Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
PADI3	51702	genome.wustl.edu	37	1	17586185	17586185	+	Missense_Mutation	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN7	5778	genome.wustl.edu	37	1	202119438	202119438	+	Splice_Site	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PASK	23178	genome.wustl.edu	37	2	242076462	242076462	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VGLL4	9686	genome.wustl.edu	37	3	11600890	11600890	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMB2P1	22973	genome.wustl.edu	37	3	49190986	49190986	+	RNA	SNP	A	A	C			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHA3	2042	genome.wustl.edu	37	3	89462340	89462340	+	Missense_Mutation	SNP	C	C	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCHS2	54798	genome.wustl.edu	37	4	155305543	155305543	+	Missense_Mutation	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASA1	5921	genome.wustl.edu	37	5	86672252	86672252	+	Missense_Mutation	SNP	C	C	G			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AQPEP	206338	genome.wustl.edu	37	5	115336875	115336875	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA11	56138	genome.wustl.edu	37	5	140249148	140249148	+	Silent	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA3	56112	genome.wustl.edu	37	5	140724707	140724707	+	Silent	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNDC1	84624	genome.wustl.edu	37	6	159653395	159653395	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC340268	340268	genome.wustl.edu	37	7	9767835	9767835	+	RNA	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WBSCR17	64409	genome.wustl.edu	37	7	70853324	70853324	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASAP1	50807	genome.wustl.edu	37	8	131140248	131140248	+	Missense_Mutation	SNP	C	C	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP6	26953	genome.wustl.edu	37	9	6013095	6013095	+	Missense_Mutation	SNP	T	T	C			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642943	642943	genome.wustl.edu	37	9	95647297	95647297	+	RNA	SNP	A	A	C			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100128771	100128771	genome.wustl.edu	37	9	98908967	98908967	+	RNA	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC123	8872	genome.wustl.edu	37	10	12259467	12259467	+	Splice_Site	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1462	57608	genome.wustl.edu	37	10	30318034	30318034	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRP1	8829	genome.wustl.edu	37	10	33469025	33469025	+	Missense_Mutation	SNP	C	C	G			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC5B	727897	genome.wustl.edu	37	11	1257720	1257720	+	Silent	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3C2A	5286	genome.wustl.edu	37	11	17115924	17115924	+	Silent	SNP	T	T	C			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIRC3	330	genome.wustl.edu	37	11	102206738	102206738	+	Missense_Mutation	SNP	C	C	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SGCG	6445	genome.wustl.edu	37	13	23894810	23894810	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSMC6	5706	genome.wustl.edu	37	14	53184972	53184972	+	Missense_Mutation	SNP	A	A	G			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1H1	1778	genome.wustl.edu	37	14	102477136	102477136	+	Silent	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AQP9	366	genome.wustl.edu	37	15	58467155	58467155	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC38A7	55238	genome.wustl.edu	37	16	58714008	58714008	+	Missense_Mutation	SNP	T	T	C			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFAS	5198	genome.wustl.edu	37	17	8158879	8158879	+	Silent	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM5	4174	genome.wustl.edu	37	22	35809931	35809931	+	Silent	SNP	A	A	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000210082	0	genome.wustl.edu	37	MT	2627	2627	+	RNA	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGIX	79917	genome.wustl.edu	37	X	49019238	49019238	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCF2	4168	genome.wustl.edu	37	X	138713563	138713563	+	Silent	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PASD1	139135	genome.wustl.edu	37	X	150840887	150840887	+	Missense_Mutation	SNP	A	A	G			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB28	9364	genome.wustl.edu	37	4	13462414	13462414	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287357	100287357	genome.wustl.edu	37	15	21009291	21009291	+	RNA	SNP	C	C	T			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAOK2	9344	genome.wustl.edu	37	16	30002432	30002432	+	Missense_Mutation	SNP	G	G	A			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERTAD1	29950	genome.wustl.edu	37	19	40928825	40928825	+	Missense_Mutation	SNP	A	A	G			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRAS	4893	genome.wustl.edu	37	1	115256529	115256529	+	Missense_Mutation	SNP	T	T	C			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645314	645314	genome.wustl.edu	37	2	194141643	194141644	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-BS-A0TD-01	TCGA-BS-A0TD-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
