Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
UBE4B	10277	genome.wustl.edu	37	1	10166449	10166449	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf127	148345	genome.wustl.edu	37	1	11008706	11008706	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPEN	23013	genome.wustl.edu	37	1	16260726	16260726	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CROCC	9696	genome.wustl.edu	37	1	17275003	17275003	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1QC	714	genome.wustl.edu	37	1	22973824	22973824	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBXN11	91544	genome.wustl.edu	37	1	26609197	26609197	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID1A	8289	genome.wustl.edu	37	1	27057919	27057919	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCMH1	22955	genome.wustl.edu	37	1	41494275	41494275	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMBX1	127343	genome.wustl.edu	37	1	46978132	46978132	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH3GLB1	51100	genome.wustl.edu	37	1	87181535	87181535	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR11	10903	genome.wustl.edu	37	1	149901206	149901206	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ETV3	2117	genome.wustl.edu	37	1	157095156	157095156	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF6	22926	genome.wustl.edu	37	1	161751785	161751785	+	Silent	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GORAB	92344	genome.wustl.edu	37	1	170521409	170521409	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL20	27252	genome.wustl.edu	37	1	173702998	173702998	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANGPTL1	9068	genome.wustl.edu	37	1	178834480	178834480	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX4	89884	genome.wustl.edu	37	1	180241030	180241030	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TPR	7175	genome.wustl.edu	37	1	186329097	186329097	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OBSCN	84033	genome.wustl.edu	37	1	228474642	228474642	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EGLN1	54583	genome.wustl.edu	37	1	231503381	231503381	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM59B	150946	genome.wustl.edu	37	2	26407195	26407195	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTOF	9381	genome.wustl.edu	37	2	26739428	26739428	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIRC6	57448	genome.wustl.edu	37	2	32640933	32640933	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STRN	6801	genome.wustl.edu	37	2	37193439	37193439	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAMBP	10617	genome.wustl.edu	37	2	74074753	74074753	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGKV1-8	28942	genome.wustl.edu	37	2	89292362	89292362	+	Silent	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF5B	9669	genome.wustl.edu	37	2	99985889	99985889	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000152117	0	genome.wustl.edu	37	2	132258753	132258753	+	Splice_Site	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR39	2863	genome.wustl.edu	37	2	133402852	133402852	+	Silent	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIF1	55183	genome.wustl.edu	37	2	152320461	152320461	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DYNC1I2	1781	genome.wustl.edu	37	2	172584350	172584350	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKAR	150709	genome.wustl.edu	37	2	190541625	190541625	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGAP1	80055	genome.wustl.edu	37	2	197709253	197709253	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMPR2	659	genome.wustl.edu	37	2	203420981	203420981	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PECR	55825	genome.wustl.edu	37	2	216904016	216904016	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDLBP	3069	genome.wustl.edu	37	2	242194546	242194546	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN10A	6336	genome.wustl.edu	37	3	38753913	38753913	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BSN	8927	genome.wustl.edu	37	3	49691964	49691964	+	Silent	SNP	A	A	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MUSTN1	389125	genome.wustl.edu	37	3	52867764	52867764	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUCLG2	8801	genome.wustl.edu	37	3	67546346	67546346	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST2	9435	genome.wustl.edu	37	3	142840774	142840774	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
P2RY1	5028	genome.wustl.edu	37	3	152554110	152554110	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC7A14	57709	genome.wustl.edu	37	3	170201117	170201117	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLGN1	22871	genome.wustl.edu	37	3	173997312	173997312	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIK3CA	5290	genome.wustl.edu	37	3	178936095	178936095	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR1	9948	genome.wustl.edu	37	4	10079466	10079466	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAICS	10606	genome.wustl.edu	37	4	57319885	57319885	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRP72	6731	genome.wustl.edu	37	4	57356749	57356749	+	Silent	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BMP2K	55589	genome.wustl.edu	37	4	79747214	79747214	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAP1GDS1	5910	genome.wustl.edu	37	4	99355205	99355205	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAST	831	genome.wustl.edu	37	5	96073629	96073629	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB15	56121	genome.wustl.edu	37	5	140626784	140626784	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF4B	285643	genome.wustl.edu	37	5	154394962	154394962	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RMND5B	64777	genome.wustl.edu	37	5	177574768	177574768	+	Silent	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GMCL1L	64396	genome.wustl.edu	37	5	177613178	177613178	+	RNA	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RREB1	6239	genome.wustl.edu	37	6	7231900	7231900	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSP	1832	genome.wustl.edu	37	6	7568701	7568701	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF193	7746	genome.wustl.edu	37	6	28195035	28195035	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB12	221527	genome.wustl.edu	37	6	31868022	31868022	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCM3	4172	genome.wustl.edu	37	6	52131452	52131452	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRAM2	9697	genome.wustl.edu	37	6	52368020	52368020	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDM13	59336	genome.wustl.edu	37	6	100056633	100056633	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MICAL1	64780	genome.wustl.edu	37	6	109774991	109774991	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENPP3	5169	genome.wustl.edu	37	6	131962630	131962630	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100131471	100131471	genome.wustl.edu	37	6	143664359	143664359	+	RNA	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBS2	7058	genome.wustl.edu	37	6	169623486	169623486	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST12	55501	genome.wustl.edu	37	7	2472865	2472865	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPSR1	387129	genome.wustl.edu	37	7	34851396	34851396	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC346329	346329	genome.wustl.edu	37	7	65970827	65970827	+	RNA	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRM3	2913	genome.wustl.edu	37	7	86416163	86416163	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRWD1	222229	genome.wustl.edu	37	7	102106430	102106430	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC35G5	83650	genome.wustl.edu	37	8	11188688	11188688	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC5D	137970	genome.wustl.edu	37	8	35406998	35406998	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL15	29088	genome.wustl.edu	37	8	55049192	55049192	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C8orf34	116328	genome.wustl.edu	37	8	69552714	69552714	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM83A	84985	genome.wustl.edu	37	8	124206356	124206356	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOP1MT	116447	genome.wustl.edu	37	8	144392279	144392279	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C8orf73	642475	genome.wustl.edu	37	8	144650010	144650010	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PUF60	22827	genome.wustl.edu	37	8	144899617	144899617	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC39A4	55630	genome.wustl.edu	37	8	145640383	145640383	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RFX3	5991	genome.wustl.edu	37	9	3248069	3248069	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INSL6	11172	genome.wustl.edu	37	9	5185551	5185551	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNK2	65268	genome.wustl.edu	37	9	96030927	96030927	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL15A1	1306	genome.wustl.edu	37	9	101748083	101748083	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF462	58499	genome.wustl.edu	37	9	109691850	109691850	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM32	22954	genome.wustl.edu	37	9	119461052	119461052	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNM1	1759	genome.wustl.edu	37	9	130981011	130981011	+	Splice_Site	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GOLGA2	2801	genome.wustl.edu	37	9	131019783	131019783	+	Nonsense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SETX	23064	genome.wustl.edu	37	9	135205517	135205517	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRDMT1	1787	genome.wustl.edu	37	10	17196680	17196680	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF25	219749	genome.wustl.edu	37	10	38241061	38241061	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH15	65217	genome.wustl.edu	37	10	55973783	55973783	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGR	5995	genome.wustl.edu	37	10	86017664	86017664	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBTD1	80019	genome.wustl.edu	37	10	99329914	99329914	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORCS1	114815	genome.wustl.edu	37	10	108371764	108371764	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf90	118611	genome.wustl.edu	37	10	128193440	128193440	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TH	7054	genome.wustl.edu	37	11	2185588	2185588	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RHOG	391	genome.wustl.edu	37	11	3848954	3848954	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR52K1	390036	genome.wustl.edu	37	11	4510457	4510457	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR10A2	341276	genome.wustl.edu	37	11	6891832	6891832	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNC1	3746	genome.wustl.edu	37	11	17757888	17757888	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM138	51524	genome.wustl.edu	37	11	61135511	61135511	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A12	116085	genome.wustl.edu	37	11	64367308	64367308	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHBP1L1	254102	genome.wustl.edu	37	11	65346593	65346593	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZDHHC24	254359	genome.wustl.edu	37	11	66311324	66311324	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHANK2	22941	genome.wustl.edu	37	11	70336399	70336399	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAB2	9846	genome.wustl.edu	37	11	77937537	77937537	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAT3	120114	genome.wustl.edu	37	11	92565052	92565052	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP42	143872	genome.wustl.edu	37	11	100784255	100784255	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMP10	4319	genome.wustl.edu	37	11	102647384	102647384	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R1B	5519	genome.wustl.edu	37	11	111608179	111608179	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP2R1B	5519	genome.wustl.edu	37	11	111636973	111636973	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MCAM	4162	genome.wustl.edu	37	11	119185693	119185693	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR10S1	219873	genome.wustl.edu	37	11	123847741	123847741	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDON	50937	genome.wustl.edu	37	11	125888230	125888230	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP3	10566	genome.wustl.edu	37	12	4736445	4736445	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1RL	51279	genome.wustl.edu	37	12	7249070	7249070	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRAS	3845	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNH3	23416	genome.wustl.edu	37	12	49943891	49943891	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSFM	10102	genome.wustl.edu	37	12	58190347	58190347	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTDSP2	10106	genome.wustl.edu	37	12	58217771	58217771	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MDM2	4193	genome.wustl.edu	37	12	69233373	69233373	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCT2	10576	genome.wustl.edu	37	12	69980553	69980553	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNC2	3747	genome.wustl.edu	37	12	75442063	75442063	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287749	100287749	genome.wustl.edu	37	12	109889345	109889345	+	Silent	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRAP	8315	genome.wustl.edu	37	12	112103457	112103457	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOS1	4842	genome.wustl.edu	37	12	117665447	117665447	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLIP1	6249	genome.wustl.edu	37	12	122825809	122825809	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MPHOSPH9	10198	genome.wustl.edu	37	12	123679113	123679113	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH10	196385	genome.wustl.edu	37	12	124417928	124417928	+	Silent	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH7	4625	genome.wustl.edu	37	14	23896494	23896494	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUBPL	80224	genome.wustl.edu	37	14	32295834	32295834	+	Splice_Site	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FSCB	84075	genome.wustl.edu	37	14	44974511	44974511	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NIPA2	81614	genome.wustl.edu	37	15	23006735	23006735	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTBK2	146057	genome.wustl.edu	37	15	43069417	43069417	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSK	1445	genome.wustl.edu	37	15	75091753	75091753	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM174B	400451	genome.wustl.edu	37	15	93173572	93173572	+	Silent	SNP	C	C	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK6	5046	genome.wustl.edu	37	15	101910712	101910712	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMDHD2	51005	genome.wustl.edu	37	16	2578480	2578480	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAGPA	51172	genome.wustl.edu	37	16	5075682	5075682	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C16orf72	29035	genome.wustl.edu	37	16	9185957	9185957	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNRC6A	27327	genome.wustl.edu	37	16	24788441	24788441	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289169	100289169	genome.wustl.edu	37	16	29063641	29063641	+	Silent	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUP93	9688	genome.wustl.edu	37	16	56864491	56864491	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBTPS1	8720	genome.wustl.edu	37	16	84132698	84132698	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL36	79786	genome.wustl.edu	37	16	84690772	84690772	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFSF12	8742	genome.wustl.edu	37	17	7460647	7460647	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100289291	100289291	genome.wustl.edu	37	17	11514810	11514810	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYO1D	4642	genome.wustl.edu	37	17	31203812	31203812	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF830	91603	genome.wustl.edu	37	17	33288789	33288789	+	Silent	SNP	T	T	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CA10	56934	genome.wustl.edu	37	17	49731057	49731057	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACE	1636	genome.wustl.edu	37	17	61566372	61566372	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
QRICH2	84074	genome.wustl.edu	37	17	74271928	74271928	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPTOR	57521	genome.wustl.edu	37	17	78921118	78921118	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSG4	147409	genome.wustl.edu	37	18	28991147	28991147	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIAS2	9063	genome.wustl.edu	37	18	44409714	44409714	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KATNAL2	83473	genome.wustl.edu	37	18	44625628	44625628	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMAD7	4092	genome.wustl.edu	37	18	46447954	46447954	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINB13	5275	genome.wustl.edu	37	18	61259600	61259600	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBXO15	201456	genome.wustl.edu	37	18	71807496	71807496	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNDP2	55748	genome.wustl.edu	37	18	72178113	72178113	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAMT	2593	genome.wustl.edu	37	19	1399885	1399885	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC55908	55908	genome.wustl.edu	37	19	11350343	11350343	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100287986	100287986	genome.wustl.edu	37	19	15695367	15695367	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP4F12	66002	genome.wustl.edu	37	19	15794482	15794482	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC388514	388514	genome.wustl.edu	37	19	15871165	15871165	+	RNA	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ELL	8178	genome.wustl.edu	37	19	18561593	18561593	+	Silent	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GATAD2A	54815	genome.wustl.edu	37	19	19576203	19576203	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF429	353088	genome.wustl.edu	37	19	21688578	21688578	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLL4	9757	genome.wustl.edu	37	19	36227689	36227689	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPHS1	4868	genome.wustl.edu	37	19	36340451	36340451	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2B7P1	1556	genome.wustl.edu	37	19	41442352	41442352	+	RNA	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEGF8	1954	genome.wustl.edu	37	19	42838352	42838352	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CEACAM16	388551	genome.wustl.edu	37	19	45209134	45209134	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC3L2	90332	genome.wustl.edu	37	19	45731255	45731255	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5AR1	728	genome.wustl.edu	37	19	47823977	47823977	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLK5	25818	genome.wustl.edu	37	19	51453255	51453255	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF701	55762	genome.wustl.edu	37	19	53085611	53085611	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF579	163033	genome.wustl.edu	37	19	56089504	56089504	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF814	730051	genome.wustl.edu	37	19	58386142	58386142	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF418	147686	genome.wustl.edu	37	19	58438971	58438971	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMX4	56255	genome.wustl.edu	37	20	7967973	7967973	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBD	7056	genome.wustl.edu	37	20	23029302	23029302	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CST2	1470	genome.wustl.edu	37	20	23807136	23807136	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GDF5	8200	genome.wustl.edu	37	20	34022222	34022222	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C20orf132	140699	genome.wustl.edu	37	20	35769657	35769657	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1755	85449	genome.wustl.edu	37	20	36855589	36855589	+	Silent	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARFGEF2	10564	genome.wustl.edu	37	20	47591335	47591335	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UMODL1	89766	genome.wustl.edu	37	21	43549899	43549899	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C21orf33	8209	genome.wustl.edu	37	21	45564807	45564807	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100288065	100288065	genome.wustl.edu	37	22	18064090	18064090	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC116	164592	genome.wustl.edu	37	22	21989099	21989099	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ELFN2	114794	genome.wustl.edu	37	22	37770696	37770696	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR1	9620	genome.wustl.edu	37	22	46929884	46929884	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR1	9620	genome.wustl.edu	37	22	46930182	46930182	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ASB9	140462	genome.wustl.edu	37	X	15262645	15262645	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
YY2	404281	genome.wustl.edu	37	X	21875370	21875370	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GK	2710	genome.wustl.edu	37	X	30739014	30739014	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHST7	56548	genome.wustl.edu	37	X	46434060	46434060	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WDR45	11152	genome.wustl.edu	37	X	48932828	48932828	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CXorf67	340602	genome.wustl.edu	37	X	51150586	51150586	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SSX7	280658	genome.wustl.edu	37	X	52682011	52682011	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP51	158880	genome.wustl.edu	37	X	55513612	55513612	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR8	55613	genome.wustl.edu	37	X	63565045	63565045	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AR	367	genome.wustl.edu	37	X	66765966	66765966	+	Silent	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM155B	27112	genome.wustl.edu	37	X	68749609	68749609	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AWAT2	158835	genome.wustl.edu	37	X	69263813	69263813	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF1	6872	genome.wustl.edu	37	X	70614068	70614068	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RBMXL3	139804	genome.wustl.edu	37	X	114426349	114426349	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AKAP14	158798	genome.wustl.edu	37	X	119048782	119048782	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PNCK	139728	genome.wustl.edu	37	X	152937461	152937461	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STIL	6491	genome.wustl.edu	37	1	47755160	47755160	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LCE1B	353132	genome.wustl.edu	37	1	152785259	152785259	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF11	9826	genome.wustl.edu	37	1	156941579	156941579	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY10	55811	genome.wustl.edu	37	1	167805660	167805660	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABL2	27	genome.wustl.edu	37	1	179087847	179087847	+	Silent	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF14	9928	genome.wustl.edu	37	1	200573062	200573062	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HHIPL2	79802	genome.wustl.edu	37	1	222705345	222705345	+	Silent	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAH14	127602	genome.wustl.edu	37	1	225268286	225268286	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1383	54627	genome.wustl.edu	37	1	232942711	232942711	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNG4	2786	genome.wustl.edu	37	1	235715440	235715440	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMN2	56776	genome.wustl.edu	37	1	240370309	240370309	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF238	10472	genome.wustl.edu	37	1	244217659	244217659	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRM2	6241	genome.wustl.edu	37	2	10262812	10262812	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PAPOLG	64895	genome.wustl.edu	37	2	60987381	60987381	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD20A8P	729171	genome.wustl.edu	37	2	95461761	95461761	+	RNA	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD36	375248	genome.wustl.edu	37	2	97911110	97911110	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
B4GALT4	8702	genome.wustl.edu	37	3	118931503	118931503	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR124	25960	genome.wustl.edu	37	8	37687496	37687496	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC645954	645954	genome.wustl.edu	37	10	30982471	30982471	+	RNA	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C10orf71	118461	genome.wustl.edu	37	10	50533701	50533701	+	Silent	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP54	159195	genome.wustl.edu	37	10	75305336	75305336	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROZ	8858	genome.wustl.edu	37	13	113826130	113826130	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRFN5	145581	genome.wustl.edu	37	14	42356745	42356745	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PARN	5073	genome.wustl.edu	37	16	14576651	14576651	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FUK	197258	genome.wustl.edu	37	16	70497655	70497655	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAT5B	6777	genome.wustl.edu	37	17	40354415	40354415	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TK1	7083	genome.wustl.edu	37	17	76171144	76171144	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF599	148103	genome.wustl.edu	37	19	35251044	35251044	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF324B	388569	genome.wustl.edu	37	19	58966424	58966424	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717672	89717672	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729255	729255	genome.wustl.edu	37	1	53386417	53386417	+	RNA	DEL	A	A	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL11A1	1301	genome.wustl.edu	37	1	103474067	103474067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP40	55230	genome.wustl.edu	37	2	234474223	234474223	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FARP2	9855	genome.wustl.edu	37	2	242381014	242381014	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MBD4	8930	genome.wustl.edu	37	3	129155548	129155548	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TET2	54790	genome.wustl.edu	37	4	106155403	106155404	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	TC	TC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFP42	132625	genome.wustl.edu	37	4	188924330	188924331	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000251018	0	genome.wustl.edu	37	5	162909957	162909957	+	RNA	DEL	A	A	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC100132354	100132354	genome.wustl.edu	37	6	43858933	43858934	+	RNA	INS	-	-	TC			TCGA-D1-A17A-01	TCGA-D1-A17A-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF20L1	51105	genome.wustl.edu	37	8	133837585	133837586	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A17A-01	TCGA-D1-A17A-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89720812	89720812	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MARK4	57787	genome.wustl.edu	37	19	45769513	45769513	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR12	57479	genome.wustl.edu	37	19	50099225	50099225	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SIGLEC14	100049587	genome.wustl.edu	37	19	52146848	52146848	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C21orf128	150147	genome.wustl.edu	37	21	43528481	43528481	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17A-01	TCGA-D1-A17A-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLA2G3	50487	genome.wustl.edu	37	22	31536294	31536295	+	Frame_Shift_Ins	INS	-	-	C			TCGA-D1-A17A-01	TCGA-D1-A17A-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
