Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
MIB2	142678	genome.wustl.edu	37	1	1558903	1558903	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NADK	65220	genome.wustl.edu	37	1	1685737	1685737	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1751	85452	genome.wustl.edu	37	1	1905554	1905554	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPR153	387509	genome.wustl.edu	37	1	6314845	6314845	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLEKHG5	57449	genome.wustl.edu	37	1	6535161	6535161	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAS1R1	80835	genome.wustl.edu	37	1	6631229	6631229	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RERE	473	genome.wustl.edu	37	1	8422885	8422885	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB40	9923	genome.wustl.edu	37	1	22838599	22838599	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EPHB2	2048	genome.wustl.edu	37	1	23240243	23240243	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FCN3	8547	genome.wustl.edu	37	1	27700876	27700876	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GJB4	127534	genome.wustl.edu	37	1	35226978	35226978	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTPS	1503	genome.wustl.edu	37	1	41467863	41467863	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POMGNT1	55624	genome.wustl.edu	37	1	46663514	46663514	+	RNA	SNP	A	A	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BARHL2	343472	genome.wustl.edu	37	1	91182159	91182159	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FRRS1	391059	genome.wustl.edu	37	1	100174538	100174538	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DBT	1629	genome.wustl.edu	37	1	100706417	100706417	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DPH5	51611	genome.wustl.edu	37	1	101467037	101467037	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMY2B	280	genome.wustl.edu	37	1	104122083	104122083	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GNAI3	2773	genome.wustl.edu	37	1	110128958	110128958	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYCP1	6847	genome.wustl.edu	37	1	115537595	115537595	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMGCS2	3158	genome.wustl.edu	37	1	120302487	120302487	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CERS2	29956	genome.wustl.edu	37	1	150941418	150941418	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TDRD10	126668	genome.wustl.edu	37	1	154516586	154516586	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GBAP1	2630	genome.wustl.edu	37	1	155185404	155185404	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GON4L	54856	genome.wustl.edu	37	1	155736403	155736403	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IQGAP3	128239	genome.wustl.edu	37	1	156518522	156518522	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NTRK1	4914	genome.wustl.edu	37	1	156845383	156845383	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFI16	3428	genome.wustl.edu	37	1	158988080	158988080	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAGLN2	8407	genome.wustl.edu	37	1	159890296	159890296	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM78B	149297	genome.wustl.edu	37	1	166135431	166135431	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF6	55827	genome.wustl.edu	37	1	168037681	168037681	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
F5	2153	genome.wustl.edu	37	1	169528428	169528428	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM163A	148753	genome.wustl.edu	37	1	179782263	179782263	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM163A	148753	genome.wustl.edu	37	1	179783105	179783105	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMG7	9887	genome.wustl.edu	37	1	183515450	183515450	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNT2	343450	genome.wustl.edu	37	1	196577422	196577422	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFASC	23114	genome.wustl.edu	37	1	204985520	204985520	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIEXF	27042	genome.wustl.edu	37	1	210012391	210012391	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PROX1	5629	genome.wustl.edu	37	1	214170907	214170907	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CENPF	1063	genome.wustl.edu	37	1	214816385	214816385	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WNT9A	7483	genome.wustl.edu	37	1	228112049	228112049	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCNXL2	80003	genome.wustl.edu	37	1	233121957	233121957	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR11L1	391189	genome.wustl.edu	37	1	248005154	248005154	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ROCK2	9475	genome.wustl.edu	37	2	11338879	11338879	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATAD2B	54454	genome.wustl.edu	37	2	23980784	23980784	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DTNB	1838	genome.wustl.edu	37	2	25611077	25611077	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOSL2	2355	genome.wustl.edu	37	2	28631704	28631704	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHD3	30845	genome.wustl.edu	37	2	31467261	31467261	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIRC6	57448	genome.wustl.edu	37	2	32658772	32658772	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM82A1	151393	genome.wustl.edu	37	2	38179324	38179324	+	Silent	SNP	T	T	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLRAQ1	129285	genome.wustl.edu	37	2	48737227	48737227	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN1	6711	genome.wustl.edu	37	2	54891625	54891625	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHBP1	23301	genome.wustl.edu	37	2	63223864	63223864	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD207	50489	genome.wustl.edu	37	2	71058265	71058265	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GGCX	2677	genome.wustl.edu	37	2	85779092	85779092	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IMMT	10989	genome.wustl.edu	37	2	86371639	86371639	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD20A8P	729171	genome.wustl.edu	37	2	95494758	95494758	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNIP3	30818	genome.wustl.edu	37	2	96012813	96012813	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IWS1	55677	genome.wustl.edu	37	2	128263074	128263074	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPN18	26469	genome.wustl.edu	37	2	131128343	131128343	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THSD7B	80731	genome.wustl.edu	37	2	138033516	138033516	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRPF40A	55660	genome.wustl.edu	37	2	153520415	153520415	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC21B	79809	genome.wustl.edu	37	2	166747050	166747050	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR3	130507	genome.wustl.edu	37	2	170732402	170732402	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBR3	130507	genome.wustl.edu	37	2	170806214	170806214	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AGPS	8540	genome.wustl.edu	37	2	178301497	178301497	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FSIP2	401024	genome.wustl.edu	37	2	186672448	186672448	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FN1	2335	genome.wustl.edu	37	2	216274814	216274814	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STK11IP	114790	genome.wustl.edu	37	2	220473844	220473844	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A3	6508	genome.wustl.edu	37	2	220505609	220505609	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SP140	11262	genome.wustl.edu	37	2	231106120	231106120	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DIS3L2	129563	genome.wustl.edu	37	2	233001224	233001224	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ALPI	248	genome.wustl.edu	37	2	233323081	233323081	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNJ13	3769	genome.wustl.edu	37	2	233633450	233633450	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPC1	2817	genome.wustl.edu	37	2	241404520	241404520	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPR1	3708	genome.wustl.edu	37	3	4753527	4753527	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BRPF1	7862	genome.wustl.edu	37	3	9783721	9783721	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL3	26140	genome.wustl.edu	37	3	9870966	9870966	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC22A14	9389	genome.wustl.edu	37	3	38354586	38354586	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN10A	6336	genome.wustl.edu	37	3	38760296	38760296	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCR8	1237	genome.wustl.edu	37	3	39374799	39374799	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF502	91392	genome.wustl.edu	37	3	44763635	44763635	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FYCO1	79443	genome.wustl.edu	37	3	46000922	46000922	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LTF	4057	genome.wustl.edu	37	3	46479588	46479588	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL18	23276	genome.wustl.edu	37	3	47378196	47378196	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR3	1951	genome.wustl.edu	37	3	48682984	48682984	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR3	1951	genome.wustl.edu	37	3	48697730	48697730	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMB2	3913	genome.wustl.edu	37	3	49167685	49167685	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA2D2	9254	genome.wustl.edu	37	3	50417174	50417174	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS9	56999	genome.wustl.edu	37	3	64607937	64607937	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAGI1	9223	genome.wustl.edu	37	3	65415651	65415651	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAGLN3	29114	genome.wustl.edu	37	3	111732267	111732267	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA2018	205717	genome.wustl.edu	37	3	113376756	113376756	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ILDR1	286676	genome.wustl.edu	37	3	121720276	121720276	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESYT3	83850	genome.wustl.edu	37	3	138181013	138181013	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACPL2	92370	genome.wustl.edu	37	3	141012039	141012039	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB38	253461	genome.wustl.edu	37	3	141163624	141163624	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF10	285313	genome.wustl.edu	37	3	151164718	151164718	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PA2G4P4	647033	genome.wustl.edu	37	3	156528509	156528509	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTX3	5806	genome.wustl.edu	37	3	157160184	157160184	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RSRC1	51319	genome.wustl.edu	37	3	158261994	158261994	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLD1	5337	genome.wustl.edu	37	3	171330169	171330169	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNMB2	10242	genome.wustl.edu	37	3	178560711	178560711	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTBP1	1487	genome.wustl.edu	37	4	1219270	1219270	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC2A9	56606	genome.wustl.edu	37	4	9987346	9987346	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DTHD1	401124	genome.wustl.edu	37	4	36296646	36296646	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCFD2	152579	genome.wustl.edu	37	4	53787024	53787024	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOPX	84525	genome.wustl.edu	37	4	57516863	57516863	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UGT2B11	10720	genome.wustl.edu	37	4	69879873	69879873	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC4A4	8671	genome.wustl.edu	37	4	72399971	72399971	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANKRD56	345079	genome.wustl.edu	37	4	77817906	77817906	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANTXR2	118429	genome.wustl.edu	37	4	80976572	80976572	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IBSP	3381	genome.wustl.edu	37	4	88733023	88733023	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC9B1	150159	genome.wustl.edu	37	4	103870443	103870443	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TACR3	6870	genome.wustl.edu	37	4	104579526	104579526	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GSTCD	79807	genome.wustl.edu	37	4	106763261	106763261	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NUDT6	11162	genome.wustl.edu	37	4	123814193	123814193	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LARP1B	55132	genome.wustl.edu	37	4	129035811	129035811	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDH10	57575	genome.wustl.edu	37	4	134073196	134073196	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FHDC1	85462	genome.wustl.edu	37	4	153874672	153874672	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0922	23240	genome.wustl.edu	37	4	154513671	154513671	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEK1	4750	genome.wustl.edu	37	4	170321441	170321441	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SORBS2	8470	genome.wustl.edu	37	4	186536285	186536285	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDHA	6389	genome.wustl.edu	37	5	256475	256475	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDHAP3	728609	genome.wustl.edu	37	5	1593315	1593315	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDZD2	23037	genome.wustl.edu	37	5	32098579	32098579	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARL15	54622	genome.wustl.edu	37	5	53409139	53409139	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF138P1	379013	genome.wustl.edu	37	5	54826713	54826713	+	RNA	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAST4	375449	genome.wustl.edu	37	5	66459510	66459510	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNPO1	3842	genome.wustl.edu	37	5	72178964	72178964	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HMGCR	3156	genome.wustl.edu	37	5	74646998	74646998	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHFPL2	10184	genome.wustl.edu	37	5	77784762	77784762	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM161B	153396	genome.wustl.edu	37	5	87536685	87536685	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCP2	167227	genome.wustl.edu	37	5	112339641	112339641	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PITX1	5307	genome.wustl.edu	37	5	134367188	134367188	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA3	56145	genome.wustl.edu	37	5	140180965	140180965	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHAC1	56135	genome.wustl.edu	37	5	140308197	140308197	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHB13	56123	genome.wustl.edu	37	5	140594909	140594909	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGB1	56104	genome.wustl.edu	37	5	140731491	140731491	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHGA4	56111	genome.wustl.edu	37	5	140736217	140736217	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HDAC3	8841	genome.wustl.edu	37	5	141008174	141008174	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
G3BP1	10146	genome.wustl.edu	37	5	151179895	151179895	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C5orf4	10826	genome.wustl.edu	37	5	154203063	154203063	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EBF1	1879	genome.wustl.edu	37	5	158140014	158140014	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RANBP17	64901	genome.wustl.edu	37	5	170351478	170351478	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D9B	23061	genome.wustl.edu	37	5	179320259	179320259	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF184	7738	genome.wustl.edu	37	6	27420670	27420670	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HIST1H2BO	8348	genome.wustl.edu	37	6	27861416	27861416	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZSCAN12	9753	genome.wustl.edu	37	6	28358526	28358526	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BAG6	7917	genome.wustl.edu	37	6	31612090	31612090	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATF6B	1388	genome.wustl.edu	37	6	32089055	32089055	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FKBPL	63943	genome.wustl.edu	37	6	32096687	32096687	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITPR3	3710	genome.wustl.edu	37	6	33635636	33635636	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRFN2	57497	genome.wustl.edu	37	6	40400349	40400349	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TREM1	54210	genome.wustl.edu	37	6	41248741	41248741	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAF8	129685	genome.wustl.edu	37	6	42025185	42025185	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRERF1	55809	genome.wustl.edu	37	6	42227461	42227461	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MEP1A	4224	genome.wustl.edu	37	6	46806777	46806777	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DST	667	genome.wustl.edu	37	6	56469288	56469288	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHIP	55023	genome.wustl.edu	37	6	79668220	79668220	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF292	23036	genome.wustl.edu	37	6	87969169	87969169	+	Missense_Mutation	SNP	A	A	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MMS22L	253714	genome.wustl.edu	37	6	97627335	97627335	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SOBP	55084	genome.wustl.edu	37	6	107827628	107827628	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA1244	57221	genome.wustl.edu	37	6	138584202	138584202	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TXLNB	167838	genome.wustl.edu	37	6	139609844	139609844	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TULP4	56995	genome.wustl.edu	37	6	158735163	158735163	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBS2	7058	genome.wustl.edu	37	6	169632141	169632141	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COX19	90639	genome.wustl.edu	37	7	1012825	1012825	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAD1L1	8379	genome.wustl.edu	37	7	1976404	1976404	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LFNG	3955	genome.wustl.edu	37	7	2566829	2566829	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SDK1	221935	genome.wustl.edu	37	7	4167035	4167035	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THSD7A	221981	genome.wustl.edu	37	7	11446941	11446941	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NFE2L3	9603	genome.wustl.edu	37	7	26225110	26225110	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBX3	11335	genome.wustl.edu	37	7	26246036	26246036	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AMPH	273	genome.wustl.edu	37	7	38466574	38466574	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VPS41	27072	genome.wustl.edu	37	7	38857473	38857473	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SBDS	51119	genome.wustl.edu	37	7	66456165	66456165	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AUTS2	26053	genome.wustl.edu	37	7	70252292	70252292	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCL24	6369	genome.wustl.edu	37	7	75442687	75442687	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARPC1A	10552	genome.wustl.edu	37	7	98951746	98951746	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF498	221785	genome.wustl.edu	37	7	99227619	99227619	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRN3	54674	genome.wustl.edu	37	7	110762840	110762840	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRRC4	64101	genome.wustl.edu	37	7	127670023	127670023	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SVOPL	136306	genome.wustl.edu	37	7	138310793	138310793	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP6V0A4	50617	genome.wustl.edu	37	7	138444498	138444498	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC643438	643438	genome.wustl.edu	37	7	148334428	148334428	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATG9B	285973	genome.wustl.edu	37	7	150715498	150715498	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRN2	5799	genome.wustl.edu	37	7	157449064	157449064	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF10	9639	genome.wustl.edu	37	8	1905104	1905104	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XKR6	286046	genome.wustl.edu	37	8	10756199	10756199	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DOK2	9046	genome.wustl.edu	37	8	21767296	21767296	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC25A37	51312	genome.wustl.edu	37	8	23386590	23386590	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRIM35	23087	genome.wustl.edu	37	8	27168355	27168355	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPA1	8989	genome.wustl.edu	37	8	72967731	72967731	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAU2	27067	genome.wustl.edu	37	8	74525998	74525998	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WWP1	11059	genome.wustl.edu	37	8	87460686	87460686	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSGIN2	734	genome.wustl.edu	37	8	90937237	90937237	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NBN	4683	genome.wustl.edu	37	8	90949269	90949269	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DSCC1	79075	genome.wustl.edu	37	8	120867983	120867983	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRMT12	55039	genome.wustl.edu	37	8	125463285	125463285	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHF20L1	51105	genome.wustl.edu	37	8	133806801	133806801	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAPRT1	93100	genome.wustl.edu	37	8	144657594	144657594	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP39	80728	genome.wustl.edu	37	8	145770812	145770812	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TYRP1	7306	genome.wustl.edu	37	9	12708024	12708024	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTSL1	92949	genome.wustl.edu	37	9	18889711	18889711	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS6	6194	genome.wustl.edu	37	9	19376329	19376329	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
AQP3	360	genome.wustl.edu	37	9	33442166	33442166	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC642406	642406	genome.wustl.edu	37	9	40503182	40503182	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF658	26149	genome.wustl.edu	37	9	40774963	40774963	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TJP2	9414	genome.wustl.edu	37	9	71852823	71852823	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMC5	23137	genome.wustl.edu	37	9	72967220	72967220	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF510	22869	genome.wustl.edu	37	9	99538316	99538316	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL27A1	85301	genome.wustl.edu	37	9	116930187	116930187	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM129B	64855	genome.wustl.edu	37	9	130279252	130279252	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CERCAM	51148	genome.wustl.edu	37	9	131198123	131198123	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS13	11093	genome.wustl.edu	37	9	136321278	136321278	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMSAP1	157922	genome.wustl.edu	37	9	138710417	138710417	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM69B	138311	genome.wustl.edu	37	9	139617928	139617928	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LCN15	389812	genome.wustl.edu	37	9	139658342	139658342	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELF2	10659	genome.wustl.edu	37	10	11259447	11259447	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NMT2	9397	genome.wustl.edu	37	10	15172253	15172253	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP12	94134	genome.wustl.edu	37	10	32197451	32197451	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ANK3	288	genome.wustl.edu	37	10	61828706	61828706	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89692904	89692904	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTEN	5728	genome.wustl.edu	37	10	89717695	89717695	+	Nonsense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EXOC6	54536	genome.wustl.edu	37	10	94669266	94669266	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LCOR	84458	genome.wustl.edu	37	10	98715396	98715396	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRP12	23223	genome.wustl.edu	37	10	99160849	99160849	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCC2	1244	genome.wustl.edu	37	10	101591842	101591842	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PKD2L1	9033	genome.wustl.edu	37	10	102058385	102058385	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XPNPEP1	7511	genome.wustl.edu	37	10	111651532	111651532	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HSPA12A	259217	genome.wustl.edu	37	10	118434792	118434792	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRK5	2869	genome.wustl.edu	37	10	121207764	121207764	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATE1	11101	genome.wustl.edu	37	10	123662085	123662085	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACADSB	36	genome.wustl.edu	37	10	124802660	124802660	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PIDD	55367	genome.wustl.edu	37	11	799897	799897	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRGPRE	116534	genome.wustl.edu	37	11	3249755	3249755	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHRNA10	57053	genome.wustl.edu	37	11	3687577	3687577	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000186232	0	genome.wustl.edu	37	11	4351478	4351478	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRVI1	10335	genome.wustl.edu	37	11	10622483	10622483	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MICAL2	9645	genome.wustl.edu	37	11	12237867	12237867	+	Splice_Site	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARNTL	406	genome.wustl.edu	37	11	13387107	13387107	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYOD1	4654	genome.wustl.edu	37	11	17741690	17741690	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NAV2	89797	genome.wustl.edu	37	11	20117243	20117243	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACCS	84680	genome.wustl.edu	37	11	44096218	44096218	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRJ	5795	genome.wustl.edu	37	11	48188871	48188871	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OR5T1	390155	genome.wustl.edu	37	11	56044076	56044076	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBP	5007	genome.wustl.edu	37	11	59376069	59376069	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RASGRP2	10235	genome.wustl.edu	37	11	64503137	64503137	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPTBN2	6712	genome.wustl.edu	37	11	66475076	66475076	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARNS1	57571	genome.wustl.edu	37	11	67191928	67191928	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP5	4041	genome.wustl.edu	37	11	68177484	68177484	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP6R3	55291	genome.wustl.edu	37	11	68341614	68341614	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCND1	595	genome.wustl.edu	37	11	69466021	69466021	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP35	57558	genome.wustl.edu	37	11	77921626	77921626	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRCP	5547	genome.wustl.edu	37	11	82564222	82564222	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLG2	1740	genome.wustl.edu	37	11	83676499	83676499	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTMR2	8898	genome.wustl.edu	37	11	95568541	95568541	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAML2	84441	genome.wustl.edu	37	11	95825653	95825653	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHLDB1	23187	genome.wustl.edu	37	11	118518698	118518698	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBL	867	genome.wustl.edu	37	11	119103241	119103241	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXRED1	55572	genome.wustl.edu	37	11	126142924	126142924	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf45	219833	genome.wustl.edu	37	11	128773290	128773290	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ST14	6768	genome.wustl.edu	37	11	130066280	130066280	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC6A13	6540	genome.wustl.edu	37	12	330182	330182	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNA5	3741	genome.wustl.edu	37	12	5153711	5153711	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP5	8078	genome.wustl.edu	37	12	6972496	6972496	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIN2B	2904	genome.wustl.edu	37	12	13716503	13716503	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC728622	728622	genome.wustl.edu	37	12	17142133	17142133	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf39	80763	genome.wustl.edu	37	12	21679818	21679818	+	Splice_Site	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRMP	4033	genome.wustl.edu	37	12	25259932	25259932	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C12orf11	55726	genome.wustl.edu	37	12	27064214	27064214	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CNTN1	1272	genome.wustl.edu	37	12	41312548	41312548	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADAMTS20	80070	genome.wustl.edu	37	12	43944952	43944952	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADCY6	112	genome.wustl.edu	37	12	49164673	49164673	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMNL3	91010	genome.wustl.edu	37	12	50044573	50044573	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LARP4	113251	genome.wustl.edu	37	12	50869510	50869510	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SCN8A	6334	genome.wustl.edu	37	12	52200866	52200866	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ITGA5	3678	genome.wustl.edu	37	12	54793513	54793513	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCKAP1L	3071	genome.wustl.edu	37	12	54936412	54936412	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NEUROD4	58158	genome.wustl.edu	37	12	55421002	55421002	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57556224	57556224	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LRP1	4035	genome.wustl.edu	37	12	57605766	57605766	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OTOGL	283310	genome.wustl.edu	37	12	80750215	80750215	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPFIA2	8499	genome.wustl.edu	37	12	81833826	81833826	+	Splice_Site	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CUX2	23316	genome.wustl.edu	37	12	111731306	111731306	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX5	64211	genome.wustl.edu	37	12	113906001	113906001	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBX3	6926	genome.wustl.edu	37	12	115109929	115109929	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PXN	5829	genome.wustl.edu	37	12	120651943	120651943	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRSF9	8683	genome.wustl.edu	37	12	120901824	120901824	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC15A4	121260	genome.wustl.edu	37	12	129299428	129299428	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EP400	57634	genome.wustl.edu	37	12	132522340	132522340	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHFR	55743	genome.wustl.edu	37	12	133430022	133430022	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MTUS2	23281	genome.wustl.edu	37	13	30054352	30054352	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MLNR	2862	genome.wustl.edu	37	13	49796243	49796243	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BIVM	54841	genome.wustl.edu	37	13	103492161	103492161	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ING1	3621	genome.wustl.edu	37	13	111365324	111365324	+	Nonsense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGEF7	8874	genome.wustl.edu	37	13	111932909	111932909	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TUBGCP3	10426	genome.wustl.edu	37	13	113176744	113176744	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FOXG1	2290	genome.wustl.edu	37	14	29237879	29237879	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMX1	81542	genome.wustl.edu	37	14	51712043	51712043	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC440180	440180	genome.wustl.edu	37	14	57509007	57509007	+	RNA	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPM1A	5494	genome.wustl.edu	37	14	60752341	60752341	+	Splice_Site	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTLL5	23093	genome.wustl.edu	37	14	76211872	76211872	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATXN3	4287	genome.wustl.edu	37	14	92537316	92537316	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERPINA4	5267	genome.wustl.edu	37	14	95035833	95035833	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
XRCC3	7517	genome.wustl.edu	37	14	104169586	104169586	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R13B	23368	genome.wustl.edu	37	14	104206283	104206283	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TMEM179	388021	genome.wustl.edu	37	14	105061517	105061517	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHV4-28	28400	genome.wustl.edu	37	14	106780764	106780764	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM189A1	23359	genome.wustl.edu	37	15	29488646	29488646	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000221138	0	genome.wustl.edu	37	15	33256249	33256249	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR3	6263	genome.wustl.edu	37	15	33952507	33952507	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RYR3	6263	genome.wustl.edu	37	15	34105701	34105701	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
THBS1	7057	genome.wustl.edu	37	15	39886399	39886399	+	Splice_Site	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCHFR	2644	genome.wustl.edu	37	15	41059477	41059477	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STRC	161497	genome.wustl.edu	37	15	43999752	43999752	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF3J	8669	genome.wustl.edu	37	15	44843113	44843113	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAPK6	5597	genome.wustl.edu	37	15	52353495	52353495	+	Splice_Site	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNC13C	440279	genome.wustl.edu	37	15	54592505	54592505	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF23	9493	genome.wustl.edu	37	15	69718690	69718690	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCN4	10021	genome.wustl.edu	37	15	73635767	73635767	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D2B	23102	genome.wustl.edu	37	15	78305213	78305213	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LINS	55180	genome.wustl.edu	37	15	101120777	101120777	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCSK6	5046	genome.wustl.edu	37	15	101847443	101847443	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CCDC154	645811	genome.wustl.edu	37	16	1487856	1487856	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF598	90850	genome.wustl.edu	37	16	2052654	2052654	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLX4	84464	genome.wustl.edu	37	16	3644469	3644469	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CARHSP1	23589	genome.wustl.edu	37	16	8952207	8952207	+	Missense_Mutation	SNP	T	T	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GRIN2A	2903	genome.wustl.edu	37	16	9858493	9858493	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TEKT5	146279	genome.wustl.edu	37	16	10788617	10788617	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIAA0430	9665	genome.wustl.edu	37	16	15728789	15728789	+	Splice_Site	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP2A1	487	genome.wustl.edu	37	16	28905901	28905901	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAZ	4150	genome.wustl.edu	37	16	29819933	29819933	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARMC5	79798	genome.wustl.edu	37	16	31473680	31473680	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CSDAP1	440359	genome.wustl.edu	37	16	31580100	31580100	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPGRIP1L	23322	genome.wustl.edu	37	16	53726257	53726257	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM192A	80011	genome.wustl.edu	37	16	57201040	57201040	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTCF	10664	genome.wustl.edu	37	16	67662298	67662298	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C16orf48	84080	genome.wustl.edu	37	16	67700043	67700043	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HAS3	3038	genome.wustl.edu	37	16	69143879	69143879	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HYDIN	54768	genome.wustl.edu	37	16	70889141	70889141	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZFHX3	463	genome.wustl.edu	37	16	72829701	72829701	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CMIP	80790	genome.wustl.edu	37	16	81737565	81737565	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DNAAF1	123872	genome.wustl.edu	37	16	84193342	84193342	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC43A2	124935	genome.wustl.edu	37	17	1519900	1519900	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RTN4RL1	146760	genome.wustl.edu	37	17	1841096	1841096	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP1	22861	genome.wustl.edu	37	17	5424849	5424849	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM6B	23135	genome.wustl.edu	37	17	7750989	7750989	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH1	4619	genome.wustl.edu	37	17	10404064	10404064	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MAP2K4	6416	genome.wustl.edu	37	17	11998907	11998907	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC732391	732391	genome.wustl.edu	37	17	15469118	15469118	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TNFAIP1	7126	genome.wustl.edu	37	17	26668262	26668262	+	Splice_Site	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MRPL45	84311	genome.wustl.edu	37	17	36454529	36454529	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf98	388381	genome.wustl.edu	37	17	36991465	36991465	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNB1	782	genome.wustl.edu	37	17	37343158	37343158	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WIPF2	147179	genome.wustl.edu	37	17	38420978	38420978	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ACLY	47	genome.wustl.edu	37	17	40024082	40024082	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DHX58	79132	genome.wustl.edu	37	17	40256845	40256845	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EZH1	2145	genome.wustl.edu	37	17	40874874	40874874	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OSBPL7	114881	genome.wustl.edu	37	17	45897609	45897609	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPOP	8405	genome.wustl.edu	37	17	47696740	47696740	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPOP	8405	genome.wustl.edu	37	17	47699360	47699360	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DLX3	1747	genome.wustl.edu	37	17	48070853	48070853	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPAG9	9043	genome.wustl.edu	37	17	49067944	49067944	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SRSF1	6426	genome.wustl.edu	37	17	56083273	56083273	+	Silent	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
VMP1	81671	genome.wustl.edu	37	17	57851164	57851164	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCAF7	10238	genome.wustl.edu	37	17	61662609	61662609	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC390806	390806	genome.wustl.edu	37	17	61688337	61688337	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA8	10351	genome.wustl.edu	37	17	66878067	66878067	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC42EP4	23580	genome.wustl.edu	37	17	71282413	71282413	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UNK	85451	genome.wustl.edu	37	17	73820373	73820373	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LGALS3BP	3959	genome.wustl.edu	37	17	76967746	76967746	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBX4	8535	genome.wustl.edu	37	17	77808525	77808525	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C17orf70	80233	genome.wustl.edu	37	17	79514274	79514274	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GPS1	2873	genome.wustl.edu	37	17	80012553	80012553	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC16A3	9123	genome.wustl.edu	37	17	80194609	80194609	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UTS2R	2837	genome.wustl.edu	37	17	80332320	80332320	+	Silent	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELF4	56853	genome.wustl.edu	37	18	34844715	34844715	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TSHZ1	10194	genome.wustl.edu	37	18	72998008	72998008	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF236	7776	genome.wustl.edu	37	18	74616441	74616441	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HCN2	610	genome.wustl.edu	37	19	603890	603890	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA7	10347	genome.wustl.edu	37	19	1051209	1051209	+	Missense_Mutation	SNP	G	G	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ABCA7	10347	genome.wustl.edu	37	19	1051997	1051997	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf71	100128569	genome.wustl.edu	37	19	3543846	3543846	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZBTB7A	51341	genome.wustl.edu	37	19	4054697	4054697	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SAFB2	9667	genome.wustl.edu	37	19	5616281	5616281	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMARCA4	6597	genome.wustl.edu	37	19	11145728	11145728	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAB3D	9545	genome.wustl.edu	37	19	11446353	11446353	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF791	163049	genome.wustl.edu	37	19	12738563	12738563	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRDX2	7001	genome.wustl.edu	37	19	12911596	12911596	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GCDH	2639	genome.wustl.edu	37	19	13008557	13008557	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD97	976	genome.wustl.edu	37	19	14507908	14507908	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
OCEL1	79629	genome.wustl.edu	37	19	17337911	17337911	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAK3	3718	genome.wustl.edu	37	19	17945447	17945447	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPF1	5976	genome.wustl.edu	37	19	18965730	18965730	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX49	54555	genome.wustl.edu	37	19	19032693	19032693	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GMIP	51291	genome.wustl.edu	37	19	19740909	19740909	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF430	80264	genome.wustl.edu	37	19	21239479	21239479	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC400682	400682	genome.wustl.edu	37	19	21838381	21838381	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UQCRFS1	7386	genome.wustl.edu	37	19	29698487	29698487	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLIP3	25999	genome.wustl.edu	37	19	36515405	36515405	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC400696	400696	genome.wustl.edu	37	19	40172107	40172107	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C19orf47	126526	genome.wustl.edu	37	19	40827943	40827943	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CYP2A13	1553	genome.wustl.edu	37	19	41595953	41595953	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PSG7	5676	genome.wustl.edu	37	19	43430712	43430712	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
APOC4	346	genome.wustl.edu	37	19	45445568	45445568	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PPP1R13L	10848	genome.wustl.edu	37	19	45889095	45889095	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DMPK	1760	genome.wustl.edu	37	19	46281423	46281423	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EHD2	30846	genome.wustl.edu	37	19	48244201	48244201	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FAM83E	54854	genome.wustl.edu	37	19	49114037	49114037	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TRPM4	54795	genome.wustl.edu	37	19	49686388	49686388	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MYH14	79784	genome.wustl.edu	37	19	50785025	50785025	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POLD1	5424	genome.wustl.edu	37	19	50912082	50912082	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF331	55422	genome.wustl.edu	37	19	54080864	54080864	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAIR1	3903	genome.wustl.edu	37	19	54867604	54867604	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FIZ1	84922	genome.wustl.edu	37	19	56104854	56104854	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF582	147948	genome.wustl.edu	37	19	56896148	56896148	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SNPH	9751	genome.wustl.edu	37	20	1281227	1281227	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TGM6	343641	genome.wustl.edu	37	20	2375961	2375961	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SMOX	54498	genome.wustl.edu	37	20	4163027	4163027	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ADRA1D	146	genome.wustl.edu	37	20	4228724	4228724	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESF1	51575	genome.wustl.edu	37	20	13750554	13750554	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RRBP1	6238	genome.wustl.edu	37	20	17597404	17597404	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EFCAB8	388795	genome.wustl.edu	37	20	31480052	31480052	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BPIFB2	80341	genome.wustl.edu	37	20	31596456	31596456	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BPIFB1	92747	genome.wustl.edu	37	20	31877773	31877773	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCOA6	23054	genome.wustl.edu	37	20	33320380	33320380	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SLC32A1	140679	genome.wustl.edu	37	20	37356120	37356120	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTPRT	11122	genome.wustl.edu	37	20	41419980	41419980	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KCNK15	60598	genome.wustl.edu	37	20	43378827	43378827	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MC3R	4159	genome.wustl.edu	37	20	54824734	54824734	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RAE1	8480	genome.wustl.edu	37	20	55941931	55941931	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LAMA5	3911	genome.wustl.edu	37	20	60907709	60907709	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNJ1	8867	genome.wustl.edu	37	21	34004016	34004016	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNJ1	8867	genome.wustl.edu	37	21	34012043	34012043	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF295	49854	genome.wustl.edu	37	21	43413036	43413036	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CBS	875	genome.wustl.edu	37	21	44492252	44492252	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP10-4	386672	genome.wustl.edu	37	21	45994618	45994618	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KRTAP12-2	353323	genome.wustl.edu	37	21	46086427	46086427	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IL17RA	23765	genome.wustl.edu	37	22	17589915	17589915	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CECR2	27443	genome.wustl.edu	37	22	18028074	18028074	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRAME	23532	genome.wustl.edu	37	22	22893400	22893400	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RGL4	266747	genome.wustl.edu	37	22	24036132	24036132	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPB1	51733	genome.wustl.edu	37	22	24919641	24919641	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC28	23331	genome.wustl.edu	37	22	28378723	28378723	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TTC28	23331	genome.wustl.edu	37	22	28492237	28492237	+	Missense_Mutation	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GAL3ST1	9514	genome.wustl.edu	37	22	30951763	30951763	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LIMK2	3985	genome.wustl.edu	37	22	31658767	31658767	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRR14L	253143	genome.wustl.edu	37	22	32084183	32084183	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLA2G6	8398	genome.wustl.edu	37	22	38528999	38528999	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SERHL2	253190	genome.wustl.edu	37	22	42967190	42967190	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CELSR1	9620	genome.wustl.edu	37	22	46931221	46931221	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLCN4	1183	genome.wustl.edu	37	X	10180635	10180635	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP6	395	genome.wustl.edu	37	X	11160423	11160423	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTPS2	56474	genome.wustl.edu	37	X	16717111	16717111	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KLHL34	257240	genome.wustl.edu	37	X	21675237	21675237	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TAB3	257397	genome.wustl.edu	37	X	30873652	30873652	+	Nonsense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP9X	8239	genome.wustl.edu	37	X	41026800	41026800	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TBC1D25	4943	genome.wustl.edu	37	X	48418481	48418481	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
GATA1	2623	genome.wustl.edu	37	X	48650810	48650810	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CACNA1F	778	genome.wustl.edu	37	X	49062163	49062163	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DGKK	139189	genome.wustl.edu	37	X	50134570	50134570	+	Missense_Mutation	SNP	T	T	C			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHROOM4	57477	genome.wustl.edu	37	X	50350812	50350812	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PJA1	64219	genome.wustl.edu	37	X	68381244	68381244	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NONO	4841	genome.wustl.edu	37	X	70516832	70516832	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ERCC6L	54821	genome.wustl.edu	37	X	71427502	71427502	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKRF	55922	genome.wustl.edu	37	X	118723673	118723673	+	Missense_Mutation	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NKAP	79576	genome.wustl.edu	37	X	119077322	119077322	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CD40LG	959	genome.wustl.edu	37	X	135736571	135736571	+	Missense_Mutation	SNP	A	A	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MECP2	4204	genome.wustl.edu	37	X	153296524	153296524	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATP6AP1	537	genome.wustl.edu	37	X	153662052	153662052	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCHD2	57540	genome.wustl.edu	37	1	11561798	11561798	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NPPA	4878	genome.wustl.edu	37	1	11907726	11907726	+	Missense_Mutation	SNP	T	T	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGSF21	84966	genome.wustl.edu	37	1	18703361	18703361	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KDM4A	9682	genome.wustl.edu	37	1	44159763	44159763	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOTCH2NL	388677	genome.wustl.edu	37	1	145273386	145273386	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CFHR4	10877	genome.wustl.edu	37	1	196881925	196881925	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NID1	4811	genome.wustl.edu	37	1	236205358	236205358	+	Silent	SNP	G	G	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FMN2	56776	genome.wustl.edu	37	1	240256392	240256392	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCLK3	85443	genome.wustl.edu	37	3	36756869	36756869	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CAMKV	79012	genome.wustl.edu	37	3	49898890	49898890	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
MSX1	4487	genome.wustl.edu	37	4	4861745	4861745	+	Missense_Mutation	SNP	C	C	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FTMT	94033	genome.wustl.edu	37	5	121187928	121187928	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PCDHA7	56141	genome.wustl.edu	37	5	140214745	140214745	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JARID2	3720	genome.wustl.edu	37	6	15507446	15507446	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CGA	1081	genome.wustl.edu	37	6	87797874	87797874	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UTRN	7402	genome.wustl.edu	37	6	144858754	144858754	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
HOXA9	3205	genome.wustl.edu	37	7	27204919	27204919	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
POM121C	100101267	genome.wustl.edu	37	7	75051540	75051540	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PVRIG	79037	genome.wustl.edu	37	7	99817897	99817897	+	Silent	SNP	A	A	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDLIM2	64236	genome.wustl.edu	37	8	22451333	22451333	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC392335	392335	genome.wustl.edu	37	9	66513503	66513503	+	RNA	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CTSL2	1515	genome.wustl.edu	37	9	99799010	99799010	+	Nonsense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NOTCH1	4851	genome.wustl.edu	37	9	139396913	139396913	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C11orf9	745	genome.wustl.edu	37	11	61533505	61533505	+	Silent	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP30	84749	genome.wustl.edu	37	12	109509480	109509480	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CDC42BPB	9578	genome.wustl.edu	37	14	103434809	103434809	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IGHG2	3501	genome.wustl.edu	37	14	106110879	106110879	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NRN1L	123904	genome.wustl.edu	37	16	67919738	67919738	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UTP18	51096	genome.wustl.edu	37	17	49338072	49338072	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COIL	8161	genome.wustl.edu	37	17	55038329	55038329	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENPP7	339221	genome.wustl.edu	37	17	77709121	77709121	+	Missense_Mutation	SNP	C	C	T			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARHGAP33	115703	genome.wustl.edu	37	19	36279175	36279175	+	Silent	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CPT1C	126129	genome.wustl.edu	37	19	50216289	50216289	+	Missense_Mutation	SNP	C	C	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NINL	22981	genome.wustl.edu	37	20	25457292	25457292	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PDZD4	57595	genome.wustl.edu	37	X	153069506	153069506	+	Missense_Mutation	SNP	G	G	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
C1orf135	79000	genome.wustl.edu	37	1	26161695	26161695	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS6KA1	6195	genome.wustl.edu	37	1	26900616	26900616	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PRG4	10216	genome.wustl.edu	37	1	186277936	186277936	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LOC729234	729234	genome.wustl.edu	37	2	96687157	96687157	+	RNA	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
IFIH1	64135	genome.wustl.edu	37	2	163123794	163123794	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FBLN2	2199	genome.wustl.edu	37	3	13612588	13612588	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
TOP2B	7155	genome.wustl.edu	37	3	25651066	25651068	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL7A1	1294	genome.wustl.edu	37	3	48612871	48612871	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
STAB1	23166	genome.wustl.edu	37	3	52550119	52550119	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
EIF2A	83939	genome.wustl.edu	37	3	150289746	150289746	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NCEH1	57552	genome.wustl.edu	37	3	172351857	172351857	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
BOD1L	259282	genome.wustl.edu	37	4	13615990	13615991	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CLGN	1047	genome.wustl.edu	37	4	141313502	141313502	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SYNPO	11346	genome.wustl.edu	37	5	150028582	150028582	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SH3PXD2B	285590	genome.wustl.edu	37	5	171809110	171809111	+	Frame_Shift_Ins	INS	-	-	G			TCGA-D1-A17D-01	TCGA-D1-A17D-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PHACTR2	9749	genome.wustl.edu	37	6	144081696	144081696	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
WIPF3	644150	genome.wustl.edu	37	7	29874404	29874404	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ENSG00000245176	0	genome.wustl.edu	37	8	26223819	26223819	+	RNA	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ESRP1	54845	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RIMS2	9699	genome.wustl.edu	37	8	104898242	104898242	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
COL27A1	85301	genome.wustl.edu	37	9	116930030	116930030	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ARID5B	84159	genome.wustl.edu	37	10	63850705	63850705	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LDB3	11155	genome.wustl.edu	37	10	88428502	88428502	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
KIF20B	9585	genome.wustl.edu	37	10	91497987	91497987	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ATE1	11101	genome.wustl.edu	37	10	123600765	123600765	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
USP47	55031	genome.wustl.edu	37	11	11970052	11970052	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CASP5	838	genome.wustl.edu	37	11	104874011	104874011	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBASH3B	84959	genome.wustl.edu	37	11	122653760	122653760	+	Splice_Site	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PGAM5	192111	genome.wustl.edu	37	12	133294335	133294335	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UPF3A	65110	genome.wustl.edu	37	13	115057211	115057211	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RPS6KL1	83694	genome.wustl.edu	37	14	75376484	75376484	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAG2	3714	genome.wustl.edu	37	14	105621923	105621923	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NDE1	54820	genome.wustl.edu	37	16	15788046	15788046	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
INO80E	283899	genome.wustl.edu	37	16	30016653	30016653	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF646	9726	genome.wustl.edu	37	16	31087658	31087658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
CHD3	1107	genome.wustl.edu	37	17	7798765	7798765	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
LHX1	3975	genome.wustl.edu	37	17	35300395	35300395	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
RNF43	54894	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DCC	1630	genome.wustl.edu	37	18	50994330	50994330	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SUGP2	10147	genome.wustl.edu	37	19	19136394	19136394	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
ZNF536	9745	genome.wustl.edu	37	19	30934859	30934859	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
NLRP9	338321	genome.wustl.edu	37	19	56249722	56249722	+	Frame_Shift_Del	DEL	A	A	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
JAG1	182	genome.wustl.edu	37	20	10630969	10630969	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
UBASH3A	53347	genome.wustl.edu	37	21	43836609	43836609	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PWP2	5822	genome.wustl.edu	37	21	45535623	45535623	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PFKL	5211	genome.wustl.edu	37	21	45746706	45746706	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SEZ6L	23544	genome.wustl.edu	37	22	26771573	26771573	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
H1F0	3005	genome.wustl.edu	37	22	38201689	38201691	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	GCG	GCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
DDX17	10521	genome.wustl.edu	37	22	38895455	38895455	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SHOX	6473	genome.wustl.edu	37	X	605215	605215	+	Frame_Shift_Del	DEL	C	C	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
FANCB	2187	genome.wustl.edu	37	X	14883337	14883337	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PTCHD1	139411	genome.wustl.edu	37	X	23398097	23398098	+	Frame_Shift_Ins	INS	-	-	A			TCGA-D1-A17D-01	TCGA-D1-A17D-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
SPANXC	64663	genome.wustl.edu	37	X	140335820	140335820	+	Frame_Shift_Del	DEL	T	T	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
PLXNB3	5365	genome.wustl.edu	37	X	153042691	153042691	+	Frame_Shift_Del	DEL	G	G	-			TCGA-D1-A17D-01	TCGA-D1-A17D-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx
