Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
MTF1	4520	genome.wustl.edu	37	1	38305669	38305669	+	Silent	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EVI5	7813	genome.wustl.edu	37	1	93089830	93089830	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNST	163882	genome.wustl.edu	37	1	246784919	246784919	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2W5	441932	genome.wustl.edu	37	1	247654488	247654488	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XIRP1	165904	genome.wustl.edu	37	3	39230143	39230143	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC51	79714	genome.wustl.edu	37	3	48474424	48474424	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMB2	3913	genome.wustl.edu	37	3	49168415	49168415	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MME	4311	genome.wustl.edu	37	3	154858008	154858008	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
N4BP2	55728	genome.wustl.edu	37	4	40124796	40124796	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METTL14	57721	genome.wustl.edu	37	4	119626803	119626803	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP38	84640	genome.wustl.edu	37	4	144127340	144127340	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCTP1	79772	genome.wustl.edu	37	5	94114835	94114835	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSD2	84249	genome.wustl.edu	37	5	139193808	139193808	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT2	2196	genome.wustl.edu	37	5	150946215	150946215	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2AM	8336	genome.wustl.edu	37	6	27860699	27860699	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C6orf132	647024	genome.wustl.edu	37	6	42073045	42073045	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FNDC1	84624	genome.wustl.edu	37	6	159636010	159636010	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRRAP	8295	genome.wustl.edu	37	7	98574219	98574219	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMB4	22798	genome.wustl.edu	37	7	107704329	107704329	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB15	142685	genome.wustl.edu	37	7	123269120	123269120	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC5D	137970	genome.wustl.edu	37	8	35631949	35631949	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PXDNL	137902	genome.wustl.edu	37	8	52321236	52321236	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOX17	64321	genome.wustl.edu	37	8	55370985	55370985	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSMD3	114788	genome.wustl.edu	37	8	113353805	113353805	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP214	8021	genome.wustl.edu	37	9	134027252	134027252	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNORD36C	26813	genome.wustl.edu	37	9	136217712	136217712	+	RNA	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717739	89717739	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KNDC1	85442	genome.wustl.edu	37	10	135003102	135003102	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GYLTL1B	120071	genome.wustl.edu	37	11	45947607	45947607	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf66	220004	genome.wustl.edu	37	11	61250125	61250125	+	Splice_Site	SNP	A	A	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUS81	80198	genome.wustl.edu	37	11	65633514	65633514	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CABP2	51475	genome.wustl.edu	37	11	67287536	67287536	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM5	2915	genome.wustl.edu	37	11	88781038	88781038	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGAT4C	25834	genome.wustl.edu	37	12	86377334	86377334	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL1	57626	genome.wustl.edu	37	13	70681490	70681490	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP11A	23250	genome.wustl.edu	37	13	113510376	113510376	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0556	23247	genome.wustl.edu	37	16	27585233	27585233	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67663300	67663300	+	Splice_Site	SNP	G	G	C			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC27	996	genome.wustl.edu	37	17	45219311	45219311	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGB4	3691	genome.wustl.edu	37	17	73746835	73746835	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB	6294	genome.wustl.edu	37	19	5668295	5668295	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF439	90594	genome.wustl.edu	37	19	11978324	11978324	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHERP	10523	genome.wustl.edu	37	19	16631072	16631072	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSG3	5671	genome.wustl.edu	37	19	43242875	43242875	+	Splice_Site	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLK4	9622	genome.wustl.edu	37	19	51411840	51411840	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB45	84878	genome.wustl.edu	37	19	59028407	59028407	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TFIP11	24144	genome.wustl.edu	37	22	26888032	26888032	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNB2	23654	genome.wustl.edu	37	22	50722387	50722387	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1F	778	genome.wustl.edu	37	X	49070330	49070330	+	Silent	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
P2RY10	27334	genome.wustl.edu	37	X	78216296	78216296	+	Silent	SNP	T	T	C			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CT47B1	643311	genome.wustl.edu	37	X	120008793	120008793	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FHL1	2273	genome.wustl.edu	37	X	135288596	135288596	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPANXN4	441525	genome.wustl.edu	37	X	142113856	142113856	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000245549	0	genome.wustl.edu	37	1	16950956	16950956	+	RNA	SNP	A	A	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289480	100289480	genome.wustl.edu	37	3	32611934	32611934	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8I2	120586	genome.wustl.edu	37	11	55861593	55861593	+	Silent	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ETV6	2120	genome.wustl.edu	37	12	11992238	11992238	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FERMT2	10979	genome.wustl.edu	37	14	53348116	53348116	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000252117	0	genome.wustl.edu	37	15	45219801	45219801	+	RNA	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPTE	7179	genome.wustl.edu	37	21	10971324	10971324	+	Silent	SNP	C	C	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NXF2	56001	genome.wustl.edu	37	X	101572362	101572362	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC730257	730257	genome.wustl.edu	37	1	144519342	144519343	+	RNA	INS	-	-	A			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
METTL14	57721	genome.wustl.edu	37	4	119610560	119610561	+	Frame_Shift_Ins	INS	-	-	T			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720828	89720828	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C21orf58	54058	genome.wustl.edu	37	21	47721985	47721986	+	In_Frame_Ins	INS	-	-	TGG			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EP300	2033	genome.wustl.edu	37	22	41568517	41568518	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A0ZR-01	TCGA-D1-A0ZR-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
