Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
GLIS1	148979	genome.wustl.edu	37	1	54060495	54060495	+	Silent	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF3	467	genome.wustl.edu	37	1	212788581	212788581	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACMSD	130013	genome.wustl.edu	37	2	135621176	135621176	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARCH7	64844	genome.wustl.edu	37	2	160608959	160608959	+	Missense_Mutation	SNP	A	A	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNH7	90134	genome.wustl.edu	37	2	163302815	163302815	+	Missense_Mutation	SNP	T	T	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179585878	179585878	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179594419	179594419	+	Silent	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALS2	57679	genome.wustl.edu	37	2	202622444	202622444	+	Silent	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHB1	2047	genome.wustl.edu	37	3	134967172	134967172	+	Silent	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178916936	178916936	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAK	2580	genome.wustl.edu	37	4	858938	858938	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS16	170690	genome.wustl.edu	37	5	5146570	5146570	+	Splice_Site	SNP	T	T	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf42	65250	genome.wustl.edu	37	5	37168962	37168962	+	Silent	SNP	T	T	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67589236	67589236	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645181	645181	genome.wustl.edu	37	5	84845301	84845301	+	RNA	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNCAIP	9627	genome.wustl.edu	37	5	121761103	121761103	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDSN	1041	genome.wustl.edu	37	6	31084618	31084618	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HLA-DPA2	646702	genome.wustl.edu	37	6	33059895	33059895	+	Splice_Site	SNP	C	C	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGL2	5863	genome.wustl.edu	37	6	33260284	33260284	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR2J4	84820	genome.wustl.edu	37	7	44054256	44054256	+	RNA	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKD1L1	168507	genome.wustl.edu	37	7	47921646	47921646	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHKG1	5260	genome.wustl.edu	37	7	56151072	56151072	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS4L2	644619	genome.wustl.edu	37	7	65171540	65171540	+	RNA	SNP	G	G	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	113418769	113418769	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FER1L6	654463	genome.wustl.edu	37	8	124968257	124968257	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GATA3	2625	genome.wustl.edu	37	10	8115824	8115824	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2C8	1558	genome.wustl.edu	37	10	96827092	96827092	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNNM1	26507	genome.wustl.edu	37	10	101117372	101117372	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG16L2	89849	genome.wustl.edu	37	11	72535873	72535873	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI1	2735	genome.wustl.edu	37	12	57864433	57864433	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPHOSPH9	10198	genome.wustl.edu	37	12	123687292	123687292	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTIF3	219402	genome.wustl.edu	37	13	28014332	28014332	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBEA	26960	genome.wustl.edu	37	13	35756573	35756573	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRMT5	10419	genome.wustl.edu	37	14	23393388	23393388	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHE	3497	genome.wustl.edu	37	14	106067360	106067360	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNS	1497	genome.wustl.edu	37	17	3563642	3563642	+	Silent	SNP	G	G	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7578398	7578398	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SULT2A1	6822	genome.wustl.edu	37	19	48386910	48386910	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF460	10794	genome.wustl.edu	37	19	57802716	57802716	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLAGL2	5326	genome.wustl.edu	37	20	30784823	30784823	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERINC3	10955	genome.wustl.edu	37	20	43142575	43142575	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC649264	649264	genome.wustl.edu	37	22	23715928	23715928	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TCN2	6948	genome.wustl.edu	37	22	31011586	31011586	+	Splice_Site	SNP	A	A	G			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR45	11152	genome.wustl.edu	37	X	48932903	48932903	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRCC3	79184	genome.wustl.edu	37	X	154305454	154305454	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUT10	84750	genome.wustl.edu	37	8	33318926	33318926	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA1	3736	genome.wustl.edu	37	12	5020711	5020711	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSPG4	1464	genome.wustl.edu	37	15	75982915	75982915	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0753	9851	genome.wustl.edu	37	17	6531785	6531785	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL7	114881	genome.wustl.edu	37	17	45886525	45886525	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPM1E	22843	genome.wustl.edu	37	17	57043150	57043150	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPF1	5976	genome.wustl.edu	37	19	18967730	18967730	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRRG1	5638	genome.wustl.edu	37	X	37312736	37312736	+	Silent	SNP	G	G	A			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAJC11	55735	genome.wustl.edu	37	1	6727788	6727788	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf46	143384	genome.wustl.edu	37	10	120467080	120467081	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC283685	283685	genome.wustl.edu	37	15	23685826	23685828	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	TCT	TCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000233389	0	genome.wustl.edu	37	19	24064117	24064118	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-B5-A0K3-01	TCGA-B5-A0K3-01	AG	AG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
