Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABL2	27	genome.wustl.edu	37	1	179077029	179077029	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB3GAP2	25782	genome.wustl.edu	37	1	220363468	220363468	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR26	80232	genome.wustl.edu	37	1	224581651	224581651	+	Missense_Mutation	SNP	T	T	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH6	1768	genome.wustl.edu	37	2	84838934	84838934	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFE2L2	4780	genome.wustl.edu	37	2	178098945	178098945	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ORMDL1	94101	genome.wustl.edu	37	2	190647321	190647321	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF385D	79750	genome.wustl.edu	37	3	21792405	21792405	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN23	25930	genome.wustl.edu	37	3	47452297	47452297	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBA5	79876	genome.wustl.edu	37	3	132379394	132379394	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCOLCE2	26577	genome.wustl.edu	37	3	142567144	142567144	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGT2B10	7365	genome.wustl.edu	37	4	69696394	69696394	+	Missense_Mutation	SNP	T	T	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP10	79658	genome.wustl.edu	37	4	148968114	148968114	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA5	56110	genome.wustl.edu	37	5	140746124	140746124	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA12	26025	genome.wustl.edu	37	5	140812105	140812105	+	Silent	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRHL2	79977	genome.wustl.edu	37	8	102644594	102644594	+	Splice_Site	SNP	G	G	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYLC2	1539	genome.wustl.edu	37	9	105767017	105767017	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZMIZ1	57178	genome.wustl.edu	37	10	81063871	81063871	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRMS1	25855	genome.wustl.edu	37	11	66108730	66108730	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000204455	0	genome.wustl.edu	37	11	89595740	89595740	+	Silent	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN6	5777	genome.wustl.edu	37	12	7069296	7069296	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT83	3889	genome.wustl.edu	37	12	52708455	52708455	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBE2N	7334	genome.wustl.edu	37	12	93805013	93805013	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf51	283450	genome.wustl.edu	37	12	112600888	112600888	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH7	4625	genome.wustl.edu	37	14	23885349	23885349	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMED3	23423	genome.wustl.edu	37	15	79614432	79614432	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD2	1106	genome.wustl.edu	37	15	93567735	93567735	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM107	84314	genome.wustl.edu	37	17	8079527	8079527	+	Silent	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC37B	114659	genome.wustl.edu	37	17	30349423	30349423	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CALR3	125972	genome.wustl.edu	37	19	16606600	16606600	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HNRNPUL1	11100	genome.wustl.edu	37	19	41808777	41808777	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUCB1	4924	genome.wustl.edu	37	19	49422495	49422495	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH4	1002	genome.wustl.edu	37	20	60427926	60427926	+	Silent	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OPRL1	4987	genome.wustl.edu	37	20	62730031	62730031	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDM15	63977	genome.wustl.edu	37	21	43236112	43236112	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	1134	1134	+	RNA	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198804	0	genome.wustl.edu	37	MT	7161	7161	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF8L2	347442	genome.wustl.edu	37	X	27766140	27766140	+	Silent	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FTHL17	53940	genome.wustl.edu	37	X	31089933	31089933	+	Silent	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1F	778	genome.wustl.edu	37	X	49074246	49074246	+	Silent	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R3F	89801	genome.wustl.edu	37	X	49157909	49157909	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQSEC2	23096	genome.wustl.edu	37	X	53270998	53270998	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOXF2	84528	genome.wustl.edu	37	X	119293082	119293082	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP36	158763	genome.wustl.edu	37	X	130220356	130220356	+	Silent	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR2	6262	genome.wustl.edu	37	1	237604646	237604646	+	Nonsense_Mutation	SNP	G	G	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFAND2B	130617	genome.wustl.edu	37	2	220072619	220072619	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTN6	27255	genome.wustl.edu	37	3	1424760	1424760	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266101	41266101	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT1	2195	genome.wustl.edu	37	4	187522511	187522511	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC5D	137970	genome.wustl.edu	37	8	35624453	35624453	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAI1	575	genome.wustl.edu	37	8	143558888	143558888	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf66	157983	genome.wustl.edu	37	9	215060	215060	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63829471	63829471	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUOX1	53905	genome.wustl.edu	37	15	45437188	45437188	+	Silent	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGDCC3	9543	genome.wustl.edu	37	15	65623975	65623975	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH3	55567	genome.wustl.edu	37	16	21011750	21011750	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPEP1	1800	genome.wustl.edu	37	16	89696827	89696827	+	Silent	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNJ12	3768	genome.wustl.edu	37	17	21319368	21319368	+	Silent	SNP	C	C	T			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT36	8689	genome.wustl.edu	37	17	39643383	39643383	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VAPA	9218	genome.wustl.edu	37	18	9950399	9950399	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210117	0	genome.wustl.edu	37	MT	5560	5560	+	RNA	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000198786	0	genome.wustl.edu	37	MT	12871	12871	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGFR2	2263	genome.wustl.edu	37	10	123279677	123279677	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720799	89720802	+	Frame_Shift_Del	DEL	TACT	TACT	-			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	TACT	TACT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL2	8085	genome.wustl.edu	37	12	49425664	49425665	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B5-A0JT-01	TCGA-B5-A0JT-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
