Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
MACF1	23499	genome.wustl.edu	37	1	39888202	39888202	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11O-01	TCGA-B5-A11O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCST2	127579	genome.wustl.edu	37	1	155003000	155003000	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNF1	3754	genome.wustl.edu	37	2	11053710	11053710	+	Silent	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLI2	2736	genome.wustl.edu	37	2	121747809	121747809	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MON1A	84315	genome.wustl.edu	37	3	49947684	49947684	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH12	1010	genome.wustl.edu	37	5	21783502	21783502	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM13B	51306	genome.wustl.edu	37	5	137295364	137295364	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA12	26025	genome.wustl.edu	37	5	140812236	140812236	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TJAP1	93643	genome.wustl.edu	37	6	43472676	43472676	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS41	27072	genome.wustl.edu	37	7	38805193	38805193	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM75D1	389763	genome.wustl.edu	37	9	84607295	84607295	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOGA1	112817	genome.wustl.edu	37	10	99358899	99358899	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP10	338322	genome.wustl.edu	37	11	7982612	7982612	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSRP1	6749	genome.wustl.edu	37	11	57099206	57099206	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT12	91683	genome.wustl.edu	37	11	66816193	66816193	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNPTG	84572	genome.wustl.edu	37	16	1411762	1411762	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF229	7772	genome.wustl.edu	37	19	44933147	44933147	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	786	786	+	RNA	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXorf67	340602	genome.wustl.edu	37	X	51149941	51149941	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNC	81493	genome.wustl.edu	37	1	33161089	33161089	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2AK2	5610	genome.wustl.edu	37	2	37334649	37334649	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC85A	114800	genome.wustl.edu	37	2	56419749	56419749	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDPCP	51057	genome.wustl.edu	37	2	63380059	63380059	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTN	7273	genome.wustl.edu	37	2	179535833	179535833	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF1A	547	genome.wustl.edu	37	2	241664738	241664738	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ISY1	57461	genome.wustl.edu	37	3	128849474	128849474	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR87	53836	genome.wustl.edu	37	3	151011961	151011961	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11O-01	TCGA-B5-A11O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936094	178936094	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HTN1	3346	genome.wustl.edu	37	4	70920042	70920042	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AFP	174	genome.wustl.edu	37	4	74310742	74310742	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11O-01	TCGA-B5-A11O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRX1	79192	genome.wustl.edu	37	5	3599605	3599605	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FEM1C	56929	genome.wustl.edu	37	5	114860661	114860661	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA5	56143	genome.wustl.edu	37	5	140202747	140202747	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMA2	3908	genome.wustl.edu	37	6	129637000	129637000	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDCA7L	55536	genome.wustl.edu	37	7	21947981	21947981	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC17	140453	genome.wustl.edu	37	7	100682851	100682851	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKAG2	51422	genome.wustl.edu	37	7	151262838	151262838	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF10	9639	genome.wustl.edu	37	8	1851639	1851639	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD1	64478	genome.wustl.edu	37	8	2976039	2976039	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHA2	59339	genome.wustl.edu	37	8	38814898	38814898	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RB1CC1	9821	genome.wustl.edu	37	8	53548618	53548618	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATAD2	29028	genome.wustl.edu	37	8	124361665	124361665	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TLE1	7088	genome.wustl.edu	37	9	84202721	84202721	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFSF8	944	genome.wustl.edu	37	9	117666367	117666367	+	Silent	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAG3	9531	genome.wustl.edu	37	10	121432134	121432134	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5T2	219464	genome.wustl.edu	37	11	55999828	55999828	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUMA1	4926	genome.wustl.edu	37	11	71717131	71717131	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROBO4	54538	genome.wustl.edu	37	11	124763788	124763788	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNS	2799	genome.wustl.edu	37	12	65146499	65146499	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATXN2	6311	genome.wustl.edu	37	12	111956118	111956118	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX37	57647	genome.wustl.edu	37	12	125438646	125438646	+	Silent	SNP	G	G	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH24	64403	genome.wustl.edu	37	14	23523873	23523873	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH6	4624	genome.wustl.edu	37	14	23866243	23866243	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAX	4149	genome.wustl.edu	37	14	65560514	65560514	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11O-01	TCGA-B5-A11O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC7B	145567	genome.wustl.edu	37	14	91155977	91155977	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADPGK	83440	genome.wustl.edu	37	15	73067393	73067393	+	Silent	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLG	5428	genome.wustl.edu	37	15	89876722	89876722	+	Silent	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL27	246778	genome.wustl.edu	37	16	28511049	28511049	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH2B1	25970	genome.wustl.edu	37	16	28880671	28880671	+	Nonsense_Mutation	SNP	G	G	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100128007	100128007	genome.wustl.edu	37	17	6831291	6831291	+	RNA	SNP	A	A	G			TCGA-B5-A11O-01	TCGA-B5-A11O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPS2	2874	genome.wustl.edu	37	17	7218281	7218281	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GLP2R	9340	genome.wustl.edu	37	17	9760756	9760756	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf101	79701	genome.wustl.edu	37	17	80369395	80369395	+	Nonsense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSHZ3	57616	genome.wustl.edu	37	19	31770068	31770068	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFKL	5211	genome.wustl.edu	37	21	45746069	45746069	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C22orf42	150297	genome.wustl.edu	37	22	32545582	32545582	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11O-01	TCGA-B5-A11O-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643310	643310	genome.wustl.edu	37	X	92542797	92542797	+	RNA	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692905	89692905	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11O-01	TCGA-B5-A11O-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KISS1	3814	genome.wustl.edu	37	1	204159612	204159612	+	Frame_Shift_Del	DEL	T	T	-			TCGA-B5-A11O-01	TCGA-B5-A11O-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC19	283463	genome.wustl.edu	37	12	40915475	40915475	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B5-A11O-01	TCGA-B5-A11O-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
