Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
WRAP73	49856	genome.wustl.edu	37	1	3551759	3551759	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM46	80128	genome.wustl.edu	37	1	155150601	155150601	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CFH	3075	genome.wustl.edu	37	1	196716320	196716320	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN14	5784	genome.wustl.edu	37	1	214549670	214549670	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228525712	228525712	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC389033	389033	genome.wustl.edu	37	2	130680483	130680483	+	RNA	SNP	C	C	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFPI	7035	genome.wustl.edu	37	2	188368465	188368465	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL5A2	1290	genome.wustl.edu	37	2	189899879	189899879	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNS1	7145	genome.wustl.edu	37	2	218758179	218758179	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTNNB1	1499	genome.wustl.edu	37	3	41266101	41266101	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETD2	29072	genome.wustl.edu	37	3	47161949	47161949	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNCAIP	9627	genome.wustl.edu	37	5	121759369	121759369	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GTF2IRD1	9569	genome.wustl.edu	37	7	73959113	73959113	+	Silent	SNP	C	C	G			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LMTK2	22853	genome.wustl.edu	37	7	97822972	97822972	+	Silent	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG9B	285973	genome.wustl.edu	37	7	150721501	150721501	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D2	55357	genome.wustl.edu	37	9	100971188	100971188	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKR1C4	1109	genome.wustl.edu	37	10	5242152	5242152	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRTFDC1	56952	genome.wustl.edu	37	10	25160980	25160980	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717753	89717753	+	Nonsense_Mutation	SNP	A	A	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPING1	710	genome.wustl.edu	37	11	57373520	57373520	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35F2	54733	genome.wustl.edu	37	11	107663446	107663446	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRAP	8315	genome.wustl.edu	37	12	112121036	112121036	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP3K9	4293	genome.wustl.edu	37	14	71199563	71199563	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UACA	55075	genome.wustl.edu	37	15	70960980	70960980	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A11	8402	genome.wustl.edu	37	17	4842178	4842178	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MED13	9969	genome.wustl.edu	37	17	60059675	60059675	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPG5	57724	genome.wustl.edu	37	18	43484003	43484003	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACAA2	10449	genome.wustl.edu	37	18	47329196	47329196	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC16	94025	genome.wustl.edu	37	19	8993434	8993434	+	Silent	SNP	C	C	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FPR3	2359	genome.wustl.edu	37	19	52327410	52327410	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LILRA4	23547	genome.wustl.edu	37	19	54849744	54849744	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP7	199713	genome.wustl.edu	37	19	55453026	55453026	+	Silent	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf43	51507	genome.wustl.edu	37	20	55092171	55092171	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFF2	7032	genome.wustl.edu	37	21	43770092	43770092	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASD2	23551	genome.wustl.edu	37	22	35947831	35947831	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MSL3	10943	genome.wustl.edu	37	X	11777911	11777911	+	Splice_Site	SNP	G	G	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXorf58	254158	genome.wustl.edu	37	X	23929944	23929944	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BCOR	54880	genome.wustl.edu	37	X	39921444	39921444	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1F	778	genome.wustl.edu	37	X	49082400	49082400	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMP15	9210	genome.wustl.edu	37	X	50659598	50659598	+	Silent	SNP	A	A	G			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF8	23133	genome.wustl.edu	37	X	53970623	53970623	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF1	6872	genome.wustl.edu	37	X	70602842	70602842	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYLC1	1538	genome.wustl.edu	37	X	83128425	83128425	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF449	203523	genome.wustl.edu	37	X	134494128	134494128	+	Silent	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRSS16	10279	genome.wustl.edu	37	6	27216936	27216936	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKB	1607	genome.wustl.edu	37	7	14669861	14669861	+	Silent	SNP	C	C	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERCC4	2072	genome.wustl.edu	37	16	14014208	14014208	+	Silent	SNP	C	C	G			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF469	84627	genome.wustl.edu	37	16	88496101	88496101	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27097764	27097765	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP2	5903	genome.wustl.edu	37	2	109388988	109388989	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R1	5295	genome.wustl.edu	37	5	67591135	67591135	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUZ12	23512	genome.wustl.edu	37	17	30267462	30267465	+	Frame_Shift_Del	DEL	CTTA	CTTA	-			TCGA-D1-A0ZN-01	TCGA-D1-A0ZN-01	CTTA	CTTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
