Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADCK5	203054	genome.wustl.edu	37	8	145603114	145603114	+	Missense_Mutation	SNP	A	A	C	rs6599528	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145603114	145603114	A	C	SNP	ADCK5	NM_174922	human	genbank	57_37b	+1	validated	missense	c.51	p.R17S	0.009	NULL	superfamily_Kinase_like,HMMPfam_ABC1	-		
ADD2	119	genome.wustl.edu	37	2	70906010	70906010	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	70906010	70906010	C	T	SNP	ADD2	NM_001617	human	genbank	57_37b	-1	reviewed	silent	c.1209	p.T403	0.010	NULL	superfamily_AraD-like aldolase/epimerase,HMMPfam_Aldolase_II	-	no_errors	
AGT	183	genome.wustl.edu	37	1	230846340	230846340	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	230846340	230846340	T	A	SNP	AGT	NM_000029	human	genbank	57_37b	-1	reviewed	missense	c.257	p.D86V	0.009	superfamily_Serpins	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors	
ALDH9A1	223	genome.wustl.edu	37	1	165652328	165652328	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	165652328	165652328	G	A	SNP	ALDH9A1	NM_000696	human	genbank	57_37b	-1	reviewed	missense	c.347	p.A116V	0.999	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors	
ALPK2	115701	genome.wustl.edu	37	18	56182234	56182234	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	56182234	56182234	T	C	SNP	ALPK2	NM_052947	human	genbank	57_37b	-1	validated	missense	c.6020	p.E2007G	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00811,HMMPfam_Alpha_kinase	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00811,HMMPfam_Alpha_kinase	-	no_errors	
ALS2CL	259173	genome.wustl.edu	37	3	46716125	46716125	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	46716125	46716125	T	C	SNP	ALS2CL	NM_147129	human	genbank	57_37b	-1	validated	missense	c.2360	p.Y787C	1.000	superfamily_VPS9 domain (Pfam 02204)	superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain,HMMSmart_SM00698,HMMPfam_MORN,superfamily_VPS9 domain (Pfam 02204),HMMPfam_VPS9	-	no_errors	
APLF	200558	genome.wustl.edu	37	2	68740326	68740326	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	68740326	68740326	A	T	SNP	APLF	NM_173545	human	genbank	57_37b	+1	validated	silent	c.456	p.I152	0.002	NULL	superfamily_SMAD_FHA,HMMPfam_zf-CCHH	-	no_errors	
ASB18	401036	genome.wustl.edu	37	2	237150049	237150049	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	237150049	237150049	C	T	SNP	ASB18	ENST00000330842	human	ensembl	57_37b	-1	known	missense	c.115	p.A39T	0.012	superfamily_ANK	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_SOCS_box	-	no_errors	
ASXL2	55252	genome.wustl.edu	37	2	25967090	25967090	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	25967090	25967090	C	A	SNP	ASXL2	NM_018263	human	genbank	57_37b	-1	validated	nonsense	c.2116	p.E706*	0.843	NULL	NULL	-	no_errors	
ATP8A1	10396	genome.wustl.edu	37	4	42425633	42425633	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	42425633	42425633	C	T	SNP	ATP8A1	NM_006095	human	genbank	57_37b	-1	reviewed	splice_site	c.3212+1	e34+1	1.000	-	-	-	no_errors	
B4GALT3	8703	genome.wustl.edu	37	1	161144898	161144899	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	161144898	161144899	-	T	INS	B4GALT3	NM_003779	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.374_373	p.T125fs	1.000:0.995	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Galactosyl_T_2	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Galactosyl_T_2	-	no_errors	
BEST1	7439	genome.wustl.edu	37	11	61729922	61729922	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61729922	61729922	C	A	SNP	BEST1	NM_001139443	human	genbank	57_37b	+1	reviewed	silent	c.1116	p.A372	0.002	NULL	HMMPfam_Bestrophin	-	no_errors	
C12orf71	0	genome.wustl.edu	37	12	27234161	27234161	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	27234161	27234161	G	C	SNP	C12orf71	NM_001080406	human	genbank	57_37b	-1	inferred	missense	c.756	p.H252Q	0.008	NULL	NULL	-	no_errors	
C15orf63	25764	genome.wustl.edu	37	15	44093968	44093968	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	44093968	44093968	C	A	SNP	C15orf63	NM_016400	human	genbank	57_37b	+1	provisional	silent	c.354	p.G118	1.000	NULL	NULL	-	no_errors	
CALCOCO1	57658	genome.wustl.edu	37	12	54105718	54105718	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	54105718	54105718	G	A	SNP	CALCOCO1	NR_026554	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.001	-	-	-	no_errors	
CARD6	84674	genome.wustl.edu	37	5	40854020	40854020	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	40854020	40854020	A	T	SNP	CARD6	NM_032587	human	genbank	57_37b	+1	reviewed	silent	c.2586	p.A862	0.000	NULL	superfamily_DEATH_like,HMMPfam_CARD	-	no_errors	
CCDC146	57639	genome.wustl.edu	37	7	76866317	76866317	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	76866317	76866317	G	C	SNP	CCDC146	NM_020879	human	genbank	57_37b	+1	validated	missense	c.210	p.K70N	1.000	NULL	NULL	-	no_errors	
CDC20B	166979	genome.wustl.edu	37	5	54442678	54442678	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54442678	54442678	C	G	SNP	CDC20B	NM_152623	human	genbank	57_37b	-1	validated	missense	c.133	p.D45H	0.001	superfamily_WD40_like	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
CDH20	28316	genome.wustl.edu	37	18	59195238	59195238	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	59195238	59195238	G	T	SNP	CDH20	NM_031891	human	genbank	57_37b	+1	reviewed	missense	c.1056	p.K352N	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CEP152	22995	genome.wustl.edu	37	15	49054845	49054845	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	49054845	49054845	G	C	SNP	CEP152	NM_014985	human	genbank	57_37b	-1	provisional	missense	c.2305	p.L769V	0.998	NULL	NULL	-	no_errors	
CFH	3075	genome.wustl.edu	37	1	196643085	196643085	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	196643085	196643085	A	T	SNP	CFH	NM_000186	human	genbank	57_37b	+1	reviewed	missense	c.343	p.N115Y	0.579	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
CGNL1	84952	genome.wustl.edu	37	15	57730935	57730935	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	57730935	57730935	A	-	DEL	CGNL1	NM_032866	human	genbank	57_37b	+1	validated	frame_shift_del	c.738	p.E247fs	0.000	NULL	HMMPfam_Myosin_tail_1	(deletion:cds_exon[57730198,57731799])	no_errors	
CNTNAP3	79937	genome.wustl.edu	37	9	39100104	39100104	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	39100104	39100104	C	T	SNP	CNTNAP3	NM_033655	human	genbank	57_37b	-1	reviewed	silent	c.2799	p.R933	0.246	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00181,HMMPfam_EGF,superfamily_Fibrinogen C-terminal domain-like,PatternScan_GLYCO_HORMONE_BETA_1	-	no_errors	
COG1	9382	genome.wustl.edu	37	17	71201755	71201755	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	71201755	71201755	C	A	SNP	COG1	NM_018714	human	genbank	57_37b	+1	reviewed	missense	c.2446	p.L816I	1.000	NULL	HMMPfam_Vps51	-	no_errors	
CPS1	1373	genome.wustl.edu	37	2	211525277	211525277	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	211525277	211525277	C	A	SNP	CPS1	NM_001122633	human	genbank	57_37b	+1	reviewed	missense	c.3843	p.F1281L	1.000	superfamily_Glutathione synthetase ATP-binding domain-like	superfamily_Carbamoyl phosphate synthetase small subunit N-terminal domain,HMMPfam_CPSase_sm_chain,superfamily_Class I glutamine amidotransferase-like,HMMPfam_GATase,superfamily_PreATP-grasp domain,HMMPfam_CPSase_L_chain,HMMPfam_CPSase_L_D2,superfamily_Glutathione synthetase ATP-binding domain-like,PatternScan_CPSASE_1,PatternScan_CPSASE_2,superfamily_Carbamoyl phosphate synthetase large subunit connection domain,HMMPfam_CPSase_L_D3,superfamily_Methylglyoxal synthase-like,HMMPfam_MGS	-	no_errors	
CSMD1	64478	genome.wustl.edu	37	8	3046501	3046501	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3046501	3046501	C	G	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	missense	c.5434	p.G1812R	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
DISC1	27185	genome.wustl.edu	37	1	232144788	232144788	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	232144788	232144788	A	C	SNP	DISC1	NM_018662	human	genbank	57_37b	+1	reviewed	missense	c.2300	p.Q767P	0.654	NULL	superfamily_Prefoldin	-	no_errors	
DKFZP779L1853	643162	genome.wustl.edu	37	12	48594882	48594882	+	RNA	SNP	T	T	G	rs79054759	byCluster;byFrequency;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	48594882	48594882	T	G	SNP	DKFZP779L1853	XR_041777	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.000	-	-	-		
DNAJC14	85406	genome.wustl.edu	37	12	56221251	56221251	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56221251	56221251	A	G	SNP	DNAJC14	NM_032364	human	genbank	57_37b	-1	validated	missense	c.1192	p.W398R	1.000	NULL	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ	-	no_errors	
DRD2	1813	genome.wustl.edu	37	11	113295308	113295308	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	113295308	113295308	G	T	SNP	DRD2	NM_000795	human	genbank	57_37b	-1	reviewed	missense	c.66	p.F22L	1.000	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
ELN	2006	genome.wustl.edu	37	7	73457331	73457331	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	73457331	73457331	G	A	SNP	ELN	NM_000501	human	genbank	57_37b	+1	reviewed	missense	c.343	p.V115I	0.000	NULL	PatternScan_ENDONUCLEASE_III_2,PatternScan_HEXAPEP_TRANSFERASES	-	no_errors	
EMR3	84658	genome.wustl.edu	37	19	14749046	14749046	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14749046	14749046	G	A	SNP	EMR3	NM_032571	human	genbank	57_37b	-1	reviewed	missense	c.1355	p.T452I	0.295	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_2	HMMSmart_SM00181,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors	
ENSG00000186445	0	genome.wustl.edu	37	14	20181309	20181309	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	20181309	20181309	C	A	SNP	ENSG00000186445	ENST00000334072	human	ensembl	57_37b	-1	known	missense	c.767	p.C256F	1.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
ENSG00000206193	0	genome.wustl.edu	37	15	25327738	25327738	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	25327738	25327738	G	C	SNP	ENSG00000206193	ENST00000383025	human	ensembl	57_37b	+1	known	missense	c.70	p.G24R	0.003	NULL	NULL	-	no_errors	
ENSG00000246080	0	genome.wustl.edu	37	2	234775489	234775489	+	RNA	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234775489	234775489	T	A	SNP	ENSG00000246080	ENST00000499739	human	ensembl	57_37b	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	
ENSG00000246938	0	genome.wustl.edu	37	2	20453495	20453495	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	20453495	20453495	T	C	SNP	ENSG00000246938	ENST00000502229	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
ERCC6	2074	genome.wustl.edu	37	10	50679156	50679156	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	50679156	50679156	T	C	SNP	ERCC6	NM_000124	human	genbank	57_37b	-1	reviewed	missense	c.2935	p.K979E	1.000	superfamily_SSF52540	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C	-	no_errors	
FAM114A2	10827	genome.wustl.edu	37	5	153413878	153413878	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	153413878	153413878	C	A	SNP	FAM114A2	NM_018691	human	genbank	57_37b	-1	validated	missense	c.270	p.K90N	1.000	HMMPfam_DUF719	HMMPfam_DUF719	-	no_errors	
FBN1	2200	genome.wustl.edu	37	15	48729188	48729188	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48729188	48729188	C	A	SNP	FBN1	NM_000138	human	genbank	57_37b	-1	reviewed	missense	c.6466	p.G2156C	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMPfam_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2	HMMSmart_SM00181,HMMPfam_EGF,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Concanavalin A-like lectins/glucanases,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Growth factor receptor domain	-	no_errors	
FBXW4	6468	genome.wustl.edu	37	10	103427732	103427732	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	103427732	103427732	C	T	SNP	FBXW4	NM_022039	human	genbank	57_37b	-1	reviewed	nonsense	c.681	p.W227*	1.000	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	PatternScan_WD_REPEATS_1,superfamily_SSF81383,HMMPfam_F-box,HMMSmart_FBOX,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
FGD5	152273	genome.wustl.edu	37	3	14861793	14861793	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	14861793	14861793	C	T	SNP	FGD5	NM_152536	human	genbank	57_37b	+1	validated	silent	c.1215	p.A405	0.001	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger,PatternScan_C_TYPE_LECTIN_1	-	no_errors	
FLNB	2317	genome.wustl.edu	37	3	58094278	58094278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	58094278	58094278	C	T	SNP	FLNB	NM_001457	human	genbank	57_37b	+1	reviewed	missense	c.2035	p.P679S	1.000	HMMPfam_Filamin,superfamily_Ig_E-set,HMMSmart_IG_FLMN	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Ig_E-set,HMMPfam_Filamin,HMMSmart_IG_FLMN	-	no_errors	
FLT3	2322	genome.wustl.edu	37	13	28578204	28578204	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	28578204	28578204	C	A	SNP	FLT3	NM_004119	human	genbank	57_37b	-1	reviewed	missense	c.2967	p.Q989H	0.000	NULL	superfamily_SSF48726,HMMPfam_ig,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
FREM1	158326	genome.wustl.edu	37	9	14769772	14769772	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	14769772	14769772	G	A	SNP	FREM1	NM_144966	human	genbank	57_37b	-1	validated	silent	c.5154	p.T1718	0.001	NULL	superfamily_Cadherin-like,PatternScan_SPASE_I_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	no_errors	
FZD6	8323	genome.wustl.edu	37	8	104337129	104337129	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	104337129	104337129	G	C	SNP	FZD6	NM_003506	human	genbank	57_37b	+1	reviewed	missense	c.795	p.E265D	0.991	HMMPfam_Frizzled	HMMPfam_Fz,superfamily_Frizzled_Cys-rich,HMMSmart_FRI,HMMPfam_Frizzled	-	no_errors	
GABRQ	55879	genome.wustl.edu	37	X	151815563	151815563	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	151815563	151815563	A	T	SNP	GABRQ	NM_018558	human	genbank	57_37b	+1	reviewed	missense	c.461	p.H154L	1.000	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors	
GRAP2	9402	genome.wustl.edu	37	22	40366922	40366922	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	40366922	40366922	C	G	SNP	GRAP2	NM_004810	human	genbank	57_37b	+1	reviewed	missense	c.827	p.A276G	0.997	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors	
HMCN1	83872	genome.wustl.edu	37	1	185902893	185902893	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	185902893	185902893	T	A	SNP	HMCN1	NM_031935	human	genbank	57_37b	+1	reviewed	missense	c.1765	p.Y589N	1.000	HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_vWA-like,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00406,PatternScan_CECROPIN,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,PatternScan_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,PatternScan_EGF_2	-	no_errors	
HNRNPF	3185	genome.wustl.edu	37	10	43882166	43882166	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	43882166	43882166	G	-	DEL	HNRNPF	NM_001098204	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.1167	p.Y389fs	0.995	NULL	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1,HMMPfam_zf-RNPHF	(deletion:cds_exon[43882085,43883332])	no_errors	
HSF2	3298	genome.wustl.edu	37	6	122741312	122741325	+	Frame_Shift_Del	DEL	AGAAGAACCTGTTT	AGAAGAACCTGTTT	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	AGAAGAACCTGTTT	AGAAGAACCTGTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	122741312	122741325	AGAAGAACCTGTTT	-	DEL	HSF2	NM_004506	human	genbank	57_37b	+1	validated	frame_shift_del	c.626_639	p.K209fs	1.000:1.000:1.000:1.000:1.000:1.000:0.995:0.875:0.804:0.801:0.792:0.993:1.000:1.000	NULL	superfamily_SSF46785,HMMSmart_HSF,HMMPfam_HSF_DNA-bind,PatternScan_HSF_DOMAIN,HMMPfam_Vert_HS_TF	(deletion:cds_exon[122741280,122741367])	no_errors	
INTS3	65123	genome.wustl.edu	37	1	153735214	153735214	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153735214	153735214	G	A	SNP	INTS3	NM_023015	human	genbank	57_37b	+1	validated	silent	c.1527	p.E509	0.997	NULL	HMMPfam_DUF2356	-	no_errors	
IPO9	55705	genome.wustl.edu	37	1	201822199	201822199	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	201822199	201822199	A	G	SNP	IPO9	NM_018085	human	genbank	57_37b	+1	validated	missense	c.664	p.I222V	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_IBN_N	-	no_errors	
KIAA0947	23379	genome.wustl.edu	37	5	5466609	5466611	+	In_Frame_Del	DEL	AAA	AAA	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	AAA	AAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	5466609	5466611	AAA	-	DEL	KIAA0947	NM_015325	human	genbank	57_37b	+1	validated	in_frame_del	c.6055_6057	p.K2019in_frame_del	0.993:0.998:0.997	NULL	NULL	(deletion:cds_exon[5466447,5466615])	no_errors	
KIAA1432	57589	genome.wustl.edu	37	9	5763843	5763843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	5763843	5763843	C	T	SNP	KIAA1432	NM_020829	human	genbank	57_37b	+1	validated	missense	c.2579	p.A860V	1.000	HMMPfam_RIC1	superfamily_Amine_DH_B_like,HMMPfam_RIC1	-	no_errors	
KLHL24	54800	genome.wustl.edu	37	3	183382765	183382765	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183382765	183382765	A	G	SNP	KLHL24	NM_017644	human	genbank	57_37b	+1	validated	missense	c.1162	p.I388V	1.000	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	-	no_errors	
KLK3	354	genome.wustl.edu	37	19	51361847	51361847	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51361847	51361847	G	A	SNP	KLK3	NM_001648	human	genbank	57_37b	+1	reviewed	missense	c.626	p.C209Y	0.170	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_SER	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
LAMA3	3909	genome.wustl.edu	37	18	21364028	21364028	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	21364028	21364028	G	A	SNP	LAMA3	NM_198129	human	genbank	57_37b	+1	reviewed	missense	c.1510	p.D504N	1.000	HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,HMMSmart_SM00181	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMSmart_SM00281,HMMPfam_Laminin_B,PatternScan_EGF_2,HMMPfam_Laminin_I,HMMPfam_Laminin_II,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_CHAPERONINS_CPN60	-	no_errors	
LIN9	286826	genome.wustl.edu	37	1	226474154	226474154	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	226474154	226474154	A	C	SNP	LIN9	NM_173083	human	genbank	57_37b	-1	provisional	missense	c.452	p.L151R	0.999	HMMPfam_DIRP	HMMPfam_DIRP	-	no_errors	
LOC100128139	0	genome.wustl.edu	37	19	22715633	22715633	+	Silent	SNP	A	C	C	rs2304139	byCluster;byFrequency;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	22715633	22715633	A	C	SNP	LOC100128139	XM_001719779	human	genbank	57_37b	+1	model	silent	c.265	p.R89	0.008	NULL	NULL	-		
LOC100289202	0	genome.wustl.edu	37	12	58022574	58022574	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	58022574	58022574	C	T	SNP	LOC100289202	XM_002343172	human	genbank	57_37b	+1	model	missense	c.649	p.H217Y	1.000	NULL	NULL	-	no_errors	
LOC400986	400986	genome.wustl.edu	37	2	96521618	96521618	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96521618	96521618	A	G	SNP	LOC400986	XM_001717763	human	genbank	57_37b	-1	model	missense	c.3347	p.M1116T	0.461	NULL	NULL	-	no_errors	
LOC646214	646214	genome.wustl.edu	37	15	21935187	21935187	+	RNA	SNP	T	T	G	rs61581696	byCluster	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	21935187	21935187	T	G	SNP	LOC646214	NR_027053	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.030	-	-	-		
LRFN2	57497	genome.wustl.edu	37	6	40400435	40400435	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	40400435	40400435	C	T	SNP	LRFN2	NM_020737	human	genbank	57_37b	-1	provisional	missense	c.418	p.A140T	0.843	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors	
LRIT1	26103	genome.wustl.edu	37	10	85992189	85992189	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	85992189	85992189	T	C	SNP	LRIT1	NM_015613	human	genbank	57_37b	-1	validated	missense	c.1366	p.T456A	0.800	HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like	HMMSmart_LRRNT,superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like	-	no_errors	
LY9	4063	genome.wustl.edu	37	1	160769678	160769678	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160769678	160769678	T	C	SNP	LY9	NM_002348	human	genbank	57_37b	+1	validated	missense	c.260	p.L87P	0.001	HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00409,superfamily_Immunoglobulin,PatternScan_AA_TRNA_LIGASE_I	-	no_errors	
MAP2	4133	genome.wustl.edu	37	2	210559236	210559236	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	210559236	210559236	A	T	SNP	MAP2	NM_002374	human	genbank	57_37b	+1	reviewed	missense	c.2342	p.Q781L	0.968	HMMPfam_MAP2_projctn	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors	
MINA	84864	genome.wustl.edu	37	3	97664033	97664050	+	In_Frame_Del	DEL	CTACTTGAATTAAACATT	CTACTTGAATTAAACATT	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	CTACTTGAATTAAACATT	CTACTTGAATTAAACATT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	97664033	97664050	CTACTTGAATTAAACATT	-	DEL	MINA	NM_001042533	human	genbank	57_37b	-1	validated	in_frame_del	c.1393_1376	p.ECLIQV459in_frame_del	0.310:0.315:0.995:1.000:1.000:1.000:1.000:0.974:0.974:0.705:0.645:0.992:0.993:0.991:1.000:1.000:1.000:1.000	NULL	superfamily_Clavaminate synthase-like,HMMPfam_Cupin_4	(deletion:cds_exon[97664028,97664186])	no_errors	
MORC1	27136	genome.wustl.edu	37	3	108724000	108724000	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	108724000	108724000	A	C	SNP	MORC1	NM_014429	human	genbank	57_37b	-1	reviewed	missense	c.1930	p.S644A	0.004	NULL	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_HATPase_c,HMMPfam_zf-CW	-	no_errors	
MYH6	4624	genome.wustl.edu	37	14	23873939	23873939	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23873939	23873939	T	C	SNP	MYH6	NM_002471	human	genbank	57_37b	-1	validated	missense	c.623	p.D208G	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
NBEAL2	23218	genome.wustl.edu	37	3	47041682	47041682	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47041682	47041682	G	C	SNP	NBEAL2	NM_015175	human	genbank	57_37b	+1	validated	missense	c.4093	p.V1365L	0.035	NULL	superfamily_ARM repeat,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
NCRNA00171	80862	genome.wustl.edu	37	6	30002818	30002818	+	RNA	SNP	T	T	C	rs115869495	byCluster;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30002818	30002818	T	C	SNP	NCRNA00171	NR_026751	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.023	-	-	-		
NECAB1	64168	genome.wustl.edu	37	8	91929817	91929817	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	91929817	91929817	G	A	SNP	NECAB1	NM_022351	human	genbank	57_37b	+1	validated	missense	c.455	p.C152Y	1.000	NULL	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,superfamily_Dimeric alpha beta barrel,HMMPfam_ABM	-	no_errors	
NF1	4763	genome.wustl.edu	37	17	29684294	29684321	+	Frame_Shift_Del	DEL	TGGTAAAATATACCACAGATGAGTTTGA	TGGTAAAATATACCACAGATGAGTTTGA	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	TGGTAAAATATACCACAGATGAGTTTGA	TGGTAAAATATACCACAGATGAGTTTGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	29684294	29684321	TGGTAAAATATACCACAGATGAGTTTGA	-	DEL	NF1	NM_001042492	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.7877_7904	p.V2627fs	0.999:1.000:1.000:1.000:0.953:1.000:1.000:1.000:1.000:1.000:0.981:1.000:1.000:1.000:1.000:1.000:0.712:1.000:1.000:1.000:1.000:1.000:0.997:1.000:1.000:1.000:1.000:1.000	NULL	HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1,HMMSmart_SM00516	(deletion:cds_exon[29684287,29684387])	no_errors	
NGEF	25791	genome.wustl.edu	37	2	233757679	233757679	+	Nonsense_Mutation	SNP	G	G	A	rs748002	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	233757679	233757679	G	A	SNP	NGEF	ENST00000420650	human	ensembl	57_37b	-1	known	nonsense	c.448	p.R150*	0.077	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF	-		
NLRP10	338322	genome.wustl.edu	37	11	7982712	7982712	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	7982712	7982712	A	T	SNP	NLRP10	NM_176821	human	genbank	57_37b	-1	reviewed	silent	c.447	p.S149	0.032	superfamily_SSF52540	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,superfamily_SSF52540,HMMPfam_NACHT	-	no_errors	
NRG3	10718	genome.wustl.edu	37	10	84744963	84744963	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	84744963	84744963	G	C	SNP	NRG3	NM_001010848	human	genbank	57_37b	+1	reviewed	missense	c.1693	p.G565R	1.000	NULL	superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_Neuregulin	-	no_errors	
NRXN2	9379	genome.wustl.edu	37	11	64417968	64417968	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64417968	64417968	G	C	SNP	NRXN2	NM_015080	human	genbank	57_37b	-1	reviewed	missense	c.3061	p.R1021G	1.000	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00294	-	no_errors	
NRXN3	9369	genome.wustl.edu	37	14	79111656	79111656	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	79111656	79111656	G	T	SNP	NRXN3	ENST00000330071	human	ensembl	57_37b	+1	known	missense	c.234	p.L78F	1.000	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,superfamily_EGF/Laminin	-	no_errors	
NYNRIN	0	genome.wustl.edu	37	14	24877941	24877941	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24877941	24877941	A	T	SNP	NYNRIN	NM_025081	human	genbank	57_37b	+1	validated	missense	c.941	p.N314I	0.002	NULL	superfamily_DNA/RNA polymerases,superfamily_Ribonuclease H-like	-	no_errors	
OR10A2	341276	genome.wustl.edu	37	11	6891464	6891464	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6891464	6891464	A	C	SNP	OR10A2	NM_001004460	human	genbank	57_37b	+1	provisional	missense	c.479	p.K160T	0.023	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR12D3	81797	genome.wustl.edu	37	6	29342676	29342676	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29342676	29342676	T	A	SNP	OR12D3	NM_030959	human	genbank	57_37b	-1	provisional	missense	c.389	p.Y130F	0.981	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2G3	81469	genome.wustl.edu	37	1	247768952	247768952	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	247768952	247768952	G	T	SNP	OR2G3	NM_001001914	human	genbank	57_37b	+1	provisional	missense	c.65	p.R22L	0.000	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2T10	127069	genome.wustl.edu	37	1	248756770	248756770	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248756770	248756770	C	T	SNP	OR2T10	NM_001004693	human	genbank	57_37b	-1	provisional	silent	c.300	p.Q100	0.294	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR6C6	283365	genome.wustl.edu	37	12	55688554	55688554	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	55688554	55688554	A	T	SNP	OR6C6	NM_001005493	human	genbank	57_37b	-1	provisional	missense	c.463	p.F155I	0.001	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OVCH1	341350	genome.wustl.edu	37	12	29629184	29629184	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	29629184	29629184	C	G	SNP	OVCH1	NM_183378	human	genbank	57_37b	-1	validated	missense	c.1426	p.D476H	0.203	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors	
PADI3	51702	genome.wustl.edu	37	1	17606863	17606863	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	17606863	17606863	C	T	SNP	PADI3	NM_016233	human	genbank	57_37b	+1	reviewed	missense	c.1574	p.T525I	0.825	HMMPfam_PAD,superfamily_SSF55909	HMMPfam_PAD_N,superfamily_Cupredoxin,HMMPfam_PAD_M,superfamily_PAD_central,HMMPfam_PAD,superfamily_SSF55909	-	no_errors	
PAR5	0	genome.wustl.edu	37	15	25230562	25230562	+	RNA	SNP	G	G	A	rs1991275	byCluster	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	25230562	25230562	G	A	SNP	PAR5	NR_022008	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.000	-	-	-		
PCDHA11	56138	genome.wustl.edu	37	5	140248908	140248908	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140248908	140248908	C	A	SNP	PCDHA11	NM_018902	human	genbank	57_37b	+1	reviewed	missense	c.220	p.L74I	0.993	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHA8	56140	genome.wustl.edu	37	5	140222344	140222344	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140222344	140222344	C	T	SNP	PCDHA8	NM_018911	human	genbank	57_37b	+1	reviewed	nonsense	c.1438	p.R480*	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHB11	56125	genome.wustl.edu	37	5	140580947	140580947	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140580947	140580947	A	G	SNP	PCDHB11	NM_018931	human	genbank	57_37b	+1	reviewed	missense	c.1600	p.T534A	0.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGA12	26025	genome.wustl.edu	37	5	140812092	140812092	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140812092	140812092	C	A	SNP	PCDHGA12	NM_003735	human	genbank	57_37b	+1	reviewed	missense	c.1766	p.T589N	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PLA1A	51365	genome.wustl.edu	37	3	119344029	119344041	+	Frame_Shift_Del	DEL	CGAGGTTACCTTC	CGAGGTTACCTTC	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	CGAGGTTACCTTC	CGAGGTTACCTTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119344029	119344041	CGAGGTTACCTTC	-	DEL	PLA1A	NM_015900	human	genbank	57_37b	+1	validated	frame_shift_del	c.1071_1083	p.E358fs	0.007:0.001:0.002:0.000:0.022:0.654:0.669:0.678:0.643:0.594:0.949:0.983:0.981	NULL	superfamily_alpha/beta-Hydrolases,HMMPfam_Lipase,PatternScan_LIPASE_SER	(deletion:cds_exon[119343971,119344079])	no_errors	
PNPO	55163	genome.wustl.edu	37	17	46022006	46022006	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	46022006	46022006	G	T	SNP	PNPO	NM_018129	human	genbank	57_37b	+1	reviewed	missense	c.288	p.M96I	1.000	superfamily_FMN_binding,HMMPfam_Pyridox_oxidase	superfamily_FMN_binding,HMMPfam_Pyridox_oxidase,HMMPfam_PNPOx_C,PatternScan_PYRIDOX_OXIDASE	-	no_errors	
PPM1D	8493	genome.wustl.edu	37	17	58734121	58734121	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	58734121	58734121	G	C	SNP	PPM1D	NM_003620	human	genbank	57_37b	+1	reviewed	silent	c.1179	p.L393	0.990	NULL	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C,PatternScan_PP2C	-	no_errors	
PPP2R3B	28227	genome.wustl.edu	37	X	299591	299591	+	Silent	SNP	A	G	G	rs2738373	byCluster;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	299591	299591	A	G	SNP	PPP2R3B	NM_013239	human	genbank	57_37b	-1	reviewed	silent	c.1392	p.A464	0.968	superfamily_EF-hand	superfamily_EF-hand,PatternScan_EF_HAND_1	-		
PRAME	23532	genome.wustl.edu	37	22	22899234	22899234	+	Missense_Mutation	SNP	A	A	G	rs2266988	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	22899234	22899234	A	G	SNP	PRAME	NM_006115	human	genbank	57_37b	-1	reviewed	missense	c.19	p.W7R	0.411	NULL	superfamily_RNI-like	-		
PTPRE	5791	genome.wustl.edu	37	10	129871639	129871639	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	129871639	129871639	G	A	SNP	PTPRE	NM_006504	human	genbank	57_37b	+1	reviewed	silent	c.1503	p.G501	0.774	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
PXMP4	11264	genome.wustl.edu	37	20	32302531	32302531	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	32302531	32302531	T	C	SNP	PXMP4	NM_007238	human	genbank	57_37b	-1	validated	missense	c.125	p.K42R	1.000	HMMPfam_Pmp24	HMMPfam_Pmp24	-	no_errors	
REL	5966	genome.wustl.edu	37	2	61145426	61145426	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	61145426	61145426	G	A	SNP	REL	NM_002908	human	genbank	57_37b	+1	validated	silent	c.636	p.Q212	1.000	superfamily_Ig_E-set,HMMSmart_IPT,HMMPfam_TIG	superfamily_P53_like_DNA_bnd,HMMPfam_RHD,PatternScan_REL_1,superfamily_Ig_E-set,HMMSmart_IPT,HMMPfam_TIG	-	no_errors	
RGPD2	729857	genome.wustl.edu	37	2	88082418	88082418	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	88082418	88082418	C	A	SNP	RGPD2	NM_001078170	human	genbank	57_37b	-1	validated	missense	c.1896	p.K632N	1.000	superfamily_SSF50729,HMMSmart_RanBD,HMMPfam_Ran_BP1	superfamily_SSF50729,HMMSmart_RanBD,HMMPfam_Ran_BP1,HMMPfam_GRIP,HMMSmart_Grip	-	no_errors	
SAMD7	344658	genome.wustl.edu	37	3	169644854	169644854	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169644854	169644854	T	C	SNP	SAMD7	NM_182610	human	genbank	57_37b	+1	provisional	silent	c.804	p.T268	0.000	NULL	superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors	
SAMD8	142891	genome.wustl.edu	37	10	76928307	76928307	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	76928307	76928307	T	G	SNP	SAMD8	NM_144660	human	genbank	57_37b	+1	provisional	missense	c.683	p.L228R	1.000	NULL	superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors	
SAMD9L	219285	genome.wustl.edu	37	7	92763853	92763853	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	92763853	92763853	T	C	SNP	SAMD9L	NM_152703	human	genbank	57_37b	-1	validated	missense	c.1432	p.T478A	0.000	NULL	superfamily_SAM/Pointed domain	-	no_errors	
SCN10A	6336	genome.wustl.edu	37	3	38753808	38753808	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38753808	38753808	G	A	SNP	SCN10A	NM_006514	human	genbank	57_37b	-1	validated	silent	c.3933	p.I1311	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors	
SERPINE1	5054	genome.wustl.edu	37	7	100773837	100773837	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100773837	100773837	T	C	SNP	SERPINE1	NM_000602	human	genbank	57_37b	+1	reviewed	missense	c.407	p.F136S	1.000	HMMPfam_Serpin,superfamily_Prot_inh_serpin,HMMSmart_SERPIN	HMMPfam_Serpin,superfamily_Prot_inh_serpin,HMMSmart_SERPIN,PatternScan_SERPIN	-	no_errors	
SIGLEC11	114132	genome.wustl.edu	37	19	50463606	50463606	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50463606	50463606	A	C	SNP	SIGLEC11	NM_052884	human	genbank	57_37b	-1	validated	missense	c.533	p.V178G	0.000	superfamily_Immunoglobulin,HMMPfam_C2-set_2,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMPfam_C2-set_2,HMMPfam_I-set,HMMSmart_SM00408,HMMPfam_ig,PatternScan_IG_MHC	-	no_errors	
SLAMF7	57823	genome.wustl.edu	37	1	160722907	160722907	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160722907	160722907	C	G	SNP	SLAMF7	ENST00000359331	human	ensembl	57_37b	+1	known	missense	c.844	p.P282A	0.000	NULL	HMMPfam_V-set,superfamily_SSF48726	-	no_errors	
SNORD19B	0	genome.wustl.edu	37	3	52724803	52724803	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52724803	52724803	G	C	SNP	SNORD19B	NR_003687	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.000	-	-	-	no_errors	
SNX29	92017	genome.wustl.edu	37	16	12172727	12172727	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	12172727	12172727	A	C	SNP	SNX29	NM_001080530	human	genbank	57_37b	+1	provisional	missense	c.202	p.S68R	0.998	NULL	superfamily_PX domain,HMMSmart_SM00312,HMMPfam_PX	-	no_errors	
SORT1	6272	genome.wustl.edu	37	1	109878931	109878931	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109878931	109878931	T	C	SNP	SORT1	NM_002959	human	genbank	57_37b	-1	reviewed	silent	c.1302	p.G434	1.000	superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase,HMMSmart_SM00602	superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase,HMMSmart_SM00602,PatternScan_HEMOCYANIN_2	-	no_errors	
SPTA1	6708	genome.wustl.edu	37	1	158624423	158624423	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158624423	158624423	G	A	SNP	SPTA1	NM_003126	human	genbank	57_37b	-1	reviewed	missense	c.3014	p.T1005M	0.995	HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_EF-hand,HMMPfam_efhand_Ca_insen	-	no_errors	
SV2B	9899	genome.wustl.edu	37	15	91809865	91809865	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	91809865	91809865	T	A	SNP	SV2B	NM_014848	human	genbank	57_37b	+1	validated	missense	c.1062	p.S354R	0.892	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
SYT1	6857	genome.wustl.edu	37	12	79842793	79842793	+	Silent	SNP	G	G	A	rs56012845	byCluster	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	79842793	79842793	G	A	SNP	SYT1	NM_001135805	human	genbank	57_37b	+1	validated	silent	c.1158	p.A386	0.924	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-		
TG	7038	genome.wustl.edu	37	8	133919044	133919044	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	133919044	133919044	G	T	SNP	TG	NM_003235	human	genbank	57_37b	+1	reviewed	missense	c.3746	p.C1249F	0.255	NULL	superfamily_Thyroglobulin type-1 domain,HMMPfam_Thyroglobulin_1,PatternScan_THYROGLOBULIN_1_1,HMMSmart_SM00211,superfamily_TNF receptor-like,HMMPfam_GCC2_GCC3,HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases,PatternScan_CARBOXYLESTERASE_B_2	-	no_errors	
THAP1	55145	genome.wustl.edu	37	8	42693459	42693459	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	42693459	42693459	T	C	SNP	THAP1	NM_199003	human	genbank	57_37b	-1	reviewed	missense	c.92	p.H31R	0.005	NULL	HMMPfam_THAP	-	no_errors	
TMEM132A	54972	genome.wustl.edu	37	11	60697989	60697989	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	60697989	60697989	G	A	SNP	TMEM132A	NM_017870	human	genbank	57_37b	+1	reviewed	missense	c.874	p.V292M	1.000	NULL	NULL	-	no_errors	
TPM1	7168	genome.wustl.edu	37	15	63351850	63351850	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	63351850	63351850	G	C	SNP	TPM1	NM_000366	human	genbank	57_37b	+1	reviewed	missense	c.463	p.A155P	1.000	HMMPfam_Tropomyosin	HMMPfam_Tropomyosin,PatternScan_TROPOMYOSIN	-	no_errors	
TRIM46	80128	genome.wustl.edu	37	1	155150988	155150988	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155150988	155150988	C	-	DEL	TRIM46	NM_025058	human	genbank	57_37b	+1	validated	frame_shift_del	c.1184	p.L396fs	1.000	NULL	superfamily_RING/U-box,HMMPfam_zf-C3HC4,HMMSmart_SM00184,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain,HMMPfam_fn3,superfamily_Fibronectin type III	(deletion:cds_exon[155150968,155151089])	no_errors	
TRIM58	25893	genome.wustl.edu	37	1	248039569	248039569	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248039569	248039569	T	G	SNP	TRIM58	NM_015431	human	genbank	57_37b	+1	validated	missense	c.1239	p.I413M	0.611	HMMPfam_SPRY,HMMSmart_SPRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179396767	179396767	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179396767	179396767	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.96865	p.R32289W	1.000	NULL	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TXNRD3IT1	0	genome.wustl.edu	37	3	126291351	126291351	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	126291351	126291351	C	A	SNP	TXNRD3IT1	NM_001039783	human	genbank	57_37b	-1	provisional	silent	c.36	p.P12	0.176	NULL	PatternScan_TUBULIN_B_AUTOREG	-	no_errors	
USH2A	7399	genome.wustl.edu	37	1	215848460	215848460	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	215848460	215848460	C	A	SNP	USH2A	NM_206933	human	genbank	57_37b	-1	reviewed	missense	c.12793	p.G4265C	0.945	superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
VCAM1	7412	genome.wustl.edu	37	1	101200206	101200206	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	101200206	101200206	A	T	SNP	VCAM1	NM_001078	human	genbank	57_37b	+1	reviewed	missense	c.1941	p.K647N	0.033	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set,HMMPfam_ig,HMMSmart_SM00406	-	no_errors	
VWF	7450	genome.wustl.edu	37	12	6125930	6125930	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6125930	6125930	T	A	SNP	VWF	NM_000552	human	genbank	57_37b	-1	reviewed	missense	c.5160	p.K1720N	0.061	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_VWC,PatternScan_VWFC_1,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors	
ZMYND19	116225	genome.wustl.edu	37	9	140477613	140477613	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140477613	140477613	T	C	SNP	ZMYND19	NM_138462	human	genbank	57_37b	-1	validated	missense	c.362	p.E121G	1.000	NULL	PatternScan_ZF_MYND_1,HMMPfam_zf-MYND	-	no_errors	
ZNF280D	54816	genome.wustl.edu	37	15	56959161	56959161	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	56959161	56959161	T	A	SNP	ZNF280D	NM_017661	human	genbank	57_37b	-1	validated	silent	c.1569	p.G523	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZNF454	285676	genome.wustl.edu	37	5	178392207	178392207	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	178392207	178392207	G	A	SNP	ZNF454	NM_182594	human	genbank	57_37b	+1	provisional	missense	c.802	p.G268R	1.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF470	388566	genome.wustl.edu	37	19	57089279	57089279	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57089279	57089279	G	A	SNP	ZNF470	NM_001001668	human	genbank	57_37b	+1	validated	silent	c.1482	p.T494	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF534	147658	genome.wustl.edu	37	19	52942384	52942384	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52942384	52942384	G	T	SNP	ZNF534	NM_001143939	human	genbank	57_37b	+1	validated	missense	c.1710	p.K570N	0.248	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZSCAN10	84891	genome.wustl.edu	37	16	3142213	3142213	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08F-01	TCGA-A8-A08F-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3142213	3142213	C	A	SNP	ZSCAN10	NM_032805	human	genbank	57_37b	-1	provisional	missense	c.336	p.L112F	0.000	NULL	HMMPfam_SCAN,HMMSmart_SCAN,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
