Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
HIVEP3	59269	genome.wustl.edu	37	1	42047990	42047990	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTA1	6708	genome.wustl.edu	37	1	158650376	158650376	+	Silent	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CENPF	1063	genome.wustl.edu	37	1	214820197	214820197	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR64	128025	genome.wustl.edu	37	1	241964471	241964471	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN1	6711	genome.wustl.edu	37	2	54853150	54853150	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266112	41266112	+	Missense_Mutation	SNP	T	T	G			TCGA-B5-A11V-01	TCGA-B5-A11V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MECOM	2122	genome.wustl.edu	37	3	168818709	168818709	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLR2B	5431	genome.wustl.edu	37	4	57861439	57861439	+	Missense_Mutation	SNP	T	T	C			TCGA-B5-A11V-01	TCGA-B5-A11V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA12	56137	genome.wustl.edu	37	5	140255295	140255295	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC401218	401218	genome.wustl.edu	37	5	172190042	172190042	+	RNA	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAP2	10486	genome.wustl.edu	37	6	17507505	17507505	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H3J	8356	genome.wustl.edu	37	6	27858185	27858185	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNR1	1268	genome.wustl.edu	37	6	88854287	88854287	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPOLB	56903	genome.wustl.edu	37	7	4899668	4899668	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCB4	5244	genome.wustl.edu	37	7	87069080	87069080	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCAPG2	54892	genome.wustl.edu	37	7	158443529	158443529	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANK1	286	genome.wustl.edu	37	8	41526002	41526002	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C9orf79	286234	genome.wustl.edu	37	9	90500987	90500987	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNCG	6623	genome.wustl.edu	37	10	88722373	88722373	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692905	89692905	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89711875	89711875	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIPA	3988	genome.wustl.edu	37	10	90974762	90974762	+	Silent	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1267826	1267826	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV2	89797	genome.wustl.edu	37	11	19955474	19955474	+	Missense_Mutation	SNP	A	A	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHMBP2	3508	genome.wustl.edu	37	11	68703759	68703759	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ODZ4	26011	genome.wustl.edu	37	11	78369110	78369110	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR6X1	390260	genome.wustl.edu	37	11	123624711	123624711	+	Silent	SNP	G	G	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ST14	6768	genome.wustl.edu	37	11	130059643	130059643	+	Silent	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUSP16	80824	genome.wustl.edu	37	12	12630804	12630804	+	Nonsense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERBB3	2065	genome.wustl.edu	37	12	56481806	56481806	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD6	114785	genome.wustl.edu	37	12	57919199	57919199	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKLE2	23141	genome.wustl.edu	37	12	133324776	133324776	+	Nonsense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF6	6049	genome.wustl.edu	37	13	26789362	26789362	+	Silent	SNP	T	T	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASC5	57082	genome.wustl.edu	37	15	40914270	40914270	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSPG4	1464	genome.wustl.edu	37	15	75969570	75969570	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARRDC4	91947	genome.wustl.edu	37	15	98512384	98512384	+	Missense_Mutation	SNP	A	A	C			TCGA-B5-A11V-01	TCGA-B5-A11V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPL3L	6123	genome.wustl.edu	37	16	1997325	1997325	+	Silent	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PALB2	79728	genome.wustl.edu	37	16	23614977	23614977	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP17	55114	genome.wustl.edu	37	16	24942525	24942525	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IRX3	79191	genome.wustl.edu	37	16	54317633	54317633	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSNK2A2	1459	genome.wustl.edu	37	16	58220753	58220753	+	Missense_Mutation	SNP	T	T	G			TCGA-B5-A11V-01	TCGA-B5-A11V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDH8	1006	genome.wustl.edu	37	16	62055241	62055241	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH8	4626	genome.wustl.edu	37	17	10310245	10310245	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOM1L2	146691	genome.wustl.edu	37	17	17766105	17766105	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMCR7	125170	genome.wustl.edu	37	17	18166552	18166552	+	Silent	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRT28	162605	genome.wustl.edu	37	17	38953491	38953491	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS9	8787	genome.wustl.edu	37	17	63223463	63223463	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11V-01	TCGA-B5-A11V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AP1M2	10053	genome.wustl.edu	37	19	10692244	10692244	+	Silent	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF708	7562	genome.wustl.edu	37	19	21477021	21477021	+	Silent	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EML2	24139	genome.wustl.edu	37	19	46124863	46124863	+	Missense_Mutation	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNX21	90203	genome.wustl.edu	37	20	44469298	44469298	+	Silent	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIP2A	23181	genome.wustl.edu	37	21	47957397	47957397	+	Silent	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC8	29801	genome.wustl.edu	37	22	20130367	20130367	+	Missense_Mutation	SNP	A	A	G			TCGA-B5-A11V-01	TCGA-B5-A11V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHANK3	85358	genome.wustl.edu	37	22	51117290	51117290	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000211459	0	genome.wustl.edu	37	MT	1477	1477	+	RNA	SNP	T	T	C			TCGA-B5-A11V-01	TCGA-B5-A11V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D25	4943	genome.wustl.edu	37	X	48417656	48417656	+	Missense_Mutation	SNP	C	C	G			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF8	23133	genome.wustl.edu	37	X	54044120	54044120	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED12	9968	genome.wustl.edu	37	X	70338671	70338671	+	Missense_Mutation	SNP	G	G	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFRSF10A	8797	genome.wustl.edu	37	8	23082280	23082280	+	Missense_Mutation	SNP	C	C	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GJD4	219770	genome.wustl.edu	37	10	35897422	35897422	+	Silent	SNP	C	C	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMXL2	27288	genome.wustl.edu	37	11	7111073	7111073	+	Missense_Mutation	SNP	G	G	A			TCGA-B5-A11V-01	TCGA-B5-A11V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591139	67591149	+	Frame_Shift_Del	DEL	GACCAATACTT	GACCAATACTT	-			TCGA-B5-A11V-01	TCGA-B5-A11V-01	GACCAATACTT	GACCAATACTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1B	57492	genome.wustl.edu	37	6	157405951	157405951	+	Frame_Shift_Del	DEL	C	C	-			TCGA-B5-A11V-01	TCGA-B5-A11V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH11	8701	genome.wustl.edu	37	7	21818691	21818691	+	Frame_Shift_Del	DEL	A	A	-			TCGA-B5-A11V-01	TCGA-B5-A11V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIPK2	28996	genome.wustl.edu	37	7	139416811	139416812	+	Frame_Shift_Ins	INS	-	-	T			TCGA-B5-A11V-01	TCGA-B5-A11V-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
