Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AKR7A2P1	246182	genome.wustl.edu	37	1	113466886	113466886	+	RNA	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PEX19	5824	genome.wustl.edu	37	1	160249891	160249891	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGLN1	54583	genome.wustl.edu	37	1	231557050	231557050	+	Silent	SNP	G	G	C			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1486	57624	genome.wustl.edu	37	2	226446763	226446763	+	Silent	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936095	178936095	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A15V-01	TCGA-D1-A15V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C4orf29	80167	genome.wustl.edu	37	4	128905565	128905565	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A15V-01	TCGA-D1-A15V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIFR	3977	genome.wustl.edu	37	5	38490321	38490321	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPD4	167153	genome.wustl.edu	37	5	78936988	78936988	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRG2	9542	genome.wustl.edu	37	5	139422000	139422000	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A15V-01	TCGA-D1-A15V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA8	56140	genome.wustl.edu	37	5	140221077	140221077	+	Silent	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSP90AB1	3326	genome.wustl.edu	37	6	44217197	44217197	+	Silent	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZC3H12D	340152	genome.wustl.edu	37	6	149777866	149777866	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLLT4	4301	genome.wustl.edu	37	6	168352414	168352414	+	Silent	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPY19L2P1	554236	genome.wustl.edu	37	7	35130035	35130035	+	RNA	SNP	A	A	G			TCGA-D1-A15V-01	TCGA-D1-A15V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA13	154664	genome.wustl.edu	37	7	48567847	48567847	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARPC1B	10095	genome.wustl.edu	37	7	98985750	98985750	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF658	26149	genome.wustl.edu	37	9	40772275	40772275	+	Silent	SNP	T	T	C			TCGA-D1-A15V-01	TCGA-D1-A15V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDFY4	57705	genome.wustl.edu	37	10	50025347	50025347	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN2	6712	genome.wustl.edu	37	11	66468011	66468011	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOP2	4839	genome.wustl.edu	37	12	6669954	6669954	+	Splice_Site	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CREBL2	1389	genome.wustl.edu	37	12	12788836	12788836	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf11	55726	genome.wustl.edu	37	12	27081820	27081820	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf35	55196	genome.wustl.edu	37	12	32135984	32135984	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A15V-01	TCGA-D1-A15V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC121456	121456	genome.wustl.edu	37	12	98848854	98848854	+	RNA	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPH3A	22895	genome.wustl.edu	37	12	113321135	113321135	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MGA	23269	genome.wustl.edu	37	15	42052602	42052602	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASL12	51285	genome.wustl.edu	37	15	65350833	65350833	+	Silent	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHBDF1	64285	genome.wustl.edu	37	16	114700	114700	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7577097	7577097	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP4-5	85289	genome.wustl.edu	37	17	39305800	39305800	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLCD3	113026	genome.wustl.edu	37	17	43190339	43190339	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFE2L1	4779	genome.wustl.edu	37	17	46128553	46128553	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3R2	5296	genome.wustl.edu	37	19	18277996	18277996	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R1A	5518	genome.wustl.edu	37	19	52716214	52716214	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAE1	8480	genome.wustl.edu	37	20	55929873	55929873	+	Splice_Site	SNP	G	G	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DUSP22	56940	genome.wustl.edu	37	6	335112	335112	+	Splice_Site	SNP	A	A	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANXA2P3	305	genome.wustl.edu	37	10	66585421	66585421	+	RNA	SNP	C	C	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RTN4RL2	349667	genome.wustl.edu	37	11	57244296	57244296	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID2	196528	genome.wustl.edu	37	12	46243917	46243917	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRC1	9055	genome.wustl.edu	37	15	91517381	91517381	+	Silent	SNP	C	C	G			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM8A	58986	genome.wustl.edu	37	16	424867	424867	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288408	100288408	genome.wustl.edu	37	16	16463457	16463457	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289262	100289262	genome.wustl.edu	37	16	67289795	67289795	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM25	7706	genome.wustl.edu	37	17	54991092	54991092	+	Silent	SNP	G	G	A			TCGA-D1-A15V-01	TCGA-D1-A15V-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000248544	0	genome.wustl.edu	37	5	156803126	156803127	+	RNA	INS	-	-	T			TCGA-D1-A15V-01	TCGA-D1-A15V-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIVM	54841	genome.wustl.edu	37	13	103474424	103474428	+	Frame_Shift_Del	DEL	ACAAA	ACAAA	-			TCGA-D1-A15V-01	TCGA-D1-A15V-01	ACAAA	ACAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIVM	54841	genome.wustl.edu	37	13	103474430	103474431	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-D1-A15V-01	TCGA-D1-A15V-01	TA	TA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
