| GDAC_clinicalDataPicker1 stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/STAD/1126817/0.GDAC_clinicalDataMerger.Finished/STAD.clin.merged.txt |
| GDAC_clinicalDataPicker1 selectFile | file:/xchip/cga/reference/clinical/2012_05_03/stage3_params_clin_stad.tsv |
| GDAC_clinicalDataPicker1 nodeColumn | 1 |
| GDAC_clinicalDataPicker1 outPrefix | STAD |
| Execution Times: | |
| Submitted: | 13:43:39 07-05-12 |
| Completed: | |
| Elapsed: | 00 hrs 01 mins 02 secs |
step 1. GDAC_clinicalDataPicker [id: 85645] Picks out the clinical paramters of interest
urn:lsid:broadinstitute.org:cancer.genome.analysis:00312:26
| stage2File | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataMerger/STAD/1126817/0.GDAC_clinicalDataMerger.Finished/STAD.clin.merged.txt |
| selectFile | file:/xchip/cga/reference/clinical/2012_05_03/stage3_params_clin_stad.tsv |
| nodeColumn | 1 |
| outPrefix | STAD |
| Output Files: | |
| STAD.clin.merged.picked.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 13:43:40 07-05-12 |
| Completed: | 13:44:17 07-05-12 |
| Elapsed: | 00 hrs 00 mins 36 secs |
step 2. GDAC_clinicalDataPickerReport [id: 85646] Clinical data report
urn:lsid:broadinstitute.org:cancer.genome.analysis:00330:44
| picked | STAD.clin.merged.picked.txt |
| Execution Times: | |
| Submitted: | 13:43:40 07-05-12 |
| Completed: | 13:44:41 07-05-12 |
| Elapsed: | 00 hrs 01 mins 01 secs |