Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ARID1A	8289	genome.wustl.edu	37	1	27087503	27087503	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTDSPL	10217	genome.wustl.edu	37	3	38017317	38017317	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN11A	11280	genome.wustl.edu	37	3	38888490	38888490	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266101	41266101	+	Missense_Mutation	SNP	C	C	G			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBBX	79740	genome.wustl.edu	37	3	166958670	166958670	+	Missense_Mutation	SNP	A	A	G			TCGA-AX-A062-01	TCGA-AX-A062-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TM4SF19	116211	genome.wustl.edu	37	3	196053830	196053830	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HERC3	8916	genome.wustl.edu	37	4	89574117	89574117	+	Silent	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS16	170690	genome.wustl.edu	37	5	5319209	5319209	+	Silent	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBOAT1	154141	genome.wustl.edu	37	6	20113107	20113107	+	Silent	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MOG	4340	genome.wustl.edu	37	6	29638162	29638162	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDE1C	5137	genome.wustl.edu	37	7	31887642	31887642	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI3	2737	genome.wustl.edu	37	7	42006178	42006178	+	Silent	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5	727	genome.wustl.edu	37	9	123742499	123742499	+	Missense_Mutation	SNP	A	A	C			TCGA-AX-A062-01	TCGA-AX-A062-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEBL	10529	genome.wustl.edu	37	10	21461311	21461311	+	Splice_Site	SNP	C	C	G			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMC4	55130	genome.wustl.edu	37	10	28260140	28260140	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000180913	0	genome.wustl.edu	37	11	6150336	6150336	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR4C13	283092	genome.wustl.edu	37	11	49974284	49974284	+	Missense_Mutation	SNP	T	T	A			TCGA-AX-A062-01	TCGA-AX-A062-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MALAT1	378938	genome.wustl.edu	37	11	65269085	65269085	+	RNA	SNP	A	A	G			TCGA-AX-A062-01	TCGA-AX-A062-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD163L1	283316	genome.wustl.edu	37	12	7528343	7528343	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMBP2	23504	genome.wustl.edu	37	12	130926918	130926918	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AP1G2	8906	genome.wustl.edu	37	14	24031573	24031573	+	Missense_Mutation	SNP	T	T	C			TCGA-AX-A062-01	TCGA-AX-A062-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MIR543	100126335	genome.wustl.edu	37	14	101498380	101498380	+	RNA	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C15orf44	81556	genome.wustl.edu	37	15	65899781	65899781	+	Splice_Site	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MON1B	22879	genome.wustl.edu	37	16	77228731	77228731	+	Silent	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP88	4927	genome.wustl.edu	37	17	5289549	5289549	+	Missense_Mutation	SNP	T	T	C			TCGA-AX-A062-01	TCGA-AX-A062-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAT5B	6777	genome.wustl.edu	37	17	40354455	40354455	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPOP	8405	genome.wustl.edu	37	17	47696405	47696405	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRX	57716	genome.wustl.edu	37	19	40900505	40900505	+	Missense_Mutation	SNP	C	C	T			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CRYBB2	1415	genome.wustl.edu	37	22	25625530	25625530	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000233794	0	genome.wustl.edu	37	GL000225.1	79152	79152	+	Silent	SNP	C	C	A			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPEF1	5475	genome.wustl.edu	37	X	18836172	18836172	+	Silent	SNP	A	A	G			TCGA-AX-A062-01	TCGA-AX-A062-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL39	6170	genome.wustl.edu	37	X	118923932	118923932	+	Missense_Mutation	SNP	T	T	C			TCGA-AX-A062-01	TCGA-AX-A062-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CROCCP2	84809	genome.wustl.edu	37	1	16944806	16944806	+	RNA	SNP	G	G	C			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF3	83860	genome.wustl.edu	37	10	8051225	8051225	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTSD	1509	genome.wustl.edu	37	11	1782613	1782613	+	Missense_Mutation	SNP	C	C	A			TCGA-AX-A062-01	TCGA-AX-A062-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251364	0	genome.wustl.edu	37	11	7462876	7462876	+	RNA	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCND1	595	genome.wustl.edu	37	11	69465985	69465985	+	Nonsense_Mutation	SNP	G	G	T			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMG8	55181	genome.wustl.edu	37	17	57287749	57287749	+	Missense_Mutation	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729057	729057	genome.wustl.edu	37	22	16123793	16123793	+	RNA	SNP	G	G	A			TCGA-AX-A062-01	TCGA-AX-A062-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100294243	100294243	genome.wustl.edu	37	6	3208916	3208921	+	In_Frame_Del	DEL	AGAGAG	AGAGAG	-			TCGA-AX-A062-01	TCGA-AX-A062-01	AGAGAG	AGAGAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC646214	646214	genome.wustl.edu	37	15	21936082	21936082	+	RNA	DEL	T	T	-			TCGA-AX-A062-01	TCGA-AX-A062-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
