	3	50148203	50148203	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH1	25981	genome.wustl.edu	37	3	52398968	52398968	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PBRM1	55193	genome.wustl.edu	37	3	52643435	52643435	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PBRM1	55193	genome.wustl.edu	37	3	52713669	52713669	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1D	776	genome.wustl.edu	37	3	53774344	53774344	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf63	23272	genome.wustl.edu	37	3	56662571	56662571	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRICKLE2	166336	genome.wustl.edu	37	3	64085229	64085229	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROS1	5627	genome.wustl.edu	37	3	93593227	93593227	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STX19	415117	genome.wustl.edu	37	3	93733612	93733612	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA6	285220	genome.wustl.edu	37	3	96962907	96962907	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SENP7	57337	genome.wustl.edu	37	3	101056353	101056353	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALCAM	214	genome.wustl.edu	37	3	105243160	105243160	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1524	57650	genome.wustl.edu	37	3	108288347	108288347	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAT1	50852	genome.wustl.edu	37	3	108565928	108565928	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABHD10	55347	genome.wustl.edu	37	3	111705216	111705216	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC23	254887	genome.wustl.edu	37	3	113677366	113677366	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QTRTD1	79691	genome.wustl.edu	37	3	113804641	113804641	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C3orf15	89876	genome.wustl.edu	37	3	119456277	119456277	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGB1	2804	genome.wustl.edu	37	3	121388078	121388078	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DTX3L	151636	genome.wustl.edu	37	3	122287407	122287407	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC14	64770	genome.wustl.edu	37	3	123649993	123649993	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KALRN	8997	genome.wustl.edu	37	3	124053178	124053178	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC12A8	84561	genome.wustl.edu	37	3	124906100	124906100	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL11	114885	genome.wustl.edu	37	3	125266399	125266399	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COPG	22820	genome.wustl.edu	37	3	128973581	128973581	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOPBP1	11073	genome.wustl.edu	37	3	133371475	133371475	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOPBP1	11073	genome.wustl.edu	37	3	133376752	133376752	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MSL2	55167	genome.wustl.edu	37	3	135871056	135871056	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCCB	5096	genome.wustl.edu	37	3	136035898	136035898	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAG1	10274	genome.wustl.edu	37	3	136087948	136087948	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAG1	10274	genome.wustl.edu	37	3	136141655	136141655	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DBR1	51163	genome.wustl.edu	37	3	137893551	137893551	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATR	545	genome.wustl.edu	37	3	142178126	142178126	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATR	545	genome.wustl.edu	37	3	142272178	142272178	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFN2	5217	genome.wustl.edu	37	3	149686143	149686143	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM194A	131831	genome.wustl.edu	37	3	150421525	150421525	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AADACL2	344752	genome.wustl.edu	37	3	151463353	151463353	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SI	6476	genome.wustl.edu	37	3	164700035	164700035	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNDC3B	64778	genome.wustl.edu	37	3	171830319	171830319	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCEH1	57552	genome.wustl.edu	37	3	172351434	172351434	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178947161	178947161	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178952074	178952074	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFN1	55669	genome.wustl.edu	37	3	179093118	179093118	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC39	339829	genome.wustl.edu	37	3	180365007	180365007	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCF3	55324	genome.wustl.edu	37	3	183905932	183905932	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHB3	2049	genome.wustl.edu	37	3	184290537	184290537	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS8	23355	genome.wustl.edu	37	3	184584687	184584687	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHHADH	1962	genome.wustl.edu	37	3	184910766	184910766	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100130481	100130481	genome.wustl.edu	37	3	190432808	190432808	+	RNA	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP13A3	79572	genome.wustl.edu	37	3	194169199	194169199	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LSG1	55341	genome.wustl.edu	37	3	194366921	194366921	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MFI2	4241	genome.wustl.edu	37	3	196753609	196753609	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRCH3	84859	genome.wustl.edu	37	3	197598258	197598258	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLN	353497	genome.wustl.edu	37	4	2097640	2097640	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EVC2	132884	genome.wustl.edu	37	4	5586506	5586506	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORCS2	57537	genome.wustl.edu	37	4	7533312	7533312	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF518B	85460	genome.wustl.edu	37	4	10446094	10446094	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF518B	85460	genome.wustl.edu	37	4	10446304	10446304	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC149	91050	genome.wustl.edu	37	4	24854703	24854703	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D19	55296	genome.wustl.edu	37	4	26741511	26741511	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM156	80008	genome.wustl.edu	37	4	39033893	39033893	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RFC1	5981	genome.wustl.edu	37	4	39314481	39314481	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC344967	344967	genome.wustl.edu	37	4	40044940	40044940	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
N4BP2	55728	genome.wustl.edu	37	4	40122672	40122672	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHIC2	26511	genome.wustl.edu	37	4	54880228	54880228	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC7	4589	genome.wustl.edu	37	4	71346834	71346834	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A4	8671	genome.wustl.edu	37	4	72363261	72363261	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD17	26057	genome.wustl.edu	37	4	73963911	73963911	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC345258	345258	genome.wustl.edu	37	4	83196640	83196640	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC10A6	345274	genome.wustl.edu	37	4	87744922	87744922	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSD17B11	51170	genome.wustl.edu	37	4	88261690	88261690	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSPP	1834	genome.wustl.edu	37	4	88534435	88534435	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC5	51191	genome.wustl.edu	37	4	89400504	89400504	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9B1	150159	genome.wustl.edu	37	4	103806392	103806392	+	Nonstop_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPNT	255743	genome.wustl.edu	37	4	106863559	106863559	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMK2D	817	genome.wustl.edu	37	4	114452441	114452441	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGT8	7368	genome.wustl.edu	37	4	115586883	115586883	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDM5	11107	genome.wustl.edu	37	4	121631520	121631520	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1109	84162	genome.wustl.edu	37	4	123130473	123130473	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT4	79633	genome.wustl.edu	37	4	126367493	126367493	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LARP1B	55132	genome.wustl.edu	37	4	129120621	129120621	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INPP4B	8821	genome.wustl.edu	37	4	143159161	143159161	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP38	84640	genome.wustl.edu	37	4	144106734	144106734	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR2	7097	genome.wustl.edu	37	4	154626227	154626227	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288073	100288073	genome.wustl.edu	37	4	165109716	165109716	+	RNA	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GK3P	2713	genome.wustl.edu	37	4	166199931	166199931	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEK1	4750	genome.wustl.edu	37	4	170477248	170477248	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALNT7	51809	genome.wustl.edu	37	4	174216618	174216618	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMGB2	3148	genome.wustl.edu	37	4	174253970	174253970	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWC2	80014	genome.wustl.edu	37	4	184166570	184166570	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC111	201973	genome.wustl.edu	37	4	185593611	185593611	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC110	256309	genome.wustl.edu	37	4	186379466	186379466	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNND2	1501	genome.wustl.edu	37	5	10981912	10981912	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH5	1767	genome.wustl.edu	37	5	13751251	13751251	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM105B	90268	genome.wustl.edu	37	5	14678860	14678860	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH12	1010	genome.wustl.edu	37	5	21765206	21765206	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DROSHA	29102	genome.wustl.edu	37	5	31511249	31511249	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFR	51663	genome.wustl.edu	37	5	32415108	32415108	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL7R	3575	genome.wustl.edu	37	5	35874557	35874557	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC1A3	6507	genome.wustl.edu	37	5	36629691	36629691	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPBL	25836	genome.wustl.edu	37	5	37022456	37022456	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf42	65250	genome.wustl.edu	37	5	37157443	37157443	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR70	55100	genome.wustl.edu	37	5	37480045	37480045	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTGER4	5734	genome.wustl.edu	37	5	40681099	40681099	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6	729	genome.wustl.edu	37	5	41176786	41176786	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMGCS1	3157	genome.wustl.edu	37	5	43299013	43299013	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCN1	348980	genome.wustl.edu	37	5	45303860	45303860	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEPDC1B	55789	genome.wustl.edu	37	5	59982913	59982913	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf44	80006	genome.wustl.edu	37	5	64960104	64960104	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCNB1	891	genome.wustl.edu	37	5	68463091	68463091	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP1B	4131	genome.wustl.edu	37	5	71490799	71490799	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP1B	4131	genome.wustl.edu	37	5	71495599	71495599	+	Silent	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM171	134285	genome.wustl.edu	37	5	72419385	72419385	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLK	51426	genome.wustl.edu	37	5	74865169	74865169	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F2RL1	2150	genome.wustl.edu	37	5	76128808	76128808	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CMYA5	202333	genome.wustl.edu	37	5	79034841	79034841	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VCAN	1462	genome.wustl.edu	37	5	82816028	82816028	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR98	84059	genome.wustl.edu	37	5	89910697	89910697	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR98	84059	genome.wustl.edu	37	5	89989993	89989993	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAM	5066	genome.wustl.edu	37	5	102360942	102360942	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM36	55521	genome.wustl.edu	37	5	114482917	114482917	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMXL1	1657	genome.wustl.edu	37	5	118465057	118465057	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSD17B4	3295	genome.wustl.edu	37	5	118844941	118844941	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FTMT	94033	genome.wustl.edu	37	5	121187902	121187902	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP120	153241	genome.wustl.edu	37	5	122722238	122722238	+	Silent	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF608	57507	genome.wustl.edu	37	5	123983453	123983453	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC27A6	28965	genome.wustl.edu	37	5	128351628	128351628	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS19	171019	genome.wustl.edu	37	5	128796104	128796104	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS19	171019	genome.wustl.edu	37	5	129037265	129037265	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CATSPER3	347732	genome.wustl.edu	37	5	134345169	134345169	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXCL14	9547	genome.wustl.edu	37	5	134914147	134914147	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXL21	26223	genome.wustl.edu	37	5	135272639	135272639	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPOCK1	6695	genome.wustl.edu	37	5	136448186	136448186	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM3B	51780	genome.wustl.edu	37	5	137715346	137715346	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	genome.wustl.edu	37	5	139917700	139917700	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA5	56143	genome.wustl.edu	37	5	140202909	140202909	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB3	56132	genome.wustl.edu	37	5	140480750	140480750	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB6	56130	genome.wustl.edu	37	5	140531474	140531474	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB3	56102	genome.wustl.edu	37	5	140751822	140751822	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB4	8641	genome.wustl.edu	37	5	140768701	140768701	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB6	56100	genome.wustl.edu	37	5	140788482	140788482	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0141	9812	genome.wustl.edu	37	5	141313951	141313951	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LARS	51520	genome.wustl.edu	37	5	145523018	145523018	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GM2A	2760	genome.wustl.edu	37	5	150646364	150646364	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOX30	11063	genome.wustl.edu	37	5	157053644	157053644	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCNJL	79616	genome.wustl.edu	37	5	159686623	159686623	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWC1	23286	genome.wustl.edu	37	5	167798537	167798537	+	Silent	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251133	0	genome.wustl.edu	37	5	175716537	175716537	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDHR2	54825	genome.wustl.edu	37	5	176016058	176016058	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM7	81786	genome.wustl.edu	37	5	180622642	180622642	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXF2	2295	genome.wustl.edu	37	6	1390647	1390647	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF4B	8899	genome.wustl.edu	37	6	4044125	4044125	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSP	1832	genome.wustl.edu	37	6	7580793	7580793	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM1B	221656	genome.wustl.edu	37	6	18218066	18218066	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDP2	51567	genome.wustl.edu	37	6	24653222	24653222	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCGN	10590	genome.wustl.edu	37	6	25701506	25701506	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H3A	8350	genome.wustl.edu	37	6	26020786	26020786	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2BD	3017	genome.wustl.edu	37	6	26158488	26158488	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R10	5514	genome.wustl.edu	37	6	30573698	30573698	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDC1	9656	genome.wustl.edu	37	6	30681012	30681012	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLIC1	1192	genome.wustl.edu	37	6	31701662	31701662	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNXB	7148	genome.wustl.edu	37	6	32041612	32041612	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF6B	1388	genome.wustl.edu	37	6	32088819	32088819	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMB8	5696	genome.wustl.edu	37	6	32809342	32809342	+	Silent	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAK1	578	genome.wustl.edu	37	6	33541922	33541922	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPR3	3710	genome.wustl.edu	37	6	33632745	33632745	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf81	221481	genome.wustl.edu	37	6	35705886	35705886	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCTD20	222658	genome.wustl.edu	37	6	36447385	36447385	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRSF3	6428	genome.wustl.edu	37	6	36564615	36564615	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDGA1	266727	genome.wustl.edu	37	6	37622143	37622143	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRFN2	57497	genome.wustl.edu	37	6	40399738	40399738	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRFN2	57497	genome.wustl.edu	37	6	40400695	40400695	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TREML2	79865	genome.wustl.edu	37	6	41162226	41162226	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TREML4	285852	genome.wustl.edu	37	6	41197370	41197370	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLC4	89953	genome.wustl.edu	37	6	43034747	43034747	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLH	5429	genome.wustl.edu	37	6	43550150	43550150	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUNX2	860	genome.wustl.edu	37	6	45459774	45459774	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUT	4594	genome.wustl.edu	37	6	49419255	49419255	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKHD1	5314	genome.wustl.edu	37	6	51613268	51613268	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKHD1	5314	genome.wustl.edu	37	6	51732848	51732848	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCRTR2	3062	genome.wustl.edu	37	6	55128525	55128525	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX43	55510	genome.wustl.edu	37	6	74116158	74116158	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTK	7272	genome.wustl.edu	37	6	80732089	80732089	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTK	7272	genome.wustl.edu	37	6	80751905	80751905	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IBTK	25998	genome.wustl.edu	37	6	82904194	82904194	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP8AP2	9994	genome.wustl.edu	37	6	90576764	90576764	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL32	114792	genome.wustl.edu	37	6	97562121	97562121	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP45	85015	genome.wustl.edu	37	6	99914615	99914615	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKD1	221264	genome.wustl.edu	37	6	109850251	109850251	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKAIN2	154215	genome.wustl.edu	37	6	124604204	124604204	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
L3MBTL3	84456	genome.wustl.edu	37	6	130442079	130442079	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTGF	1490	genome.wustl.edu	37	6	132271177	132271177	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VNN1	8876	genome.wustl.edu	37	6	133014259	133014259	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VNN2	8875	genome.wustl.edu	37	6	133065598	133065598	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf192	116843	genome.wustl.edu	37	6	133092030	133092030	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXO30	84085	genome.wustl.edu	37	6	146125969	146125969	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM1	2911	genome.wustl.edu	37	6	146755413	146755413	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KATNA1	11104	genome.wustl.edu	37	6	149916232	149916232	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KATNA1	11104	genome.wustl.edu	37	6	149919454	149919454	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP11	84918	genome.wustl.edu	37	6	150164193	150164193	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP12	9590	genome.wustl.edu	37	6	151672475	151672475	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNE1	23345	genome.wustl.edu	37	6	152589256	152589256	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLG	5340	genome.wustl.edu	37	6	161155027	161155027	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS6KA2	6196	genome.wustl.edu	37	6	166904175	166904175	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL2	83887	genome.wustl.edu	37	6	167754346	167754346	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARD11	84433	genome.wustl.edu	37	7	2983932	2983932	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTB	60	genome.wustl.edu	37	7	5568298	5568298	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C7orf28B	221960	genome.wustl.edu	37	7	6854430	6854430	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL7	55975	genome.wustl.edu	37	7	23164783	23164783	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPP6	51678	genome.wustl.edu	37	7	24727082	24727082	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI3	2737	genome.wustl.edu	37	7	42088271	42088271	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYW1B	441250	genome.wustl.edu	37	7	72297563	72297563	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF2I	2969	genome.wustl.edu	37	7	74105436	74105436	+	Silent	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHTF2	57157	genome.wustl.edu	37	7	77531192	77531192	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCLO	27445	genome.wustl.edu	37	7	82430854	82430854	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP9	10142	genome.wustl.edu	37	7	91625067	91625067	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LMTK2	22853	genome.wustl.edu	37	7	97822474	97822474	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM130	222865	genome.wustl.edu	37	7	98460814	98460814	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRRAP	8295	genome.wustl.edu	37	7	98609005	98609005	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2AE1	81392	genome.wustl.edu	37	7	99474116	99474116	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXO24	26261	genome.wustl.edu	37	7	100187982	100187982	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRRT	51593	genome.wustl.edu	37	7	100485886	100485886	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC17	140453	genome.wustl.edu	37	7	100682084	100682084	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC17	10234	genome.wustl.edu	37	7	102579934	102579934	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PMPCB	9512	genome.wustl.edu	37	7	102952581	102952581	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC26A5	375611	genome.wustl.edu	37	7	103061828	103061828	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL5	55904	genome.wustl.edu	37	7	104717611	104717611	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HBP1	26959	genome.wustl.edu	37	7	106827090	106827090	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METTL2B	55798	genome.wustl.edu	37	7	128128475	128128475	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNA4	91584	genome.wustl.edu	37	7	131866877	131866877	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR91	29062	genome.wustl.edu	37	7	134871760	134871760	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1549	57670	genome.wustl.edu	37	7	138591663	138591663	+	Splice_Site	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCK2	90956	genome.wustl.edu	37	7	140373833	140373833	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSTK1	373156	genome.wustl.edu	37	7	142962103	142962103	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA1	2041	genome.wustl.edu	37	7	143095907	143095907	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDIA4	9601	genome.wustl.edu	37	7	148701212	148701212	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF862	643641	genome.wustl.edu	37	7	149545505	149545505	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERICH1	157697	genome.wustl.edu	37	8	623979	623979	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLGAP2	9228	genome.wustl.edu	37	8	1497554	1497554	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LONRF1	91694	genome.wustl.edu	37	8	12586561	12586561	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LONRF1	91694	genome.wustl.edu	37	8	12592793	12592793	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCM1	5108	genome.wustl.edu	37	8	17883071	17883071	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAT1	9	genome.wustl.edu	37	8	18080344	18080344	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSD3	23362	genome.wustl.edu	37	8	18393309	18393309	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIWIL2	55124	genome.wustl.edu	37	8	22140607	22140607	+	Silent	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC39A14	23516	genome.wustl.edu	37	8	22273407	22273407	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK5	80005	genome.wustl.edu	37	8	25161825	25161825	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK5	80005	genome.wustl.edu	37	8	25183061	25183061	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF13B	23303	genome.wustl.edu	37	8	29023177	29023177	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAK16	84549	genome.wustl.edu	37	8	33354213	33354213	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDHD2	23259	genome.wustl.edu	37	8	38090631	38090631	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDHD2	23259	genome.wustl.edu	37	8	38091919	38091919	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAM2	2515	genome.wustl.edu	37	8	39607213	39607213	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANK1	286	genome.wustl.edu	37	8	41530248	41530248	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNTA	2339	genome.wustl.edu	37	8	42932469	42932469	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKDC	5591	genome.wustl.edu	37	8	48716000	48716000	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKDC	5591	genome.wustl.edu	37	8	48848923	48848923	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM110B	90362	genome.wustl.edu	37	8	59059421	59059421	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM55	84675	genome.wustl.edu	37	8	67066340	67066340	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADHFE1	137872	genome.wustl.edu	37	8	67355031	67355031	+	Splice_Site	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSPP1	79848	genome.wustl.edu	37	8	68084681	68084681	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PREX2	80243	genome.wustl.edu	37	8	69136797	69136797	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLCO5A1	81796	genome.wustl.edu	37	8	70617428	70617428	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCOA2	10499	genome.wustl.edu	37	8	71069130	71069130	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DECR1	1666	genome.wustl.edu	37	8	91049094	91049094	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM67	91147	genome.wustl.edu	37	8	94816991	94816991	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAPTM4B	55353	genome.wustl.edu	37	8	98837316	98837316	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS13B	157680	genome.wustl.edu	37	8	100133663	100133663	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLF10	7071	genome.wustl.edu	37	8	103664539	103664539	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMS2	9699	genome.wustl.edu	37	8	104934056	104934056	+	Nonstop_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP12	29967	genome.wustl.edu	37	8	105509287	105509287	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC35	9694	genome.wustl.edu	37	8	109462075	109462075	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP11B2	1585	genome.wustl.edu	37	8	143994248	143994248	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF623	9831	genome.wustl.edu	37	8	144732948	144732948	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOCK8	81704	genome.wustl.edu	37	9	463594	463594	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KANK1	23189	genome.wustl.edu	37	9	738488	738488	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RCL1	10171	genome.wustl.edu	37	9	4827086	4827086	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLDC	2731	genome.wustl.edu	37	9	6588416	6588416	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLDC	2731	genome.wustl.edu	37	9	6589220	6589220	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFIB	4781	genome.wustl.edu	37	9	14307296	14307296	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLLT3	4300	genome.wustl.edu	37	9	20413907	20413907	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf72	203228	genome.wustl.edu	37	9	27562388	27562388	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF24	347240	genome.wustl.edu	37	9	34257619	34257619	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAI1	27019	genome.wustl.edu	37	9	34506854	34506854	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf23	138716	genome.wustl.edu	37	9	34610991	34610991	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC107	203260	genome.wustl.edu	37	9	35661109	35661109	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HINT2	84681	genome.wustl.edu	37	9	35813291	35813291	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM8B	51754	genome.wustl.edu	37	9	35852855	35852855	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD1	22844	genome.wustl.edu	37	9	37740591	37740591	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPM3	80036	genome.wustl.edu	37	9	73218282	73218282	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM2	23670	genome.wustl.edu	37	9	74345683	74345683	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289618	100289618	genome.wustl.edu	37	9	78943120	78943120	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNRNPK	3190	genome.wustl.edu	37	9	86586623	86586623	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BICD2	23299	genome.wustl.edu	37	9	95482775	95482775	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BICD2	23299	genome.wustl.edu	37	9	95491422	95491422	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000249385	0	genome.wustl.edu	37	9	99883861	99883861	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL15A1	1306	genome.wustl.edu	37	9	101818586	101818586	+	Silent	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INVS	27130	genome.wustl.edu	37	9	103054846	103054846	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX10	54881	genome.wustl.edu	37	9	103102648	103102648	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112778274	112778274	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SVEP1	79987	genome.wustl.edu	37	9	113276339	113276339	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPPA-AS1	493913	genome.wustl.edu	37	9	119159079	119159079	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM32	22954	genome.wustl.edu	37	9	119460539	119460539	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEGF9	1955	genome.wustl.edu	37	9	123367661	123367661	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM18	92400	genome.wustl.edu	37	9	125004184	125004184	+	Silent	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OLFML2A	169611	genome.wustl.edu	37	9	127572306	127572306	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM129B	64855	genome.wustl.edu	37	9	130270705	130270705	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FPGS	2356	genome.wustl.edu	37	9	130566616	130566616	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A25	114789	genome.wustl.edu	37	9	130854248	130854248	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LCN2	3934	genome.wustl.edu	37	9	130914298	130914298	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CIZ1	25792	genome.wustl.edu	37	9	130941458	130941458	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf114	51490	genome.wustl.edu	37	9	131588858	131588858	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP188	23511	genome.wustl.edu	37	9	131721314	131721314	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMC3	10319	genome.wustl.edu	37	9	133927971	133927971	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP214	8021	genome.wustl.edu	37	9	134008542	134008542	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRC2B	84726	genome.wustl.edu	37	9	134349932	134349932	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABO	28	genome.wustl.edu	37	9	136131178	136131178	+	Silent	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SURF6	6838	genome.wustl.edu	37	9	136199054	136199054	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SURF4	6836	genome.wustl.edu	37	9	136233513	136233513	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL5A1	1289	genome.wustl.edu	37	9	137716639	137716639	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QSOX2	169714	genome.wustl.edu	37	9	139100671	139100671	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANAPC2	29882	genome.wustl.edu	37	9	140082343	140082343	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COBRA1	25920	genome.wustl.edu	37	9	140157534	140157534	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIP2C	22982	genome.wustl.edu	37	10	409225	409225	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFKP	5214	genome.wustl.edu	37	10	3175485	3175485	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PITRM1	10531	genome.wustl.edu	37	10	3193389	3193389	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKR1C4	1109	genome.wustl.edu	37	10	5247791	5247791	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf18	54906	genome.wustl.edu	37	10	5782232	5782232	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEPHS1	22929	genome.wustl.edu	37	10	13380706	13380706	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUV39H2	79723	genome.wustl.edu	37	10	14939270	14939270	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCLRE1C	64421	genome.wustl.edu	37	10	14950785	14950785	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUBN	8029	genome.wustl.edu	37	10	16982148	16982148	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRC1	4360	genome.wustl.edu	37	10	18169520	18169520	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO3A	53904	genome.wustl.edu	37	10	26482209	26482209	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZEB1	6935	genome.wustl.edu	37	10	31809531	31809531	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF485	220992	genome.wustl.edu	37	10	44112215	44112215	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM21C	253725	genome.wustl.edu	37	10	46224343	46224343	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM35B2	439965	genome.wustl.edu	37	10	47386532	47386532	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAH2C	653365	genome.wustl.edu	37	10	48020456	48020456	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP22	58504	genome.wustl.edu	37	10	49662140	49662140	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DRGX	644168	genome.wustl.edu	37	10	50574403	50574403	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63816977	63816977	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63852568	63852568	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNA2	1763	genome.wustl.edu	37	10	70191980	70191980	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUPV3L1	6832	genome.wustl.edu	37	10	70967668	70967668	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL13A1	1305	genome.wustl.edu	37	10	71631946	71631946	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUDT13	25961	genome.wustl.edu	37	10	74883974	74883974	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC18	118491	genome.wustl.edu	37	10	75016132	75016132	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0913	23053	genome.wustl.edu	37	10	75559800	75559800	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VCL	7414	genome.wustl.edu	37	10	75867085	75867085	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM22E	283008	genome.wustl.edu	37	10	81601820	81601820	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692924	89692924	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAMBPL1	57559	genome.wustl.edu	37	10	90670745	90670745	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTAF1	9044	genome.wustl.edu	37	10	93768698	93768698	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPEB3	22849	genome.wustl.edu	37	10	93904752	93904752	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP55	55165	genome.wustl.edu	37	10	95275264	95275264	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRA10AC1	118924	genome.wustl.edu	37	10	95445053	95445053	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35G1	159371	genome.wustl.edu	37	10	95660822	95660822	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CC2D2B	387707	genome.wustl.edu	37	10	97769594	97769594	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRP12	23223	genome.wustl.edu	37	10	99126586	99126586	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A28	81894	genome.wustl.edu	37	10	101371088	101371088	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNIP2	30819	genome.wustl.edu	37	10	103588951	103588951	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBF1	8729	genome.wustl.edu	37	10	104130185	104130185	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNNM2	54805	genome.wustl.edu	37	10	104809546	104809546	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF5	6877	genome.wustl.edu	37	10	105138180	105138180	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDCD11	22984	genome.wustl.edu	37	10	105178304	105178304	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORCS3	22986	genome.wustl.edu	37	10	106918700	106918700	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HABP2	3026	genome.wustl.edu	37	10	115343075	115343075	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCMBP	79892	genome.wustl.edu	37	10	121612564	121612564	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC23IP	11196	genome.wustl.edu	37	10	121689254	121689254	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHA1	59338	genome.wustl.edu	37	10	124183737	124183737	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTRA1	5654	genome.wustl.edu	37	10	124266907	124266907	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPXM2	119587	genome.wustl.edu	37	10	125528198	125528198	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OAT	4942	genome.wustl.edu	37	10	126089550	126089550	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MKI67	4288	genome.wustl.edu	37	10	129910495	129910495	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCERG1L	256536	genome.wustl.edu	37	10	132944845	132944845	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL23	6150	genome.wustl.edu	37	11	1973408	1973408	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARS	833	genome.wustl.edu	37	11	3039851	3039851	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF195	7748	genome.wustl.edu	37	11	3381419	3381419	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC650368	650368	genome.wustl.edu	37	11	3427760	3427760	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP98	4928	genome.wustl.edu	37	11	3722065	3722065	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51E1	143503	genome.wustl.edu	37	11	4673933	4673933	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OOSP1	255649	genome.wustl.edu	37	11	5443872	5443872	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBQLN3	50613	genome.wustl.edu	37	11	5530048	5530048	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM5	85363	genome.wustl.edu	37	11	5701023	5701023	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMPD1	6609	genome.wustl.edu	37	11	6413367	6413367	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNHD1	144132	genome.wustl.edu	37	11	6592966	6592966	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTR9	9646	genome.wustl.edu	37	11	10789383	10789383	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COPB1	1315	genome.wustl.edu	37	11	14512117	14512117	+	Silent	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH1C	10083	genome.wustl.edu	37	11	17519711	17519711	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTY2D1	144108	genome.wustl.edu	37	11	18637275	18637275	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEPDC7	91614	genome.wustl.edu	37	11	33050322	33050322	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIPK3	10114	genome.wustl.edu	37	11	33375017	33375017	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC17	55761	genome.wustl.edu	37	11	43471655	43471655	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF21A	51317	genome.wustl.edu	37	11	45959706	45959706	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMBRA1	55626	genome.wustl.edu	37	11	46569395	46569395	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYBPC3	4607	genome.wustl.edu	37	11	47353701	47353701	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNKS1BP1	85456	genome.wustl.edu	37	11	57069378	57069378	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6Q1	219952	genome.wustl.edu	37	11	57799376	57799376	+	Nonstop_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000214793	0	genome.wustl.edu	37	11	59666224	59666224	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MS4A15	219995	genome.wustl.edu	37	11	60538770	60538770	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TUT1	64852	genome.wustl.edu	37	11	62343616	62343616	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A11	55867	genome.wustl.edu	37	11	64329573	64329573	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYGM	5837	genome.wustl.edu	37	11	64518837	64518837	+	Silent	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MALAT1	378938	genome.wustl.edu	37	11	65265678	65265678	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MALAT1	378938	genome.wustl.edu	37	11	65273581	65273581	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FIBP	9158	genome.wustl.edu	37	11	65653893	65653893	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC87	55231	genome.wustl.edu	37	11	66359219	66359219	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM4	5936	genome.wustl.edu	37	11	66411237	66411237	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT12	91683	genome.wustl.edu	37	11	66811216	66811216	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM2A	22992	genome.wustl.edu	37	11	66888815	66888815	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTL5	9633	genome.wustl.edu	37	11	68512544	68512544	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHANK2	22941	genome.wustl.edu	37	11	70348915	70348915	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF121	55298	genome.wustl.edu	37	11	71707391	71707391	+	RNA	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS4	92105	genome.wustl.edu	37	11	77605371	77605371	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAB2	9846	genome.wustl.edu	37	11	77961371	77961371	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf82	220042	genome.wustl.edu	37	11	82644892	82644892	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT3	120114	genome.wustl.edu	37	11	92088323	92088323	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT3	120114	genome.wustl.edu	37	11	92525978	92525978	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT3	120114	genome.wustl.edu	37	11	92570870	92570870	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEPHL1	341208	genome.wustl.edu	37	11	93844211	93844211	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMOTL1	154810	genome.wustl.edu	37	11	94533021	94533021	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXPH5	23086	genome.wustl.edu	37	11	108383032	108383032	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALG9	79796	genome.wustl.edu	37	11	111739350	111739350	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCL9L	283149	genome.wustl.edu	37	11	118772137	118772137	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP2	9099	genome.wustl.edu	37	11	119228903	119228903	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECTA	7007	genome.wustl.edu	37	11	120998618	120998618	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8D1	283159	genome.wustl.edu	37	11	124180164	124180164	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ETS1	2113	genome.wustl.edu	37	11	128355972	128355972	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFRKB	4798	genome.wustl.edu	37	11	129744220	129744220	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF9B	22997	genome.wustl.edu	37	11	133801986	133801986	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM5A	5927	genome.wustl.edu	37	12	443422	443422	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNK1	65125	genome.wustl.edu	37	12	988777	988777	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERC1	23085	genome.wustl.edu	37	12	1289737	1289737	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA5	3741	genome.wustl.edu	37	12	5154614	5154614	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VWF	7450	genome.wustl.edu	37	12	6134844	6134844	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCNN1A	6337	genome.wustl.edu	37	12	6483859	6483859	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCAPD2	9918	genome.wustl.edu	37	12	6626837	6626837	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCAPD2	9918	genome.wustl.edu	37	12	6631046	6631046	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC4C	170482	genome.wustl.edu	37	12	7882333	7882333	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
A2ML1	144568	genome.wustl.edu	37	12	9020884	9020884	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAS2R13	50838	genome.wustl.edu	37	12	11061547	11061547	+	Silent	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAS2R50	259296	genome.wustl.edu	37	12	11138711	11138711	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CREBL2	1389	genome.wustl.edu	37	12	12790643	12790643	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPRC5A	9052	genome.wustl.edu	37	12	13065468	13065468	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WBP11	51729	genome.wustl.edu	37	12	14952594	14952594	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRO	5800	genome.wustl.edu	37	12	15718556	15718556	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYROXD1	79912	genome.wustl.edu	37	12	21614991	21614991	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALG10	84920	genome.wustl.edu	37	12	34179762	34179762	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPNE8	144402	genome.wustl.edu	37	12	39170084	39170084	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL2	8085	genome.wustl.edu	37	12	49448123	49448123	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RACGAP1	29127	genome.wustl.edu	37	12	50386094	50386094	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIP2B	57609	genome.wustl.edu	37	12	51112790	51112790	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC11A2	4891	genome.wustl.edu	37	12	51402294	51402294	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACVR1B	91	genome.wustl.edu	37	12	52369209	52369209	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NR4A1	3164	genome.wustl.edu	37	12	52451230	52451230	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TENC1	23371	genome.wustl.edu	37	12	53453883	53453883	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K12	7786	genome.wustl.edu	37	12	53880838	53880838	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOXC5	3222	genome.wustl.edu	37	12	54428226	54428226	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6C65	403282	genome.wustl.edu	37	12	55794442	55794442	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKA	1606	genome.wustl.edu	37	12	56346620	56346620	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKA	1606	genome.wustl.edu	37	12	56346661	56346661	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYL6B	140465	genome.wustl.edu	37	12	56547758	56547758	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCC2	6601	genome.wustl.edu	37	12	56581036	56581036	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAZ2A	11176	genome.wustl.edu	37	12	56996500	56996500	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB39	9880	genome.wustl.edu	37	12	57398602	57398602	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57594545	57594545	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD6	114785	genome.wustl.edu	37	12	57920493	57920493	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF5A	3798	genome.wustl.edu	37	12	57960915	57960915	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XPOT	11260	genome.wustl.edu	37	12	64825368	64825368	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HELB	92797	genome.wustl.edu	37	12	66717976	66717976	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIP1	23426	genome.wustl.edu	37	12	66786573	66786573	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFC3H1	196441	genome.wustl.edu	37	12	72057183	72057183	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNC2	3747	genome.wustl.edu	37	12	75444965	75444965	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100127919	100127919	genome.wustl.edu	37	12	93429389	93429389	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf63	374467	genome.wustl.edu	37	12	97114258	97114258	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APAF1	317	genome.wustl.edu	37	12	99080653	99080653	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf48	55010	genome.wustl.edu	37	12	102589916	102589916	+	Silent	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAB2	55576	genome.wustl.edu	37	12	104149440	104149440	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCFC2	29915	genome.wustl.edu	37	12	104460053	104460053	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALDH1L2	160428	genome.wustl.edu	37	12	105462659	105462659	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRY1	1407	genome.wustl.edu	37	12	107398920	107398920	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACACB	32	genome.wustl.edu	37	12	109623531	109623531	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACACB	32	genome.wustl.edu	37	12	109684008	109684008	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf51	283450	genome.wustl.edu	37	12	112610511	112610511	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf51	283450	genome.wustl.edu	37	12	112668575	112668575	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSPB8	26353	genome.wustl.edu	37	12	119631534	119631534	+	Silent	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLXIP	22877	genome.wustl.edu	37	12	122625595	122625595	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KNTC1	9735	genome.wustl.edu	37	12	123062326	123062326	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPHOSPH9	10198	genome.wustl.edu	37	12	123647628	123647628	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf65	91574	genome.wustl.edu	37	12	123741574	123741574	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK2AP1	8099	genome.wustl.edu	37	12	123751745	123751745	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBNO1	55206	genome.wustl.edu	37	12	123804544	123804544	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH10	196385	genome.wustl.edu	37	12	124401041	124401041	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBC	7316	genome.wustl.edu	37	12	125397699	125397699	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMBP2	23504	genome.wustl.edu	37	12	130935764	130935764	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EP400	57634	genome.wustl.edu	37	12	132472311	132472311	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLE	5426	genome.wustl.edu	37	12	133214612	133214612	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSPC1	55269	genome.wustl.edu	37	13	20346594	20346594	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLT3	2322	genome.wustl.edu	37	13	28609677	28609677	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRY	10129	genome.wustl.edu	37	13	32745401	32745401	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPG20	23111	genome.wustl.edu	37	13	36903584	36903584	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROSER1	80209	genome.wustl.edu	37	13	39587642	39587642	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COG6	57511	genome.wustl.edu	37	13	40293483	40293483	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCTD4	386618	genome.wustl.edu	37	13	45767958	45767958	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRCH1	23143	genome.wustl.edu	37	13	47224449	47224449	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	49039185	49039185	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDADC1	81602	genome.wustl.edu	37	13	49829998	49829998	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THSD1	55901	genome.wustl.edu	37	13	52952406	52952406	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDRD3	81550	genome.wustl.edu	37	13	61102733	61102733	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BORA	79866	genome.wustl.edu	37	13	73319140	73319140	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC15A1	6564	genome.wustl.edu	37	13	99338468	99338468	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASA3	22821	genome.wustl.edu	37	13	114792890	114792890	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPF3A	65110	genome.wustl.edu	37	13	115067486	115067486	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNASE10	338879	genome.wustl.edu	37	14	20978883	20978883	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288791	100288791	genome.wustl.edu	37	14	23311228	23311228	+	Nonsense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMB11	122706	genome.wustl.edu	37	14	23512120	23512120	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TINF2	26277	genome.wustl.edu	37	14	24710454	24710454	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAZ1A	11177	genome.wustl.edu	37	14	35243689	35243689	+	Silent	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNN	5411	genome.wustl.edu	37	14	39646669	39646669	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAAF2	55172	genome.wustl.edu	37	14	50092545	50092545	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIN	51199	genome.wustl.edu	37	14	51226993	51226993	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOCS4	122809	genome.wustl.edu	37	14	55510863	55510863	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOJ	57381	genome.wustl.edu	37	14	63757668	63757668	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNE2	23224	genome.wustl.edu	37	14	64589028	64589028	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNE2	23224	genome.wustl.edu	37	14	64619362	64619362	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS6	9628	genome.wustl.edu	37	14	72985221	72985221	+	Silent	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C14orf45	80127	genome.wustl.edu	37	14	74531394	74531394	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLH3	27030	genome.wustl.edu	37	14	75506669	75506669	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEL1L	6400	genome.wustl.edu	37	14	81953766	81953766	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR65	8477	genome.wustl.edu	37	14	88478157	88478157	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNK10	54207	genome.wustl.edu	37	14	88652421	88652421	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EML5	161436	genome.wustl.edu	37	14	89083107	89083107	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB42P1	646996	genome.wustl.edu	37	14	90358634	90358634	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIP11	9321	genome.wustl.edu	37	14	92470420	92470420	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPK1	3705	genome.wustl.edu	37	14	93542959	93542959	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC79	57578	genome.wustl.edu	37	14	94046553	94046553	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFI27L2	83982	genome.wustl.edu	37	14	94594300	94594300	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINA4	5267	genome.wustl.edu	37	14	95034557	95034557	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DICER1	23405	genome.wustl.edu	37	14	95579533	95579533	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCNK	8812	genome.wustl.edu	37	14	99973448	99973448	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EML1	2009	genome.wustl.edu	37	14	100405650	100405650	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DEGS2	123099	genome.wustl.edu	37	14	100615443	100615443	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1H1	1778	genome.wustl.edu	37	14	102452685	102452685	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAGE	0	genome.wustl.edu	37	14	102718287	102718287	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF839	55778	genome.wustl.edu	37	14	102807772	102807772	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFAIP2	7127	genome.wustl.edu	37	14	103601627	103601627	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDRD9	122402	genome.wustl.edu	37	14	104481084	104481084	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDRD9	122402	genome.wustl.edu	37	14	104493207	104493207	+	Silent	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK2	113146	genome.wustl.edu	37	14	105410843	105410843	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTBD6	90135	genome.wustl.edu	37	14	105716288	105716288	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXADRP2	646243	genome.wustl.edu	37	15	22016844	22016844	+	RNA	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNORD115-17	100033455	genome.wustl.edu	37	15	25446515	25446515	+	RNA	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OCA2	4948	genome.wustl.edu	37	15	28273188	28273188	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR3	6263	genome.wustl.edu	37	15	34153353	34153353	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000215042	0	genome.wustl.edu	37	15	34782498	34782498	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEIS2	4212	genome.wustl.edu	37	15	37385801	37385801	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMCO5A	145942	genome.wustl.edu	37	15	38243323	38243323	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAHD1	22893	genome.wustl.edu	37	15	40751549	40751549	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST14	113189	genome.wustl.edu	37	15	40764199	40764199	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASC5	57082	genome.wustl.edu	37	15	40911208	40911208	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CATSPER2P1	440278	genome.wustl.edu	37	15	44028177	44028177	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC13C	440279	genome.wustl.edu	37	15	54307372	54307372	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RORA	6095	genome.wustl.edu	37	15	60806817	60806817	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LACTB	114294	genome.wustl.edu	37	15	63433623	63433623	+	Silent	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CA12	771	genome.wustl.edu	37	15	63632938	63632938	+	Silent	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP3	9960	genome.wustl.edu	37	15	63866345	63866345	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGDCC3	9543	genome.wustl.edu	37	15	65621360	65621360	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIS3L	115752	genome.wustl.edu	37	15	66618192	66618192	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARIH1	25820	genome.wustl.edu	37	15	72875619	72875619	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXO22	26263	genome.wustl.edu	37	15	76222412	76222412	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTSH	1512	genome.wustl.edu	37	15	79221825	79221825	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM154B	283726	genome.wustl.edu	37	15	82574757	82574757	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR73	84942	genome.wustl.edu	37	15	85186892	85186892	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC28A1	9154	genome.wustl.edu	37	15	85438239	85438239	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC28A1	9154	genome.wustl.edu	37	15	85448848	85448848	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC28A1	9154	genome.wustl.edu	37	15	85488017	85488017	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FANCI	55215	genome.wustl.edu	37	15	89844621	89844621	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHCG	51458	genome.wustl.edu	37	15	90021123	90021123	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF710	374655	genome.wustl.edu	37	15	90611786	90611786	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FURIN	5045	genome.wustl.edu	37	15	91420241	91420241	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYSMD4	145748	genome.wustl.edu	37	15	100269520	100269520	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS17	170691	genome.wustl.edu	37	15	100533337	100533337	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZG16B	124220	genome.wustl.edu	37	16	2882073	2882073	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CREBBP	1387	genome.wustl.edu	37	16	3786728	3786728	+	Nonsense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NMRAL1	57407	genome.wustl.edu	37	16	4511945	4511945	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMOX2	3163	genome.wustl.edu	37	16	4555578	4555578	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000221809	0	genome.wustl.edu	37	16	5313276	5313276	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBFOX1	54715	genome.wustl.edu	37	16	7102090	7102090	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBFOX1	54715	genome.wustl.edu	37	16	7647385	7647385	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNN	8303	genome.wustl.edu	37	16	11770106	11770106	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TXNDC11	51061	genome.wustl.edu	37	16	11781721	11781721	+	Silent	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC5	79838	genome.wustl.edu	37	16	19475197	19475197	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMC5	79838	genome.wustl.edu	37	16	19488819	19488819	+	Silent	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBBP6	5930	genome.wustl.edu	37	16	24573169	24573169	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBK1	388228	genome.wustl.edu	37	16	28330370	28330370	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAOK2	9344	genome.wustl.edu	37	16	29997696	29997696	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAOK2	9344	genome.wustl.edu	37	16	29997828	29997828	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOC2A	8448	genome.wustl.edu	37	16	30018158	30018158	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP4C	5531	genome.wustl.edu	37	16	30094805	30094805	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000250616	0	genome.wustl.edu	37	16	30116131	30116131	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBRS	64319	genome.wustl.edu	37	16	30680891	30680891	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STX1B	112755	genome.wustl.edu	37	16	31004724	31004724	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUS	2521	genome.wustl.edu	37	16	31195222	31195222	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYLK3	91807	genome.wustl.edu	37	16	46761284	46761284	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247487	0	genome.wustl.edu	37	16	48382261	48382261	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARL2BP	23568	genome.wustl.edu	37	16	57286138	57286138	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC3L1	283849	genome.wustl.edu	37	16	67220774	67220774	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EDC4	23644	genome.wustl.edu	37	16	67914624	67914624	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC12A4	6560	genome.wustl.edu	37	16	67982045	67982045	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMCO7	79613	genome.wustl.edu	37	16	68901069	68901069	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAS3	3038	genome.wustl.edu	37	16	69143689	69143689	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SF3B3	23450	genome.wustl.edu	37	16	70602200	70602200	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72993669	72993669	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWOX	51741	genome.wustl.edu	37	16	79245713	79245713	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CMIP	80790	genome.wustl.edu	37	16	81735398	81735398	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBTPS1	8720	genome.wustl.edu	37	16	84108231	84108231	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTHFSD	64779	genome.wustl.edu	37	16	86575317	86575317	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZCCHC14	23174	genome.wustl.edu	37	16	87446721	87446721	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHDC4	54758	genome.wustl.edu	37	16	87742009	87742009	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C16orf55	124045	genome.wustl.edu	37	16	89735763	89735763	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPA1	6117	genome.wustl.edu	37	17	1782921	1782921	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100292447	100292447	genome.wustl.edu	37	17	2221762	2221762	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METTL16	79066	genome.wustl.edu	37	17	2344825	2344825	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKFY1	51479	genome.wustl.edu	37	17	4098277	4098277	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP6	9098	genome.wustl.edu	37	17	5072305	5072305	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7578458	7578458	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD3	1107	genome.wustl.edu	37	17	7814976	7814976	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTROB	116840	genome.wustl.edu	37	17	7852725	7852725	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf59	54785	genome.wustl.edu	37	17	8092635	8092635	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFAS	5198	genome.wustl.edu	37	17	8158377	8158377	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDEL1	81565	genome.wustl.edu	37	17	8349146	8349146	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH10	4628	genome.wustl.edu	37	17	8395626	8395626	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R6	146850	genome.wustl.edu	37	17	8731493	8731493	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH4	4622	genome.wustl.edu	37	17	10348569	10348569	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH4	4622	genome.wustl.edu	37	17	10352035	10352035	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPV2	51393	genome.wustl.edu	37	17	16335418	16335418	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COPS3	8533	genome.wustl.edu	37	17	17165363	17165363	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf39	79018	genome.wustl.edu	37	17	17962207	17962207	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOP3A	7156	genome.wustl.edu	37	17	18206019	18206019	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ULK2	9706	genome.wustl.edu	37	17	19689302	19689302	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ULK2	9706	genome.wustl.edu	37	17	19700871	19700871	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM199	147007	genome.wustl.edu	37	17	26686380	26686380	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0100	9703	genome.wustl.edu	37	17	26961966	26961966	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0100	9703	genome.wustl.edu	37	17	26962602	26962602	+	Nonsense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0100	9703	genome.wustl.edu	37	17	26964176	26964176	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf63	55731	genome.wustl.edu	37	17	27086641	27086641	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLOT2	2319	genome.wustl.edu	37	17	27207792	27207792	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFCAB5	374786	genome.wustl.edu	37	17	28380790	28380790	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRLF3	51379	genome.wustl.edu	37	17	29119552	29119552	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLFN5	162394	genome.wustl.edu	37	17	33588006	33588006	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACACA	31	genome.wustl.edu	37	17	35616397	35616397	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TADA2A	6871	genome.wustl.edu	37	17	35825651	35825651	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC6	990	genome.wustl.edu	37	17	38457742	38457742	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCR7	1236	genome.wustl.edu	37	17	38711262	38711262	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP9-2	83899	genome.wustl.edu	37	17	39382914	39382914	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT9	3857	genome.wustl.edu	37	17	39726462	39726462	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT17	3872	genome.wustl.edu	37	17	39777034	39777034	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC25	83538	genome.wustl.edu	37	17	40117322	40117322	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KAT2A	2648	genome.wustl.edu	37	17	40266936	40266936	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAT3	6774	genome.wustl.edu	37	17	40500471	40500471	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BECN1	8678	genome.wustl.edu	37	17	40970645	40970645	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AARSD1	80755	genome.wustl.edu	37	17	41106908	41106908	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX8	1659	genome.wustl.edu	37	17	41585277	41585277	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPP2	4355	genome.wustl.edu	37	17	41957188	41957188	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFTUD2	9343	genome.wustl.edu	37	17	42953317	42953317	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SP6	80320	genome.wustl.edu	37	17	45924969	45924969	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSF5	124535	genome.wustl.edu	37	17	56557627	56557627	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HEATR6	63897	genome.wustl.edu	37	17	58147117	58147117	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FTSJ3	117246	genome.wustl.edu	37	17	61902073	61902073	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FADS6	283985	genome.wustl.edu	37	17	72878808	72878808	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GGA3	23163	genome.wustl.edu	37	17	73234436	73234436	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALK1	2584	genome.wustl.edu	37	17	73758856	73758856	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC13D	201294	genome.wustl.edu	37	17	73836863	73836863	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EVPL	2125	genome.wustl.edu	37	17	74003314	74003314	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC7	23265	genome.wustl.edu	37	17	74093947	74093947	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBE2O	63893	genome.wustl.edu	37	17	74395862	74395862	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH17	8632	genome.wustl.edu	37	17	76563079	76563079	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTG1	71	genome.wustl.edu	37	17	79478637	79478637	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HGS	9146	genome.wustl.edu	37	17	79663641	79663641	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEP192	55125	genome.wustl.edu	37	18	13067922	13067922	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C18orf8	29919	genome.wustl.edu	37	18	21109678	21109678	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMA3	3909	genome.wustl.edu	37	18	21451571	21451571	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CABYR	26256	genome.wustl.edu	37	18	21739590	21739590	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL1A	114876	genome.wustl.edu	37	18	21758054	21758054	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IMPACT	55364	genome.wustl.edu	37	18	22029873	22029873	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF521	25925	genome.wustl.edu	37	18	22807259	22807259	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCTD1	284252	genome.wustl.edu	37	18	24039824	24039824	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3C3	5289	genome.wustl.edu	37	18	39617663	39617663	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL17	6139	genome.wustl.edu	37	18	47014920	47014920	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf21	126353	genome.wustl.edu	37	19	758688	758688	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132469	100132469	genome.wustl.edu	37	19	2476418	2476418	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD24	170961	genome.wustl.edu	37	19	4207577	4207577	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLIN4	729359	genome.wustl.edu	37	19	4512285	4512285	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLIN4	729359	genome.wustl.edu	37	19	4512550	4512550	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRS	5802	genome.wustl.edu	37	19	5265111	5265111	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB2	9667	genome.wustl.edu	37	19	5612549	5612549	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VAV1	7409	genome.wustl.edu	37	19	6850766	6850766	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBN3	84467	genome.wustl.edu	37	19	8206926	8206926	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRAM1	84106	genome.wustl.edu	37	19	8564295	8564295	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS10	81794	genome.wustl.edu	37	19	8660650	8660650	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF317	57693	genome.wustl.edu	37	19	9271126	9271126	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR7D4	125958	genome.wustl.edu	37	19	9325321	9325321	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNRPA1L-2	664709	genome.wustl.edu	37	19	11777423	11777423	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC730651	730651	genome.wustl.edu	37	19	12319335	12319335	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC130	81576	genome.wustl.edu	37	19	13873445	13873445	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP8	10270	genome.wustl.edu	37	19	15472541	15472541	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGLYRP2	114770	genome.wustl.edu	37	19	15579486	15579486	+	Silent	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4F2	8529	genome.wustl.edu	37	19	16003355	16003355	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHERP	10523	genome.wustl.edu	37	19	16641397	16641397	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIN3B	23309	genome.wustl.edu	37	19	16973372	16973372	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANO8	57719	genome.wustl.edu	37	19	17436036	17436036	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FCHO1	23149	genome.wustl.edu	37	19	17886852	17886852	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ELL	8178	genome.wustl.edu	37	19	18572531	18572531	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUGP2	10147	genome.wustl.edu	37	19	19105235	19105235	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF14	7561	genome.wustl.edu	37	19	19823179	19823179	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF14	7561	genome.wustl.edu	37	19	19823414	19823414	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF14	7561	genome.wustl.edu	37	19	19823576	19823576	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF493	284443	genome.wustl.edu	37	19	21607382	21607382	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF507	22847	genome.wustl.edu	37	19	32845078	32845078	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR88	126248	genome.wustl.edu	37	19	33639782	33639782	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0355	9710	genome.wustl.edu	37	19	34818450	34818450	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBA2	10054	genome.wustl.edu	37	19	34935951	34935951	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WTIP	126374	genome.wustl.edu	37	19	34983990	34983990	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF599	148103	genome.wustl.edu	37	19	35260390	35260390	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF792	126375	genome.wustl.edu	37	19	35449405	35449405	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAUS5	23354	genome.wustl.edu	37	19	36110931	36110931	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HKR1	284459	genome.wustl.edu	37	19	37854290	37854290	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIPA1L3	23094	genome.wustl.edu	37	19	38573598	38573598	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIRT2	22933	genome.wustl.edu	37	19	39374290	39374290	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN4	57731	genome.wustl.edu	37	19	41038638	41038638	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF227	7770	genome.wustl.edu	37	19	44740328	44740328	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKD2	25865	genome.wustl.edu	37	19	47181872	47181872	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC8A2	6543	genome.wustl.edu	37	19	47969299	47969299	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIG1	3978	genome.wustl.edu	37	19	48657201	48657201	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CGB1	114335	genome.wustl.edu	37	19	49539414	49539414	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AP2A1	160	genome.wustl.edu	37	19	50285029	50285029	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VRK3	51231	genome.wustl.edu	37	19	50498069	50498069	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC7	27036	genome.wustl.edu	37	19	51646000	51646000	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC8	27181	genome.wustl.edu	37	19	51955788	51955788	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FPR2	2358	genome.wustl.edu	37	19	52272432	52272432	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF611	81856	genome.wustl.edu	37	19	53208435	53208435	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF28	7576	genome.wustl.edu	37	19	53302947	53302947	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRSK1	84446	genome.wustl.edu	37	19	55805407	55805407	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF547	284306	genome.wustl.edu	37	19	57889379	57889379	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF772	400720	genome.wustl.edu	37	19	57986365	57986365	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF587	84914	genome.wustl.edu	37	19	58352204	58352204	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF587	84914	genome.wustl.edu	37	19	58370032	58370032	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM28	10155	genome.wustl.edu	37	19	59059218	59059218	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRSN2	80023	genome.wustl.edu	37	20	330288	330288	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf54	113278	genome.wustl.edu	37	20	744386	744386	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIRPB1	10326	genome.wustl.edu	37	20	1552470	1552470	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATRN	8455	genome.wustl.edu	37	20	3540041	3540041	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FERMT1	55612	genome.wustl.edu	37	20	6077679	6077679	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSRP2BP	57325	genome.wustl.edu	37	20	18142496	18142496	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf12	55184	genome.wustl.edu	37	20	18370409	18370409	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BPIFB4	149954	genome.wustl.edu	37	20	31671642	31671642	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf152	140894	genome.wustl.edu	37	20	34618341	34618341	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAMHD1	25939	genome.wustl.edu	37	20	35579999	35579999	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOP1	7150	genome.wustl.edu	37	20	39742794	39742794	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD6	84181	genome.wustl.edu	37	20	40045877	40045877	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EYA2	2139	genome.wustl.edu	37	20	45771768	45771768	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PREX1	57580	genome.wustl.edu	37	20	47246062	47246062	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A8	23315	genome.wustl.edu	37	20	48439605	48439605	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARD6B	84612	genome.wustl.edu	37	20	49366800	49366800	+	Silent	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCAS1	8537	genome.wustl.edu	37	20	52675191	52675191	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMA7	5688	genome.wustl.edu	37	20	60714168	60714168	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIDO1	11083	genome.wustl.edu	37	20	61538656	61538656	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS1	9510	genome.wustl.edu	37	21	28210371	28210371	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTN1	26046	genome.wustl.edu	37	21	30325604	30325604	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFNAR2	3455	genome.wustl.edu	37	21	34632954	34632954	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC28	54943	genome.wustl.edu	37	21	34861098	34861098	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITSN1	6453	genome.wustl.edu	37	21	35124151	35124151	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RUNX1	861	genome.wustl.edu	37	21	36252883	36252883	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC3	7267	genome.wustl.edu	37	21	38463679	38463679	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRWD1	54014	genome.wustl.edu	37	21	40590500	40590500	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSCAM	1826	genome.wustl.edu	37	21	41719705	41719705	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MX1	4599	genome.wustl.edu	37	21	42813698	42813698	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIPK4	54101	genome.wustl.edu	37	21	43162104	43162104	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF295	49854	genome.wustl.edu	37	21	43412872	43412872	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF295	49854	genome.wustl.edu	37	21	43413650	43413650	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRP1	8568	genome.wustl.edu	37	21	45222302	45222302	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP10-2	386679	genome.wustl.edu	37	21	45970783	45970783	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP10-12	386685	genome.wustl.edu	37	21	46117472	46117472	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUMO3	6612	genome.wustl.edu	37	21	46228960	46228960	+	Splice_Site	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCNT	5116	genome.wustl.edu	37	21	47767388	47767388	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCNT	5116	genome.wustl.edu	37	21	47836167	47836167	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLTCL1	8218	genome.wustl.edu	37	22	19210259	19210259	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNB1L	54584	genome.wustl.edu	37	22	19799903	19799903	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED15	51586	genome.wustl.edu	37	22	20939481	20939481	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CABIN1	23523	genome.wustl.edu	37	22	24445681	24445681	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGSM1	129049	genome.wustl.edu	37	22	25315864	25315864	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHEK2	11200	genome.wustl.edu	37	22	29085122	29085122	+	Splice_Site	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYTH4	27128	genome.wustl.edu	37	22	37707086	37707086	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBY1	25776	genome.wustl.edu	37	22	39066985	39066985	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6B	23112	genome.wustl.edu	37	22	40719131	40719131	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL1	25809	genome.wustl.edu	37	22	43442492	43442492	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL12	23170	genome.wustl.edu	37	22	43564129	43564129	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIBC2	26150	genome.wustl.edu	37	22	45813793	45813793	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARSD	414	genome.wustl.edu	37	X	2825591	2825591	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARSD	414	genome.wustl.edu	37	X	2833628	2833628	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNPLA4	8228	genome.wustl.edu	37	X	7889813	7889813	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD4	9758	genome.wustl.edu	37	X	12720067	12720067	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLR7	51284	genome.wustl.edu	37	X	12904754	12904754	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIGA	5277	genome.wustl.edu	37	X	15339761	15339761	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF1AX	1964	genome.wustl.edu	37	X	20156719	20156719	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL34	257240	genome.wustl.edu	37	X	21674883	21674883	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMS	6611	genome.wustl.edu	37	X	22003330	22003330	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXorf58	254158	genome.wustl.edu	37	X	23953452	23953452	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GK	2710	genome.wustl.edu	37	X	30714254	30714254	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMD	1756	genome.wustl.edu	37	X	32382820	32382820	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRG1	5638	genome.wustl.edu	37	X	37285112	37285112	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXorf36	79742	genome.wustl.edu	37	X	45010961	45010961	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A7	84679	genome.wustl.edu	37	X	46466436	46466436	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RP2	6102	genome.wustl.edu	37	X	46713476	46713476	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM10	8241	genome.wustl.edu	37	X	47041380	47041380	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D25	4943	genome.wustl.edu	37	X	48417411	48417411	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDAC6	10013	genome.wustl.edu	37	X	48682667	48682667	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCND1	3750	genome.wustl.edu	37	X	48826120	48826120	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIBC1	158787	genome.wustl.edu	37	X	53457516	53457516	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNK3	65267	genome.wustl.edu	37	X	54324763	54324763	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNORA11	677799	genome.wustl.edu	37	X	54840883	54840883	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRO	7216	genome.wustl.edu	37	X	54957201	54957201	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZXDA	7789	genome.wustl.edu	37	X	57935547	57935547	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PJA1	64219	genome.wustl.edu	37	X	68382065	68382065	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGAT2L6	347516	genome.wustl.edu	37	X	69424883	69424883	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GDPD2	54857	genome.wustl.edu	37	X	69645915	69645915	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A3	84889	genome.wustl.edu	37	X	70149843	70149843	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OGT	8473	genome.wustl.edu	37	X	70775052	70775052	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS26P11	441502	genome.wustl.edu	37	X	71264563	71264563	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDX4	1046	genome.wustl.edu	37	X	72667229	72667229	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIST	7503	genome.wustl.edu	37	X	73042371	73042371	+	RNA	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGEE1	57692	genome.wustl.edu	37	X	75649700	75649700	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGT1	84061	genome.wustl.edu	37	X	77096800	77096800	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLA	2717	genome.wustl.edu	37	X	100662699	100662699	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
H2BFWT	158983	genome.wustl.edu	37	X	103267757	103267757	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMPD3	84443	genome.wustl.edu	37	X	106846195	106846195	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRS4	8471	genome.wustl.edu	37	X	107977087	107977087	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRS4	8471	genome.wustl.edu	37	X	107977759	107977759	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643873	643873	genome.wustl.edu	37	X	110863002	110863002	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A14	11254	genome.wustl.edu	37	X	115582837	115582837	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR44	54521	genome.wustl.edu	37	X	117526798	117526798	+	Nonstop_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THOC2	57187	genome.wustl.edu	37	X	122747905	122747905	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACTRT1	139741	genome.wustl.edu	37	X	127185531	127185531	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCA1	6594	genome.wustl.edu	37	X	128640105	128640105	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A14	9016	genome.wustl.edu	37	X	129479167	129479167	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRMD7	90167	genome.wustl.edu	37	X	131211950	131211950	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM127B	26071	genome.wustl.edu	37	X	134186016	134186016	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CT45A5	441521	genome.wustl.edu	37	X	134948047	134948047	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF6	9459	genome.wustl.edu	37	X	135790898	135790898	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMX	27316	genome.wustl.edu	37	X	135956459	135956459	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR513C	100302114	genome.wustl.edu	37	X	146271228	146271228	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FATE1	89885	genome.wustl.edu	37	X	150891127	150891127	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNMA5	114824	genome.wustl.edu	37	X	152159038	152159038	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRAMEF23	729368	genome.wustl.edu	37	1	13108944	13108944	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBPF1	55672	genome.wustl.edu	37	1	16902844	16902844	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000215908	0	genome.wustl.edu	37	1	16946521	16946521	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYCL1	4610	genome.wustl.edu	37	1	40367035	40367035	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STXBP3	6814	genome.wustl.edu	37	1	109340784	109340784	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSTM2	2946	genome.wustl.edu	37	1	110217456	110217456	+	Nonstop_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTTNBP2NL	55917	genome.wustl.edu	37	1	112999369	112999369	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST2H2BF	440689	genome.wustl.edu	37	1	149783523	149783523	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM46	80128	genome.wustl.edu	37	1	155150626	155150626	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEF2D	4209	genome.wustl.edu	37	1	156453069	156453069	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NTRK1	4914	genome.wustl.edu	37	1	156846290	156846290	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RXRG	6258	genome.wustl.edu	37	1	165406395	165406395	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9A11	284525	genome.wustl.edu	37	1	173551124	173551124	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287822	100287822	genome.wustl.edu	37	1	179153029	179153029	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID4B	51742	genome.wustl.edu	37	1	235394504	235394504	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LYST	1130	genome.wustl.edu	37	1	235840412	235840412	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF26B	55083	genome.wustl.edu	37	1	245849094	245849094	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF638	27332	genome.wustl.edu	37	2	71591149	71591149	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAT8B	51471	genome.wustl.edu	37	2	73928156	73928156	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HK2	3099	genome.wustl.edu	37	2	75061762	75061762	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL1R1	3554	genome.wustl.edu	37	2	102781456	102781456	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLX1	1745	genome.wustl.edu	37	2	172951798	172951798	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC30A	92104	genome.wustl.edu	37	2	178482967	178482967	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179612283	179612283	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SP100	6672	genome.wustl.edu	37	2	231406620	231406620	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM44	375316	genome.wustl.edu	37	2	238742986	238742986	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR35	2859	genome.wustl.edu	37	2	241569709	241569709	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FARP2	9855	genome.wustl.edu	37	2	242381120	242381120	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A6	6533	genome.wustl.edu	37	3	14513736	14513736	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXL2	25827	genome.wustl.edu	37	3	33414735	33414735	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL7A1	1294	genome.wustl.edu	37	3	48625747	48625747	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAB1	23166	genome.wustl.edu	37	3	52557049	52557049	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPAT	5471	genome.wustl.edu	37	4	57267604	57267604	+	Silent	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANXA3	306	genome.wustl.edu	37	4	79525492	79525492	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT4	79633	genome.wustl.edu	37	4	126372411	126372411	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4orf49	84709	genome.wustl.edu	37	4	140201262	140201262	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F11	2160	genome.wustl.edu	37	4	187206956	187206956	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRG1	2483	genome.wustl.edu	37	4	190874265	190874265	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROPN1L	83853	genome.wustl.edu	37	5	10450183	10450183	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPR3	4883	genome.wustl.edu	37	5	32712508	32712508	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC728931	728931	genome.wustl.edu	37	5	43588318	43588318	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF2H2D	730394	genome.wustl.edu	37	5	68868311	68868311	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEC24A	10802	genome.wustl.edu	37	5	133997278	133997278	+	Splice_Site	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMAT2	153527	genome.wustl.edu	37	5	140085264	140085264	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOK3	79930	genome.wustl.edu	37	5	176931310	176931310	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC441166	441166	genome.wustl.edu	37	6	111179990	111179990	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131471	100131471	genome.wustl.edu	37	6	143663590	143663590	+	RNA	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDAC9	9734	genome.wustl.edu	37	7	18868811	18868811	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOD1	10392	genome.wustl.edu	37	7	30490878	30490878	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLEC2L	154790	genome.wustl.edu	37	7	139225185	139225185	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTAGE6P	340307	genome.wustl.edu	37	7	143453340	143453340	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XKR6	286046	genome.wustl.edu	37	8	10755611	10755611	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOBTB2	23221	genome.wustl.edu	37	8	22865139	22865139	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAR	6770	genome.wustl.edu	37	8	38008285	38008285	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGK196	84197	genome.wustl.edu	37	8	42977654	42977654	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLLT3	4300	genome.wustl.edu	37	9	20414343	20414343	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1161	57462	genome.wustl.edu	37	9	34371522	34371522	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLN1	7094	genome.wustl.edu	37	9	35697899	35697899	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287099	100287099	genome.wustl.edu	37	9	35859587	35859587	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF10	79269	genome.wustl.edu	37	9	37861389	37861389	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC441420	441420	genome.wustl.edu	37	9	45376666	45376666	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROR2	4920	genome.wustl.edu	37	9	94519667	94519667	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0368	23392	genome.wustl.edu	37	9	114152381	114152381	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS3	5998	genome.wustl.edu	37	9	116359227	116359227	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPP7	29952	genome.wustl.edu	37	9	140007889	140007889	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000228558	0	genome.wustl.edu	37	10	22006712	22006712	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1217	56243	genome.wustl.edu	37	10	24822124	24822124	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDSS1	23590	genome.wustl.edu	37	10	27012843	27012843	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC387646	387646	genome.wustl.edu	37	10	27536518	27536518	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL13A1	1305	genome.wustl.edu	37	10	71690164	71690164	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC29A3	55315	genome.wustl.edu	37	10	73121947	73121947	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPOCK2	9806	genome.wustl.edu	37	10	73822881	73822881	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP54	159195	genome.wustl.edu	37	10	75289541	75289541	+	Nonsense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADRA2A	150	genome.wustl.edu	37	10	112838203	112838203	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIRT3	23410	genome.wustl.edu	37	11	223832	223832	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR51G2	81282	genome.wustl.edu	37	11	4935968	4935968	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKZ	8525	genome.wustl.edu	37	11	46388933	46388933	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGA3	643834	genome.wustl.edu	37	11	60974006	60974006	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCND1	595	genome.wustl.edu	37	11	69465889	69465889	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TECTA	7007	genome.wustl.edu	37	11	120980180	120980180	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF202	7753	genome.wustl.edu	37	11	123597046	123597046	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSD17B6	8630	genome.wustl.edu	37	12	57167808	57167808	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLIPR1L1	256710	genome.wustl.edu	37	12	75728562	75728562	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH10	196385	genome.wustl.edu	37	12	124382336	124382336	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRY	10129	genome.wustl.edu	37	13	32698924	32698924	+	Silent	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KL	9365	genome.wustl.edu	37	13	33638191	33638191	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSC22D1	8848	genome.wustl.edu	37	13	45148708	45148708	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OLFM4	10562	genome.wustl.edu	37	13	53624654	53624654	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYCBP2	23077	genome.wustl.edu	37	13	77764431	77764431	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCT	1638	genome.wustl.edu	37	13	95114271	95114271	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NID2	22795	genome.wustl.edu	37	14	52481961	52481961	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC2P2	400322	genome.wustl.edu	37	15	23310009	23310009	+	RNA	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA6A	342096	genome.wustl.edu	37	15	74363769	74363769	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA6L5	374650	genome.wustl.edu	37	15	85055550	85055550	+	RNA	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0430	9665	genome.wustl.edu	37	16	15711200	15711200	+	Nonsense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC641298	641298	genome.wustl.edu	37	16	22486466	22486466	+	RNA	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSD3B7	80270	genome.wustl.edu	37	16	30999488	30999488	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRC5	84166	genome.wustl.edu	37	16	57092907	57092907	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CMTM4	146223	genome.wustl.edu	37	16	66657328	66657328	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MON1B	22879	genome.wustl.edu	37	16	77228363	77228363	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBTPS1	8720	genome.wustl.edu	37	16	84087942	84087942	+	Missense_Mutation	SNP	C	C	A			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LLGL1	3996	genome.wustl.edu	37	17	18140155	18140155	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K14	9020	genome.wustl.edu	37	17	43362193	43362193	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC37A4	55073	genome.wustl.edu	37	17	43592154	43592154	+	RNA	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VEZF1	7716	genome.wustl.edu	37	17	56056604	56056604	+	Silent	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN4A	6329	genome.wustl.edu	37	17	62036661	62036661	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131251	100131251	genome.wustl.edu	37	19	1769350	1769350	+	Silent	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHD	56961	genome.wustl.edu	37	19	4280207	4280207	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPP9	91039	genome.wustl.edu	37	19	4714108	4714108	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD209	30835	genome.wustl.edu	37	19	7811382	7811382	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPAMD8	27151	genome.wustl.edu	37	19	17122289	17122289	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTPBP3	84705	genome.wustl.edu	37	19	17449797	17449797	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX49	54555	genome.wustl.edu	37	19	19033201	19033201	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC644189	644189	genome.wustl.edu	37	19	36913675	36913675	+	RNA	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIR3DL2	3812	genome.wustl.edu	37	19	55367217	55367217	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIRPD	128646	genome.wustl.edu	37	20	1532528	1532528	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH7B	57644	genome.wustl.edu	37	20	33568515	33568515	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APCDD1L	164284	genome.wustl.edu	37	20	57036548	57036548	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM11	54033	genome.wustl.edu	37	21	15599580	15599580	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDUFV3	4731	genome.wustl.edu	37	21	44424445	44424445	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGB2	3689	genome.wustl.edu	37	21	46308618	46308618	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFI1	9814	genome.wustl.edu	37	22	32009730	32009730	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ISX	91464	genome.wustl.edu	37	22	35480478	35480478	+	Missense_Mutation	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBF1	6305	genome.wustl.edu	37	22	50899625	50899625	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MT-CO2	0	genome.wustl.edu	37	MT	7963	7963	+	Silent	SNP	A	A	G			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198695	0	genome.wustl.edu	37	MT	14556	14556	+	Missense_Mutation	SNP	A	A	C			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCN4	1183	genome.wustl.edu	37	X	10176541	10176541	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP27X	389856	genome.wustl.edu	37	X	49645493	49645493	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSPT2	23708	genome.wustl.edu	37	X	51487904	51487904	+	Silent	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC442454	442454	genome.wustl.edu	37	X	56763532	56763532	+	RNA	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCFC1	3054	genome.wustl.edu	37	X	153219734	153219734	+	Silent	SNP	G	G	A			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717672	89717672	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL22	6146	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A33	84275	genome.wustl.edu	37	1	9640224	9640225	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSG1	79363	genome.wustl.edu	37	1	16558562	16558562	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL8A2	1296	genome.wustl.edu	37	1	36564598	36564598	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAA2	5563	genome.wustl.edu	37	1	57157094	57157094	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TM2D1	83941	genome.wustl.edu	37	1	62189460	62189461	+	Splice_Site	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK1	3716	genome.wustl.edu	37	1	65306997	65306997	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIER1	57708	genome.wustl.edu	37	1	67450452	67450453	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCA3P	9629	genome.wustl.edu	37	1	87108245	87108246	+	RNA	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR2	1952	genome.wustl.edu	37	1	109810200	109810200	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC200030	200030	genome.wustl.edu	37	1	146035972	146035973	+	Frame_Shift_Ins	INS	-	-	ATCT			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM5C	339479	genome.wustl.edu	37	1	190067763	190067764	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF678	339500	genome.wustl.edu	37	1	227842063	227842064	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB4A	5867	genome.wustl.edu	37	1	229422304	229422305	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRHL1	29841	genome.wustl.edu	37	2	10101406	10101406	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNDC4	64838	genome.wustl.edu	37	2	27717516	27717517	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC74A	90557	genome.wustl.edu	37	2	132287109	132287110	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP5	344148	genome.wustl.edu	37	2	133542405	133542406	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNH7	90134	genome.wustl.edu	37	2	163253438	163253439	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIRP2	129446	genome.wustl.edu	37	2	168104863	168104864	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDK1	5163	genome.wustl.edu	37	2	173451052	173451052	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179528765	179528765	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP1	10787	genome.wustl.edu	37	2	183822266	183822266	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGOL2	151246	genome.wustl.edu	37	2	201437918	201437918	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDH1B	130752	genome.wustl.edu	37	2	207619824	207619825	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A3	6508	genome.wustl.edu	37	2	220494118	220494118	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP40	55230	genome.wustl.edu	37	2	234394237	234394237	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTN6	27255	genome.wustl.edu	37	3	1371501	1371501	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLB1	2720	genome.wustl.edu	37	3	33038784	33038784	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF123	63891	genome.wustl.edu	37	3	49740083	49740083	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPRL2	10641	genome.wustl.edu	37	3	50385996	50385997	+	Splice_Site	INS	-	-	GA			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ID2B	84099	genome.wustl.edu	37	3	62109740	62109740	+	RNA	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH15	22989	genome.wustl.edu	37	3	108229398	108229398	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DRD3	1814	genome.wustl.edu	37	3	113858457	113858457	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000206721	0	genome.wustl.edu	37	3	119929267	119929267	+	RNA	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLSCR5	389158	genome.wustl.edu	37	3	146307469	146307470	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARL14	80117	genome.wustl.edu	37	3	160395185	160395186	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBL1XR1	79718	genome.wustl.edu	37	3	176769342	176769342	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC5	10057	genome.wustl.edu	37	3	183665257	183665257	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLG1	1739	genome.wustl.edu	37	3	196865125	196865126	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR19	57728	genome.wustl.edu	37	4	39206803	39206804	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HELQ	113510	genome.wustl.edu	37	4	84374584	84374584	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FABP2	2169	genome.wustl.edu	37	4	120241914	120241917	+	Frame_Shift_Del	DEL	TGAC	TGAC	-			TCGA-AP-A054-01	TCGA-AP-A054-01	TGAC	TGAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMAA	166785	genome.wustl.edu	37	4	146563526	146563526	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRBA	987	genome.wustl.edu	37	4	151738386	151738386	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC441120	441120	genome.wustl.edu	37	5	1597954	1597955	+	RNA	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LNPEP	4012	genome.wustl.edu	37	5	96315248	96315249	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A4	6583	genome.wustl.edu	37	5	131657936	131657936	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251133	0	genome.wustl.edu	37	5	175716419	175716419	+	RNA	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF44	22838	genome.wustl.edu	37	5	175956159	175956159	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM6	2916	genome.wustl.edu	37	5	178418514	178418515	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYCP2L	221711	genome.wustl.edu	37	6	10907824	10907825	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VARS2	57176	genome.wustl.edu	37	6	30892269	30892269	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPSM3	63940	genome.wustl.edu	37	6	32159229	32159230	+	Frame_Shift_Ins	INS	-	-	C			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTBK1	84630	genome.wustl.edu	37	6	43227330	43227330	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMPD2	6610	genome.wustl.edu	37	6	109764540	109764540	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKD1	221264	genome.wustl.edu	37	6	109850222	109850222	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC4	55146	genome.wustl.edu	37	7	6621848	6621849	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF14	9678	genome.wustl.edu	37	7	11075380	11075381	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-AP-A054-01	TCGA-AP-A054-01	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PION	54103	genome.wustl.edu	37	7	77004377	77004377	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC2	27000	genome.wustl.edu	37	7	102964991	102964992	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEX15	56154	genome.wustl.edu	37	8	30699600	30699601	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBN	4683	genome.wustl.edu	37	8	90967512	90967512	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC37L1	55664	genome.wustl.edu	37	9	4684914	4684917	+	Frame_Shift_Del	DEL	AGAA	AGAA	-			TCGA-AP-A054-01	TCGA-AP-A054-01	AGAA	AGAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA2026	158358	genome.wustl.edu	37	9	5968043	5968044	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IKBKAP	8518	genome.wustl.edu	37	9	111679879	111679879	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC25	548645	genome.wustl.edu	37	9	114411802	114411803	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC2A6	11182	genome.wustl.edu	37	9	136343522	136343522	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMSAP1	157922	genome.wustl.edu	37	9	138710455	138710456	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SFMBT2	57713	genome.wustl.edu	37	10	7285546	7285546	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000236623	0	genome.wustl.edu	37	10	42389210	42389211	+	RNA	INS	-	-	G			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTR7	3363	genome.wustl.edu	37	10	92502287	92502288	+	Splice_Site	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIPSL	266971	genome.wustl.edu	37	10	95718422	95718422	+	RNA	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBF2	81846	genome.wustl.edu	37	11	10011045	10011045	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5W2	390148	genome.wustl.edu	37	11	55682019	55682020	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNHIT2	741	genome.wustl.edu	37	11	64884110	64884110	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUMA1	4926	genome.wustl.edu	37	11	71716317	71716318	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSF1	51773	genome.wustl.edu	37	11	77394814	77394814	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC399965	399965	genome.wustl.edu	37	11	124983405	124983405	+	RNA	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHA5	54477	genome.wustl.edu	37	12	19427544	19427545	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTHLH	5744	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF21A	55605	genome.wustl.edu	37	12	39734129	39734129	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SENP1	29843	genome.wustl.edu	37	12	48458895	48458896	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCFC2	29915	genome.wustl.edu	37	12	104476534	104476535	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287414	100287414	genome.wustl.edu	37	13	28240241	28240241	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247476	0	genome.wustl.edu	37	13	41766026	41766027	+	RNA	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAA16	79612	genome.wustl.edu	37	13	41892982	41892982	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0226L	80183	genome.wustl.edu	37	13	46946110	46946110	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1	5925	genome.wustl.edu	37	13	48916840	48916841	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-AP-A054-01	TCGA-AP-A054-01	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPF3A	65110	genome.wustl.edu	37	13	115057211	115057211	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PYGL	5836	genome.wustl.edu	37	14	51383390	51383390	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35F4	341880	genome.wustl.edu	37	14	58030940	58030943	+	Frame_Shift_Del	DEL	CTCA	CTCA	-			TCGA-AP-A054-01	TCGA-AP-A054-01	CTCA	CTCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLH3	27030	genome.wustl.edu	37	14	75506617	75506618	+	Frame_Shift_Ins	INS	-	-	ATTGAATG			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSP90AA1	3320	genome.wustl.edu	37	14	102551160	102551161	+	In_Frame_Ins	INS	-	-	TCT			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAGE	0	genome.wustl.edu	37	14	102718303	102718303	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS13C	54832	genome.wustl.edu	37	15	62244050	62244050	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247991	0	genome.wustl.edu	37	15	66618098	66618099	+	RNA	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PML	5371	genome.wustl.edu	37	15	74337160	74337162	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-AP-A054-01	TCGA-AP-A054-01	GAA	GAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM8A	58986	genome.wustl.edu	37	16	422544	422545	+	Frame_Shift_Ins	INS	-	-	G			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CREBBP	1387	genome.wustl.edu	37	16	3786792	3786792	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF629	23361	genome.wustl.edu	37	16	30795365	30795365	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBL2	5934	genome.wustl.edu	37	16	53488714	53488714	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBTPS1	8720	genome.wustl.edu	37	16	84103645	84103646	+	Splice_Site	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD11	29123	genome.wustl.edu	37	16	89347320	89347320	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM93	83460	genome.wustl.edu	37	17	3572551	3572551	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DVL2	1856	genome.wustl.edu	37	17	7131299	7131299	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPM1D	8493	genome.wustl.edu	37	17	58740439	58740439	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000252258	0	genome.wustl.edu	37	18	3025533	3025533	+	RNA	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESCO1	114799	genome.wustl.edu	37	18	19120599	19120600	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAPPC8	22878	genome.wustl.edu	37	18	29453418	29453418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C18orf34	374864	genome.wustl.edu	37	18	30913143	30913143	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251302	0	genome.wustl.edu	37	18	72226812	72226812	+	RNA	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100293070	100293070	genome.wustl.edu	37	19	761933	761933	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CALR3	125972	genome.wustl.edu	37	19	16591496	16591497	+	Frame_Shift_Ins	INS	-	-	A			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF780A	284323	genome.wustl.edu	37	19	40582000	40582000	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTBP4	8425	genome.wustl.edu	37	19	41132911	41132911	+	Frame_Shift_Del	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP35	2909	genome.wustl.edu	37	19	47424900	47424900	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC11	114132	genome.wustl.edu	37	19	50462877	50462886	+	Frame_Shift_Del	DEL	AGGGCTGAAG	AGGGCTGAAG	-			TCGA-AP-A054-01	TCGA-AP-A054-01	AGGGCTGAAG	AGGGCTGAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF813	126017	genome.wustl.edu	37	19	53993632	53993633	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-AP-A054-01	TCGA-AP-A054-01	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBL1	5933	genome.wustl.edu	37	20	35696449	35696449	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPN2	6185	genome.wustl.edu	37	20	35869802	35869802	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMYND8	23613	genome.wustl.edu	37	20	45867410	45867410	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNAS	2778	genome.wustl.edu	37	20	57484249	57484250	+	Frame_Shift_Ins	INS	-	-	T			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH26	60437	genome.wustl.edu	37	20	58587784	58587784	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000236553	0	genome.wustl.edu	37	21	17533075	17533076	+	Frame_Shift_Ins	INS	-	-	TC			TCGA-AP-A054-01	TCGA-AP-A054-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPM2	7226	genome.wustl.edu	37	21	45789077	45789077	+	Frame_Shift_Del	DEL	G	G	-			TCGA-AP-A054-01	TCGA-AP-A054-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MSL3	10943	genome.wustl.edu	37	X	11790772	11790772	+	Frame_Shift_Del	DEL	T	T	-			TCGA-AP-A054-01	TCGA-AP-A054-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR64	10149	genome.wustl.edu	37	X	19026119	19026119	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A054-01	TCGA-AP-A054-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIST	7503	genome.wustl.edu	37	X	73072016	73072016	+	RNA	DEL	C	C	-			TCGA-AP-A054-01	TCGA-AP-A054-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
