Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
PRDM16	63976	genome.wustl.edu	37	1	3328334	3328334	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGS21	431704	genome.wustl.edu	37	1	192316470	192316470	+	Silent	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGBD5	79605	genome.wustl.edu	37	1	230492670	230492670	+	Silent	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR2T6	254879	genome.wustl.edu	37	1	248550982	248550982	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2AK2	5610	genome.wustl.edu	37	2	37336399	37336399	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSFA2	6744	genome.wustl.edu	37	2	182767195	182767195	+	Splice_Site	SNP	T	T	C			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RQCD1	9125	genome.wustl.edu	37	2	219445458	219445458	+	Silent	SNP	T	T	C			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BDP1	55814	genome.wustl.edu	37	5	70785355	70785355	+	Silent	SNP	A	A	G			TCGA-D1-A169-01	TCGA-D1-A169-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBS4	7060	genome.wustl.edu	37	5	79336086	79336086	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA2	56113	genome.wustl.edu	37	5	140719242	140719242	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLVS2	134829	genome.wustl.edu	37	6	123384854	123384854	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMK2B	816	genome.wustl.edu	37	7	44259705	44259705	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUC12	10071	genome.wustl.edu	37	7	100634547	100634547	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRSS1	5644	genome.wustl.edu	37	7	142459878	142459878	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FKBP15	23307	genome.wustl.edu	37	9	115959316	115959316	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692905	89692905	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFKB2	4791	genome.wustl.edu	37	10	104156228	104156228	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR8J3	81168	genome.wustl.edu	37	11	55904466	55904466	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLP1	10978	genome.wustl.edu	37	11	57427295	57427295	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYT1	6857	genome.wustl.edu	37	12	79842833	79842833	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CORO1C	23603	genome.wustl.edu	37	12	109046047	109046047	+	Splice_Site	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX54	79039	genome.wustl.edu	37	12	113618737	113618737	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TM9SF2	9375	genome.wustl.edu	37	13	100193874	100193874	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCFD1	23256	genome.wustl.edu	37	14	31112549	31112549	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSTR1	6751	genome.wustl.edu	37	14	38679088	38679088	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNE2	23224	genome.wustl.edu	37	14	64580228	64580228	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A169-01	TCGA-D1-A169-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS13C	54832	genome.wustl.edu	37	15	62214757	62214757	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGAL	3683	genome.wustl.edu	37	16	30492904	30492904	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TP53	7157	genome.wustl.edu	37	17	7578508	7578508	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EVI2A	2123	genome.wustl.edu	37	17	29645403	29645403	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBNO2	22904	genome.wustl.edu	37	19	1119102	1119102	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R1A	5518	genome.wustl.edu	37	19	52716323	52716323	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF808	388558	genome.wustl.edu	37	19	53058472	53058472	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEMG2	6407	genome.wustl.edu	37	20	43850565	43850565	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LSM14B	149986	genome.wustl.edu	37	20	60701479	60701479	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLDN17	26285	genome.wustl.edu	37	21	31538528	31538528	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LZTR1	8216	genome.wustl.edu	37	22	21347150	21347150	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNG2	10369	genome.wustl.edu	37	22	36962539	36962539	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FGD1	2245	genome.wustl.edu	37	X	54494263	54494263	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMCX3	51566	genome.wustl.edu	37	X	100880350	100880350	+	Silent	SNP	T	T	C			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLITRK2	84631	genome.wustl.edu	37	X	144904063	144904063	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM237	65062	genome.wustl.edu	37	2	202507388	202507388	+	Silent	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FREM3	166752	genome.wustl.edu	37	4	144619676	144619676	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A169-01	TCGA-D1-A169-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TULP4	56995	genome.wustl.edu	37	6	158923539	158923539	+	Silent	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPPK1	83481	genome.wustl.edu	37	8	144944640	144944640	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000204449	0	genome.wustl.edu	37	11	89804935	89804935	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRB3	5544	genome.wustl.edu	37	12	11420585	11420585	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR11G2	390439	genome.wustl.edu	37	14	20666309	20666309	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC6	368	genome.wustl.edu	37	16	16284063	16284063	+	Silent	SNP	G	G	C			TCGA-D1-A169-01	TCGA-D1-A169-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALPK2	115701	genome.wustl.edu	37	18	56202715	56202715	+	Silent	SNP	A	A	T			TCGA-D1-A169-01	TCGA-D1-A169-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR4	2828	genome.wustl.edu	37	19	46094674	46094674	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A169-01	TCGA-D1-A169-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NINL	22981	genome.wustl.edu	37	20	25457050	25457055	+	In_Frame_Del	DEL	CTCCCA	CTCCCA	-			TCGA-D1-A169-01	TCGA-D1-A169-01	CTCCCA	CTCCCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4F29P	54055	genome.wustl.edu	37	21	15220616	15220620	+	RNA	DEL	GAAAG	GAAAG	-			TCGA-D1-A169-01	TCGA-D1-A169-01	GAAAG	GAAAG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
