Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
PLEKHO1	51177	genome.wustl.edu	37	1	150123157	150123157	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPPA2	60676	genome.wustl.edu	37	1	176738803	176738803	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGKV2D-26	28884	genome.wustl.edu	37	2	90025210	90025210	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIRP2	129446	genome.wustl.edu	37	2	168100146	168100146	+	Silent	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COLQ	8292	genome.wustl.edu	37	3	15497439	15497439	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEK11	79858	genome.wustl.edu	37	3	130852772	130852772	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR23A	729627	genome.wustl.edu	37	3	138724643	138724643	+	Silent	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178922321	178922321	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTT	3064	genome.wustl.edu	37	4	3184154	3184154	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS12	81792	genome.wustl.edu	37	5	33637846	33637846	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67588951	67588951	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUSP1	1843	genome.wustl.edu	37	5	172195813	172195813	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPEB4	80315	genome.wustl.edu	37	5	173383061	173383061	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BTN3A3	10384	genome.wustl.edu	37	6	26452610	26452610	+	Missense_Mutation	SNP	C	C	G			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNISR	25957	genome.wustl.edu	37	6	99850560	99850560	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAF3IP2	10758	genome.wustl.edu	37	6	111901456	111901456	+	Silent	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2A7	401427	genome.wustl.edu	37	7	143956495	143956495	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDCD11	22984	genome.wustl.edu	37	10	105181259	105181259	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC43A3	29015	genome.wustl.edu	37	11	57177467	57177467	+	Silent	SNP	G	G	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RELA	5970	genome.wustl.edu	37	11	65421862	65421862	+	Missense_Mutation	SNP	T	T	G			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOX4	50507	genome.wustl.edu	37	11	89059785	89059785	+	RNA	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIA4	2893	genome.wustl.edu	37	11	105845252	105845252	+	Silent	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF5A	3798	genome.wustl.edu	37	12	57963425	57963425	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDK17	5128	genome.wustl.edu	37	12	96692649	96692649	+	Missense_Mutation	SNP	T	T	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYBPC1	4604	genome.wustl.edu	37	12	102061574	102061574	+	Silent	SNP	G	G	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH9	5101	genome.wustl.edu	37	13	67802512	67802512	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4L1	122742	genome.wustl.edu	37	14	20528309	20528309	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NID2	22795	genome.wustl.edu	37	14	52520592	52520592	+	Missense_Mutation	SNP	A	A	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLD2	5338	genome.wustl.edu	37	17	4721824	4721824	+	Missense_Mutation	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7578479	7578479	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000247508	0	genome.wustl.edu	37	17	58073274	58073274	+	RNA	SNP	A	A	C			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF536	9745	genome.wustl.edu	37	19	30935328	30935328	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK2	5126	genome.wustl.edu	37	20	17417465	17417465	+	Silent	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3D	8664	genome.wustl.edu	37	22	36891832	36891832	+	Silent	SNP	A	A	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100129585	100129585	genome.wustl.edu	37	X	65176110	65176110	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDGF1P3	6998	genome.wustl.edu	37	X	109764762	109764762	+	RNA	SNP	C	C	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
L1CAM	3897	genome.wustl.edu	37	X	153135086	153135086	+	Missense_Mutation	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100129550	100129550	genome.wustl.edu	37	3	122610022	122610022	+	RNA	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTTNBP2	83992	genome.wustl.edu	37	7	117364664	117364664	+	Missense_Mutation	SNP	G	G	T			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287382	100287382	genome.wustl.edu	37	9	52605	52605	+	Missense_Mutation	SNP	G	G	C			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BEGAIN	57596	genome.wustl.edu	37	14	101004528	101004528	+	Silent	SNP	G	G	A			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198899	0	genome.wustl.edu	37	MT	9062	9062	+	Missense_Mutation	SNP	T	T	C			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC76	54482	genome.wustl.edu	37	1	100614343	100614343	+	Frame_Shift_Del	DEL	A	A	-			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MALAT1	378938	genome.wustl.edu	37	11	65267739	65267740	+	RNA	DEL	TG	TG	-			TCGA-AP-A0LH-01	TCGA-AP-A0LH-01	TG	TG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
