Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
CYP4Z2P	163720	genome.wustl.edu	37	1	47325446	47325446	+	RNA	SNP	G	G	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VANGL1	81839	genome.wustl.edu	37	1	116206829	116206829	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KHK	3795	genome.wustl.edu	37	2	27320460	27320460	+	Silent	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBM43	375287	genome.wustl.edu	37	2	152107915	152107915	+	Silent	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NMI	9111	genome.wustl.edu	37	2	152132032	152132032	+	Silent	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC141	285025	genome.wustl.edu	37	2	179701756	179701756	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA6	285220	genome.wustl.edu	37	3	97167526	97167526	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL6A5	256076	genome.wustl.edu	37	3	130187695	130187695	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178951964	178951964	+	Missense_Mutation	SNP	G	G	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178952072	178952072	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11S-01	TCGA-B5-A11S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HRG	3273	genome.wustl.edu	37	3	186395044	186395044	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC4	4585	genome.wustl.edu	37	3	195517843	195517843	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPRIN3	285513	genome.wustl.edu	37	4	90170279	90170279	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STOX2	56977	genome.wustl.edu	37	4	184827971	184827971	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIO	7204	genome.wustl.edu	37	5	14290858	14290858	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DAB2	1601	genome.wustl.edu	37	5	39390554	39390554	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAPLN1	1404	genome.wustl.edu	37	5	82948398	82948398	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRTM2	26045	genome.wustl.edu	37	5	138208801	138208801	+	Silent	SNP	C	C	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR2	23304	genome.wustl.edu	37	6	42584989	42584989	+	Silent	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATHL1	80162	genome.wustl.edu	37	11	292052	292052	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP98	4928	genome.wustl.edu	37	11	3722049	3722049	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAX6	5080	genome.wustl.edu	37	11	31815103	31815103	+	Splice_Site	SNP	T	T	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD248	57124	genome.wustl.edu	37	11	66082337	66082337	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN2	6712	genome.wustl.edu	37	11	66454626	66454626	+	Silent	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMP10	4319	genome.wustl.edu	37	11	102649988	102649988	+	Missense_Mutation	SNP	A	A	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDELC1	79070	genome.wustl.edu	37	13	103443397	103443397	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKCH	5583	genome.wustl.edu	37	14	61857945	61857945	+	Silent	SNP	G	G	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNAPC1	6617	genome.wustl.edu	37	14	62229196	62229196	+	Silent	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GALNTL1	57452	genome.wustl.edu	37	14	69792121	69792121	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBLN5	10516	genome.wustl.edu	37	14	92353550	92353550	+	Silent	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AHNAK2	113146	genome.wustl.edu	37	14	105420793	105420793	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR3	6263	genome.wustl.edu	37	15	33855189	33855189	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO5A	4644	genome.wustl.edu	37	15	52676446	52676446	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NTRK3	4916	genome.wustl.edu	37	15	88726684	88726684	+	Silent	SNP	G	G	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NTRK3	4916	genome.wustl.edu	37	15	88799222	88799222	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1H	8912	genome.wustl.edu	37	16	1261517	1261517	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000245950	0	genome.wustl.edu	37	17	59485295	59485295	+	RNA	SNP	G	G	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AZI1	22994	genome.wustl.edu	37	17	79174223	79174223	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IZUMO4	113177	genome.wustl.edu	37	19	2098980	2098980	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC16	94025	genome.wustl.edu	37	19	9062881	9062881	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11S-01	TCGA-B5-A11S-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
P2RY11	5032	genome.wustl.edu	37	19	10224429	10224429	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF486	90649	genome.wustl.edu	37	19	20307780	20307780	+	Nonsense_Mutation	SNP	T	T	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf29	55317	genome.wustl.edu	37	20	3804885	3804885	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRT	11122	genome.wustl.edu	37	20	41400075	41400075	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000215642	0	genome.wustl.edu	37	GL000192.1	140116	140116	+	Silent	SNP	T	T	C			TCGA-B5-A11S-01	TCGA-B5-A11S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FLG	2312	genome.wustl.edu	37	1	152285749	152285749	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP1A2	477	genome.wustl.edu	37	1	160093164	160093164	+	Silent	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBEAL2	23218	genome.wustl.edu	37	3	47046765	47046765	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFAP2B	7021	genome.wustl.edu	37	6	50810959	50810959	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INVS	27130	genome.wustl.edu	37	9	102992081	102992081	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN4A	6329	genome.wustl.edu	37	17	62049140	62049140	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf70	80233	genome.wustl.edu	37	17	79514366	79514366	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR62	284403	genome.wustl.edu	37	19	36595775	36595775	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPTE	7179	genome.wustl.edu	37	21	10934946	10934946	+	Missense_Mutation	SNP	T	T	G			TCGA-B5-A11S-01	TCGA-B5-A11S-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP13-2	337959	genome.wustl.edu	37	21	31720557	31720557	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCT8L2	150160	genome.wustl.edu	37	22	17072972	17072972	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11S-01	TCGA-B5-A11S-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABHD5	51099	genome.wustl.edu	37	3	43732493	43732495	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-B5-A11S-01	TCGA-B5-A11S-01	GGA	GGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717715	89717716	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5I1	10798	genome.wustl.edu	37	11	55703337	55703338	+	Frame_Shift_Ins	INS	-	-	A			TCGA-B5-A11S-01	TCGA-B5-A11S-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
