Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ARID1A	8289	genome.wustl.edu	37	1	27105586	27105586	+	Nonsense_Mutation	SNP	G	G	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK9	255738	genome.wustl.edu	37	1	55518382	55518382	+	Silent	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL11A1	1301	genome.wustl.edu	37	1	103380323	103380323	+	Silent	SNP	A	A	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100133078	100133078	genome.wustl.edu	37	1	148247623	148247623	+	RNA	SNP	T	T	C			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNN	63923	genome.wustl.edu	37	1	175096131	175096131	+	Silent	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USH2A	7399	genome.wustl.edu	37	1	215847594	215847594	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP5	344148	genome.wustl.edu	37	2	133539847	133539847	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000253049	0	genome.wustl.edu	37	3	3144607	3144607	+	RNA	SNP	A	A	C			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN11A	11280	genome.wustl.edu	37	3	38889101	38889101	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKHD1-EIF4EBP3	404734	genome.wustl.edu	37	5	139887431	139887431	+	Missense_Mutation	SNP	G	G	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf41	153222	genome.wustl.edu	37	5	172517703	172517703	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSPA1L	3305	genome.wustl.edu	37	6	31777828	31777828	+	Missense_Mutation	SNP	T	T	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NMBR	4829	genome.wustl.edu	37	6	142399825	142399825	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFR2	7036	genome.wustl.edu	37	7	100225553	100225553	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC17	140453	genome.wustl.edu	37	7	100676865	100676865	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRBV3-1	28619	genome.wustl.edu	37	7	142008727	142008727	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INTS9	55756	genome.wustl.edu	37	8	28747495	28747495	+	RNA	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRKDC	5591	genome.wustl.edu	37	8	48769861	48769861	+	Splice_Site	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OPTN	10133	genome.wustl.edu	37	10	13169808	13169808	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH15	65217	genome.wustl.edu	37	10	55569092	55569092	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692803	89692803	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC16A12	387700	genome.wustl.edu	37	10	91198728	91198728	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2C18	1562	genome.wustl.edu	37	10	96466710	96466710	+	Missense_Mutation	SNP	T	T	C			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRE	5791	genome.wustl.edu	37	10	129868088	129868088	+	Silent	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC17A6	57084	genome.wustl.edu	37	11	22396317	22396317	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTBP3	4054	genome.wustl.edu	37	11	65315025	65315025	+	Silent	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AASDHPPT	60496	genome.wustl.edu	37	11	105967548	105967548	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMBP2	23504	genome.wustl.edu	37	12	130921605	130921605	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SACS	26278	genome.wustl.edu	37	13	23906391	23906391	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO5A	4644	genome.wustl.edu	37	15	52611453	52611453	+	Missense_Mutation	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF592	9640	genome.wustl.edu	37	15	85341899	85341899	+	Silent	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHCBP1	79801	genome.wustl.edu	37	16	46652116	46652116	+	Splice_Site	SNP	C	C	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDPR	55066	genome.wustl.edu	37	16	70190575	70190575	+	Missense_Mutation	SNP	C	C	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCC	1630	genome.wustl.edu	37	18	50278721	50278721	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAG	4099	genome.wustl.edu	37	19	35790479	35790479	+	Silent	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP6-1	337966	genome.wustl.edu	37	21	31986062	31986062	+	Silent	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC37A1	54020	genome.wustl.edu	37	21	43982196	43982196	+	Missense_Mutation	SNP	A	A	G			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210082	0	genome.wustl.edu	37	MT	1969	1969	+	RNA	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CFP	5199	genome.wustl.edu	37	X	47486559	47486559	+	Silent	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHIC1	53344	genome.wustl.edu	37	X	72783327	72783327	+	Silent	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM45B	55855	genome.wustl.edu	37	X	129629236	129629236	+	RNA	SNP	C	C	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL9R	3581	genome.wustl.edu	37	X	155227427	155227427	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC375010	375010	genome.wustl.edu	37	1	142697676	142697676	+	RNA	SNP	T	T	C			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CMTM6	54918	genome.wustl.edu	37	3	32544206	32544206	+	Missense_Mutation	SNP	G	G	C			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB9BP1	9366	genome.wustl.edu	37	5	104435603	104435603	+	RNA	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MT-CO2	0	genome.wustl.edu	37	MT	7594	7594	+	Silent	SNP	T	T	C			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGAG4	340526	genome.wustl.edu	37	X	71349875	71349875	+	Missense_Mutation	SNP	G	G	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESPNP	284729	genome.wustl.edu	37	1	17034456	17034463	+	RNA	DEL	GCGCGCGT	GCGCGCGT	-			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	GCGCGCGT	GCGCGCGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB7B	51043	genome.wustl.edu	37	1	154987886	154987886	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MOSC1	64757	genome.wustl.edu	37	1	220971370	220971371	+	Frame_Shift_Ins	INS	-	-	T			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLAIN2	57606	genome.wustl.edu	37	4	48384739	48384740	+	Frame_Shift_Ins	INS	-	-	A			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591132	67591134	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	GAC	GAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRBV3-1	28619	genome.wustl.edu	37	7	142008723	142008723	+	Frame_Shift_Del	DEL	T	T	-			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EYA1	2138	genome.wustl.edu	37	8	72129010	72129010	+	Frame_Shift_Del	DEL	C	C	-			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLDN7	1366	genome.wustl.edu	37	17	7165396	7165396	+	Frame_Shift_Del	DEL	G	G	-			TCGA-BG-A0MH-01	TCGA-BG-A0MH-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
