Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCA13	154664	genome.wustl.edu	37	7	48311643	48311643	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	48311643	48311643	T	C	SNP	ABCA13	NM_152701	human	genbank	57_37b	+1	reviewed	silent	c.2380	p.L794	0.123	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	-	no_errors	
ABCA7	10347	genome.wustl.edu	37	19	1062286	1062286	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1062286	1062286	G	T	SNP	ABCA7	NM_019112	human	genbank	57_37b	+1	reviewed	missense	c.5686	p.G1896C	0.966	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ABCC12	94160	genome.wustl.edu	37	16	48117854	48117854	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	48117854	48117854	T	A	SNP	ABCC12	NM_033226	human	genbank	57_37b	-1	reviewed	missense	c.3959	p.N1320I	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACE	1636	genome.wustl.edu	37	17	61562309	61562309	+	Silent	SNP	C	T	T	rs4316	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61562309	61562309	C	T	SNP	ACE	NM_152830	human	genbank	57_37b	+1	reviewed	silent	c.81	p.P27	0.004	NULL	HMMPfam_Peptidase_M2,superfamily_SSF55486,PatternScan_ZINC_PROTEASE	-		
ACO2	50	genome.wustl.edu	37	22	41865164	41865164	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	41865164	41865164	G	T	SNP	ACO2	NM_001098	human	genbank	57_37b	+1	reviewed	missense	c.14	p.S5I	1.000	NULL	superfamily_Aconitase_N,HMMPfam_Aconitase,PatternScan_ACONITASE_1,PatternScan_ACONITASE_2,superfamily_Aconitase/3IPM_dehydase_swvl,HMMPfam_Aconitase_C	-	no_errors	
ANKRD12	23253	genome.wustl.edu	37	18	9258366	9258369	+	Frame_Shift_Del	DEL	CAGT	CAGT	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	CAGT	CAGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	9258366	9258369	CAGT	-	DEL	ANKRD12	NM_015208	human	genbank	57_37b	+1	validated	frame_shift_del	c.5101_5104	p.S1702fs	0.170:0.111:0.004:0.001	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	(deletion:cds_exon[9254209,9258929])	no_errors	
ANKRD28	23243	genome.wustl.edu	37	3	15765918	15765918	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	15765918	15765918	C	G	SNP	ANKRD28	NM_015199	human	genbank	57_37b	-1	provisional	missense	c.664	p.V222L	1.000	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank	-	no_errors	
APLP1	333	genome.wustl.edu	37	19	36369538	36369538	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36369538	36369538	G	T	SNP	APLP1	NM_001024807	human	genbank	57_37b	+1	reviewed	silent	c.1632	p.L544	0.984	NULL	HMMPfam_A4_EXTRA,HMMSmart_SM00006,superfamily_A heparin-binding domain,superfamily_Amyloid beta a4 protein copper binding domain (domain 2),PatternScan_A4_EXTRA,superfamily_CAPPD an extracellular domain of amyloid beta A4 protein,HMMPfam_APP_amyloid,PatternScan_A4_INTRA	-	no_errors	
ATP1B4	23439	genome.wustl.edu	37	X	119509272	119509272	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	119509272	119509272	C	A	SNP	ATP1B4	NM_001142447	human	genbank	57_37b	+1	validated	missense	c.608	p.P203Q	0.239	HMMPfam_Na_K-ATPase	PatternScan_ATPASE_NA_K_BETA_1,HMMPfam_Na_K-ATPase,PatternScan_ATPASE_NA_K_BETA_2	-	no_errors	
BMPER	168667	genome.wustl.edu	37	7	34091485	34091485	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	34091485	34091485	T	C	SNP	BMPER	NM_133468	human	genbank	57_37b	+1	validated	missense	c.689	p.V230A	1.000	NULL	HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_VWD,HMMPfam_VWD,HMMPfam_C8,superfamily_Cysrich_TIL,HMMPfam_TIL	-	no_errors	
BRWD1	54014	genome.wustl.edu	37	21	40569039	40569039	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	40569039	40569039	C	G	SNP	BRWD1	NM_018963	human	genbank	57_37b	-1	reviewed	missense	c.5956	p.E1986Q	0.991	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
C10orf68	79741	genome.wustl.edu	37	10	33165292	33165292	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	33165292	33165292	C	T	SNP	C10orf68	NM_024688	human	genbank	57_37b	+1	validated	nonsense	c.1858	p.R620*	0.000	NULL	NULL	-	no_errors	
C17orf57	124989	genome.wustl.edu	37	17	45452315	45452315	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	45452315	45452315	C	G	SNP	C17orf57	NM_152347	human	genbank	57_37b	+1	provisional	missense	c.1355	p.T452S	0.001	superfamily_EF-hand	superfamily_EF-hand	-	no_errors	
C1orf173	127254	genome.wustl.edu	37	1	75037981	75037981	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	75037981	75037981	G	A	SNP	C1orf173	NM_001002912	human	genbank	57_37b	-1	validated	missense	c.3413	p.S1138F	0.000	NULL	NULL	-	no_errors	
C22orf43	51233	genome.wustl.edu	37	22	23964316	23964316	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	23964316	23964316	C	A	SNP	C22orf43	NM_016449	human	genbank	57_37b	-1	provisional	missense	c.346	p.D116Y	0.008	NULL	NULL	-	no_errors	
C4orf22	255119	genome.wustl.edu	37	4	81884720	81884720	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	81884720	81884720	A	G	SNP	C4orf22	NM_152770	human	genbank	57_37b	+1	predicted	missense	c.656	p.Y219C	1.000	NULL	NULL	-	no_errors	
C9orf93	203238	genome.wustl.edu	37	9	15623373	15623373	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	15623373	15623373	A	C	SNP	C9orf93	NM_173550	human	genbank	57_37b	+1	predicted	missense	c.784	p.S262R	1.000	NULL	NULL	-	no_errors	
CACNA1E	777	genome.wustl.edu	37	1	181480573	181480573	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	181480573	181480573	G	T	SNP	CACNA1E	NM_000721	human	genbank	57_37b	+1	reviewed	missense	c.439	p.G147W	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CACNG1	786	genome.wustl.edu	37	17	65052324	65052324	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	65052324	65052324	C	A	SNP	CACNG1	NM_000727	human	genbank	57_37b	+1	reviewed	missense	c.606	p.F202L	1.000	NULL	HMMPfam_PMP22_Claudin	-	no_errors	
CCDC104	112942	genome.wustl.edu	37	2	55746978	55746978	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55746978	55746978	A	G	SNP	CCDC104	NM_080667	human	genbank	57_37b	+1	validated	missense	c.41	p.E14G	1.000	NULL	NULL	-	no_errors	
CCDC137	339230	genome.wustl.edu	37	17	79637367	79637367	+	Missense_Mutation	SNP	C	C	G	rs7226091	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79637367	79637367	C	G	SNP	CCDC137	NM_199287	human	genbank	57_37b	+1	validated	missense	c.381	p.H127Q	0.048	NULL	NULL	-		
CCDC144NL	339184	genome.wustl.edu	37	17	20768749	20768750	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	AT	AT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	20768749	20768750	AT	-	DEL	CCDC144NL	NM_001004306	human	genbank	57_37b	-1	provisional	frame_shift_del	c.645_644	p.H215fs	0.009:0.008	NULL	NULL	(deletion:cds_exon[20768728,20768822])	no_errors	
CCDC63	160762	genome.wustl.edu	37	12	111291294	111291294	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	111291294	111291294	G	A	SNP	CCDC63	NM_152591	human	genbank	57_37b	+1	provisional	missense	c.95	p.R32Q	0.007	NULL	NULL	-	no_errors	
CD97	976	genome.wustl.edu	37	19	14513412	14513412	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14513412	14513412	C	G	SNP	CD97	NM_078481	human	genbank	57_37b	+1	reviewed	missense	c.1187	p.P396R	0.000	NULL	HMMSmart_SM00181,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors	
CEACAM18	729767	genome.wustl.edu	37	19	51984913	51984923	+	Frame_Shift_Del	DEL	GTGGCCTGTGA	GTGGCCTGTGA	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	GTGGCCTGTGA	GTGGCCTGTGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51984913	51984923	GTGGCCTGTGA	-	DEL	CEACAM18	NM_001080405	human	genbank	57_37b	+1	provisional	frame_shift_del	c.850_856	p.V284fs	0.045:0.064:0.064:0.035:0.275:0.666:0.719	HMMSmart_SM00409,superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	(deletion:cds_exon[51984647,51984919], intron[51984920,51986270])	no_errors	
CTSE	1510	genome.wustl.edu	37	1	206325403	206325403	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	206325403	206325403	G	C	SNP	CTSE	NM_001910	human	genbank	57_37b	+1	reviewed	missense	c.628	p.V210L	1.000	superfamily_Pept_Aspartic,HMMPfam_Asp	superfamily_Pept_Aspartic,HMMPfam_A1_Propeptide,HMMPfam_Asp,PatternScan_ASP_PROTEASE	-	no_errors	
DYNC2H1	79659	genome.wustl.edu	37	11	103027330	103027330	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	103027330	103027330	G	A	SNP	DYNC2H1	NM_001080463	human	genbank	57_37b	+1	reviewed	missense	c.3958	p.G1320R	1.000	HMMPfam_DHC_N2	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
EFR3A	23167	genome.wustl.edu	37	8	132980672	132980672	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	132980672	132980672	C	A	SNP	EFR3A	NM_015137	human	genbank	57_37b	+1	validated	missense	c.986	p.S329Y	1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors	
EHMT1	79813	genome.wustl.edu	37	9	140637847	140637847	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140637847	140637847	C	T	SNP	EHMT1	ENST00000460843	human	ensembl	57_37b	+1	known	missense	c.848	p.A283V	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SET domain,HMMSmart_SM00468,HMMPfam_Pre-SET,HMMPfam_SET,HMMSmart_SM00317	-	no_errors	
ENSG00000138018	0	genome.wustl.edu	37	2	26607960	26607960	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	26607960	26607960	C	G	SNP	ENSG00000138018	ENST00000407686	human	ensembl	57_37b	+1	known	missense	c.865	p.P289A	1.000	NULL	HMMPfam_CDP-OH_P_transf,PatternScan_CDP_ALCOHOL_P_TRANSF	-	no_errors	
ENSG00000233422	0	genome.wustl.edu	37	19	14857037	14857038	+	RNA	INS	-	-	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14857037	14857038	-	T	INS	ENSG00000233422	ENST00000430444	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.016:0.021	-	-	-	no_errors	
EPB41L2	2037	genome.wustl.edu	37	6	131184807	131184807	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	131184807	131184807	T	G	SNP	EPB41L2	NM_001431	human	genbank	57_37b	-1	validated	missense	c.2881	p.T961P	1.000	HMMPfam_4_1_CTD	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,HMMPfam_FERM_C,HMMPfam_FA,HMMPfam_SAB,HMMPfam_4_1_CTD	-	no_errors	
EPHB1	2047	genome.wustl.edu	37	3	134670326	134670326	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	134670326	134670326	G	C	SNP	EPHB1	NM_004441	human	genbank	57_37b	+1	reviewed	silent	c.237	p.R79	0.954	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
FBXO7	25793	genome.wustl.edu	37	22	32871383	32871383	+	Missense_Mutation	SNP	T	T	G	rs8137714	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	32871383	32871383	T	G	SNP	FBXO7	NM_001033024	human	genbank	57_37b	+1	reviewed	missense	c.35	p.L12R	0.002	NULL	superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256	-		
FBXW7	55294	genome.wustl.edu	37	4	153253831	153253831	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	153253831	153253831	A	G	SNP	FBXW7	NM_033632	human	genbank	57_37b	-1	reviewed	missense	c.902	p.L301P	1.000	superfamily_WD40 repeat-like,superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256	superfamily_WD40 repeat-like,superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
FLT3	2322	genome.wustl.edu	37	13	28622415	28622415	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	28622415	28622415	T	C	SNP	FLT3	NM_004119	human	genbank	57_37b	-1	reviewed	missense	c.1202	p.Y401C	1.000	NULL	superfamily_SSF48726,HMMPfam_ig,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
FNIP2	0	genome.wustl.edu	37	4	159756601	159756601	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	159756601	159756601	G	C	SNP	FNIP2	NM_020840	human	genbank	57_37b	+1	validated	missense	c.700	p.D234H	1.000	NULL	NULL	-	no_errors	
FSCB	84075	genome.wustl.edu	37	14	44975063	44975063	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	44975063	44975063	A	G	SNP	FSCB	NM_032135	human	genbank	57_37b	-1	validated	silent	c.1128	p.P376	0.000	NULL	NULL	-	no_errors	
GP2	2813	genome.wustl.edu	37	16	20335274	20335274	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20335274	20335274	G	C	SNP	GP2	NM_001007240	human	genbank	57_37b	-1	validated	silent	c.399	p.T133	0.850	NULL	HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors	
GRIK3	2899	genome.wustl.edu	37	1	37270667	37270667	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	37270667	37270667	G	C	SNP	GRIK3	NM_000831	human	genbank	57_37b	-1	reviewed	missense	c.2486	p.A829G	1.000	HMMPfam_Lig_chan,superfamily_SSF55620	superfamily_SSF53822,HMMPfam_ANF_receptor,HMMSmart_PBPe,superfamily_SSF53850,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,superfamily_SSF55620	-	no_errors	
HCG4	54435	genome.wustl.edu	37	6	29759066	29759066	+	RNA	SNP	A	A	G	rs116026765	byCluster;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29759066	29759066	A	G	SNP	HCG4	NR_002139	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.002	-	-	-		
HEPHL1	341208	genome.wustl.edu	37	11	93844724	93844724	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	93844724	93844724	C	A	SNP	HEPHL1	NM_001098672	human	genbank	57_37b	+1	validated	missense	c.3230	p.T1077N	0.992	NULL	superfamily_Cupredoxin,HMMPfam_Cu-oxidase_3,HMMPfam_Cu-oxidase_2,PatternScan_MULTICOPPER_OXIDASE1,PatternScan_MULTICOPPER_OXIDASE2	-	no_errors	
IL15	3600	genome.wustl.edu	37	4	142651125	142651125	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	142651125	142651125	G	T	SNP	IL15	NM_000585	human	genbank	57_37b	+1	reviewed	missense	c.366	p.L122F	0.091	HMMPfam_IL15	HMMPfam_IL15	-	no_errors	
INTS2	57508	genome.wustl.edu	37	17	59967189	59967189	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59967189	59967189	G	A	SNP	INTS2	NM_020748	human	genbank	57_37b	-1	validated	silent	c.1966	p.L656	1.000	NULL	NULL	-	no_errors	
KIAA0556	23247	genome.wustl.edu	37	16	27752151	27752151	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	27752151	27752151	C	T	SNP	KIAA0556	NM_015202	human	genbank	57_37b	+1	validated	missense	c.2533	p.P845S	0.004	NULL	superfamily_Galactose-binding domain-like,PatternScan_AKH	-	no_errors	
KIAA0907	22889	genome.wustl.edu	37	1	155893455	155893455	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155893455	155893455	G	C	SNP	KIAA0907	NM_014949	human	genbank	57_37b	-1	predicted	missense	c.917	p.A306G	1.000	superfamily_Eukaryotic type KH-domain (KH-domain type I)	superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors	
KIAA1009	22832	genome.wustl.edu	37	6	84834930	84834930	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	84834930	84834930	T	A	SNP	KIAA1009	NM_014895	human	genbank	57_37b	-1	validated	missense	c.4071	p.R1357S	1.000	NULL	NULL	-	no_errors	
KIAA1632	57724	genome.wustl.edu	37	18	43460065	43460065	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	43460065	43460065	G	C	SNP	KIAA1632	NM_020964	human	genbank	57_37b	-1	validated	missense	c.5642	p.S1881C	0.013	NULL	NULL	-	no_errors	
LAMB4	22798	genome.wustl.edu	37	7	107674765	107674773	+	In_Frame_Del	DEL	AGATTTAAT	AGATTTAAT	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	AGATTTAAT	AGATTTAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	107674765	107674773	AGATTTAAT	-	DEL	LAMB4	NM_007356	human	genbank	57_37b	-1	validated	in_frame_del	c.4706_4698	p.LNL1567in_frame_del	0.679:0.677:0.369:0.216:0.196:0.075:0.024:0.017:0.019	NULL	HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,PatternScan_EGF_2	(deletion:cds_exon[107674653,107674791])	no_errors	
LOC100290391	0	genome.wustl.edu	37	6	32729412	32729412	+	RNA	SNP	C	C	A	rs114173247	byCluster;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32729412	32729412	C	A	SNP	LOC100290391	XR_079197	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.002	-	-	-		
LOC399881	399881	genome.wustl.edu	37	11	43284736	43284736	+	RNA	DEL	T	T	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	43284736	43284736	T	-	DEL	LOC399881	XR_040375	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.988	-	-	(deletion:rna[43283054,43284830])	no_errors	
LOC646214	646214	genome.wustl.edu	37	15	21935518	21935518	+	RNA	SNP	G	G	A	rs60315887	by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	21935518	21935518	G	A	SNP	LOC646214	NR_027053	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.055	-	-	-		
LRRC42	115353	genome.wustl.edu	37	1	54423919	54423919	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	54423919	54423919	C	G	SNP	LRRC42	NM_052940	human	genbank	57_37b	+1	provisional	missense	c.571	p.L191V	0.995	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
LY75	4065	genome.wustl.edu	37	2	160750486	160750486	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	160750486	160750486	T	A	SNP	LY75	NM_002349	human	genbank	57_37b	-1	validated	silent	c.576	p.P192	0.963	superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1	superfamily_Ricin B-like lectins,HMMSmart_SM00458,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors	
MAP3K1	4214	genome.wustl.edu	37	5	56152573	56152574	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	56152573	56152574	-	T	INS	MAP3K1	NM_005921	human	genbank	57_37b	+1	validated	frame_shift_ins	c.629_630	p.V211fs	1.000:0.725	NULL	PatternScan_ZF_RING_1,HMMPfam_SWIM,superfamily_SSF57850,HMMSmart_RING,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MAP3K9	4293	genome.wustl.edu	37	14	71197537	71197537	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	71197537	71197537	G	C	SNP	MAP3K9	NM_033141	human	genbank	57_37b	-1	validated	missense	c.2917	p.P973A	1.000	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_Kinase_like,HMMSmart_TyrKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MAPK8IP1	9479	genome.wustl.edu	37	11	45923586	45923595	+	Frame_Shift_Del	DEL	CTCGATCATC	CTCGATCATC	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	CTCGATCATC	CTCGATCATC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	45923586	45923595	CTCGATCATC	-	DEL	MAPK8IP1	NM_005456	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.578_587	p.R194fs	1.000:0.994:0.999:0.998:0.970:1.000:1.000:0.996:1.000:0.998	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF50729,HMMSmart_PTB,HMMPfam_PID	(deletion:cds_exon[45923531,45923612])	no_errors	
MC3R	4159	genome.wustl.edu	37	20	54824566	54824566	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	54824566	54824566	G	A	SNP	MC3R	NM_019888	human	genbank	57_37b	+1	reviewed	missense	c.667	p.A223T	0.988	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
MICA	4276	genome.wustl.edu	37	6	31380161	31380162	+	Frame_Shift_Ins	INS	-	-	CT	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31380161	31380162	-	CT	INS	MICA	ENST00000364810	human	ensembl	57_37b	+1	known	frame_shift_ins	c.952_953	p.G318fs	0.000:0.001	NULL	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog,superfamily_SSF48726,HMMPfam_C1-set,HMMSmart_IGc1	-	no_errors	
MUC17	140453	genome.wustl.edu	37	7	100681618	100681618	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100681618	100681618	C	A	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	missense	c.6921	p.N2307K	0.001	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MUC5B	727897	genome.wustl.edu	37	11	1272800	1272800	+	Missense_Mutation	SNP	C	C	T	rs55693520	byCluster;byFrequency;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1272800	1272800	C	T	SNP	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	missense	c.14699	p.S4900L	0.000	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	-		
MYH11	4629	genome.wustl.edu	37	16	15829383	15829383	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15829383	15829383	G	T	SNP	MYH11	NM_001040114	human	genbank	57_37b	-1	reviewed	missense	c.3367	p.L1123M	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
NFASC	23114	genome.wustl.edu	37	1	204921156	204921156	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	204921156	204921156	A	C	SNP	NFASC	NM_015090	human	genbank	57_37b	+1	reviewed	missense	c.109	p.I37L	1.000	HMMPfam_I-set,superfamily_SSF48726	HMMPfam_I-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig,HMMSmart_IGc2,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors	
NKTR	4820	genome.wustl.edu	37	3	42679861	42679861	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	42679861	42679861	T	A	SNP	NKTR	NM_005385	human	genbank	57_37b	+1	reviewed	missense	c.2665	p.S889T	1.000	NULL	superfamily_CSA_PPIase,HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1	-	no_errors	
NOX3	50508	genome.wustl.edu	37	6	155775952	155775952	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	155775952	155775952	G	T	SNP	NOX3	NM_015718	human	genbank	57_37b	-1	reviewed	missense	c.248	p.T83K	0.767	HMMPfam_Ferric_reduct	HMMPfam_Ferric_reduct,superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_8,superfamily_SSF52343,HMMPfam_NAD_binding_6	-	no_errors	
NPR3	4883	genome.wustl.edu	37	5	32780845	32780847	+	In_Frame_Del	DEL	TCC	TCC	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	TCC	TCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32780845	32780847	TCC	-	DEL	NPR3	NM_000908	human	genbank	57_37b	+1	validated	in_frame_del	c.1213_1215	p.S405in_frame_del	1.000:1.000:1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_ANF_RECEPTORS	(deletion:cds_exon[32780828,32780922])	no_errors	
OR4C45	403257	genome.wustl.edu	37	11	48367409	48367409	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	48367409	48367409	C	A	SNP	OR4C45	ENST00000415304	human	ensembl	57_37b	-1	known	missense	c.428	p.G143V	0.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors	
OTUD7A	161725	genome.wustl.edu	37	15	31851321	31851321	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	31851321	31851321	G	A	SNP	OTUD7A	NM_130901	human	genbank	57_37b	-1	provisional	missense	c.401	p.A134V	1.000	NULL	superfamily_UBA-like,HMMPfam_OTU,HMMSmart_SM00259	-	no_errors	
PANK3	79646	genome.wustl.edu	37	5	167984618	167984618	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	167984618	167984618	A	G	SNP	PANK3	NM_024594	human	genbank	57_37b	-1	reviewed	silent	c.1071	p.F357	1.000	superfamily_SSF53067,HMMPfam_Fumble	superfamily_SSF53067,HMMPfam_Fumble	-	no_errors	
PARD6B	84612	genome.wustl.edu	37	20	49366477	49366477	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	49366477	49366477	G	C	SNP	PARD6B	NM_032521	human	genbank	57_37b	+1	reviewed	missense	c.571	p.G191R	0.995	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	HMMPfam_PB1,HMMSmart_PB1,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors	
PAX6	5080	genome.wustl.edu	37	11	31816281	31816281	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	31816281	31816281	G	A	SNP	PAX6	NM_001604	human	genbank	57_37b	-1	reviewed	silent	c.621	p.N207	0.104	NULL	HMMPfam_PAX,HMMSmart_PAX,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
PCDH12	51294	genome.wustl.edu	37	5	141335925	141335925	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	141335925	141335925	G	A	SNP	PCDH12	NM_016580	human	genbank	57_37b	-1	reviewed	missense	c.1492	p.R498C	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin_2,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHA8	56140	genome.wustl.edu	37	5	140223040	140223040	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140223040	140223040	G	C	SNP	PCDHA8	NM_018911	human	genbank	57_37b	+1	reviewed	missense	c.2134	p.V712L	0.984	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHB18	54660	genome.wustl.edu	37	5	140615467	140615467	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140615467	140615467	C	T	SNP	PCDHB18	ENST00000274705	human	ensembl	57_37b	+1	known	silent	c.1182	p.N394	0.989	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin	HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors	
PCDHGA8	9708	genome.wustl.edu	37	5	140774003	140774003	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140774003	140774003	C	A	SNP	PCDHGA8	NM_032088	human	genbank	57_37b	+1	reviewed	silent	c.1623	p.P541	0.771	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMSmart_SM00112,superfamily_Cadherin-like,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PEX6	5190	genome.wustl.edu	37	6	42932585	42932585	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	42932585	42932585	G	C	SNP	PEX6	NM_000287	human	genbank	57_37b	-1	reviewed	missense	c.2749	p.L917V	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
PIK3C2B	5287	genome.wustl.edu	37	1	204393999	204393999	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	204393999	204393999	C	T	SNP	PIK3C2B	NM_002646	human	genbank	57_37b	-1	reviewed	missense	c.4886	p.R1629Q	0.993	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	superfamily_Ubiquitin-like,HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PI3K_C2,superfamily_ARM repeat,HMMSmart_SM00145,HMMPfam_PI3Ka,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
PTPRN2	5799	genome.wustl.edu	37	7	157396697	157396697	+	Silent	SNP	G	G	A	rs17853260	byCluster;byFrequency;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	157396697	157396697	G	A	SNP	PTPRN2	NM_002847	human	genbank	57_37b	-1	reviewed	silent	c.2415	p.P805	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-		
QTRT1	81890	genome.wustl.edu	37	19	10823032	10823032	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10823032	10823032	C	A	SNP	QTRT1	ENST00000421333	human	ensembl	57_37b	+1	known	missense	c.55	p.P19T	0.001	HMMPfam_TGT	HMMPfam_TGT,superfamily_tRNA_ribo_trans	-	no_errors	
RBM47	54502	genome.wustl.edu	37	4	40440303	40440304	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	40440303	40440304	CT	-	DEL	RBM47	NM_001098634	human	genbank	57_37b	-1	validated	frame_shift_del	c.608_607	p.S203fs	1.000:1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	(deletion:cds_exon[40439788,40440910])	no_errors	
RFPL1	5988	genome.wustl.edu	37	22	29834893	29834893	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	29834893	29834893	G	A	SNP	RFPL1	NM_021026	human	genbank	57_37b	+1	validated	missense	c.113	p.S38N	0.003	superfamily_SSF57850	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMPfam_zf-C3HC4,HMMSmart_RING,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
RGPD3	653489	genome.wustl.edu	37	2	107041153	107041153	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	107041153	107041153	G	A	SNP	RGPD3	NM_001144013	human	genbank	57_37b	-1	provisional	silent	c.3270	p.N1090	0.929	superfamily_SSF50729,HMMPfam_Ran_BP1	superfamily_SSF48452,HMMPfam_TPR_1,superfamily_SSF50729,HMMPfam_Ran_BP1,HMMSmart_RanBD,HMMPfam_GRIP,HMMSmart_Grip	-	no_errors	
RMND5B	64777	genome.wustl.edu	37	5	177573261	177573261	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177573261	177573261	G	A	SNP	RMND5B	NM_022762	human	genbank	57_37b	+1	provisional	missense	c.841	p.E281K	1.000	HMMSmart_SM00757	HMMSmart_SM00667,HMMSmart_SM00668,HMMSmart_SM00757,superfamily_RING/U-box	-	no_errors	
RUFY1	80230	genome.wustl.edu	37	5	179023616	179023616	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	179023616	179023616	T	G	SNP	RUFY1	NM_025158	human	genbank	57_37b	+1	validated	missense	c.1565	p.L522R	0.844	NULL	HMMPfam_RUN,HMMSmart_SM00593,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors	
RYR2	6262	genome.wustl.edu	37	1	237890431	237890431	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	237890431	237890431	A	G	SNP	RYR2	NM_001035	human	genbank	57_37b	+1	reviewed	silent	c.10770	p.L3590	0.942	NULL	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
SESTD1	91404	genome.wustl.edu	37	2	179986599	179986599	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179986599	179986599	T	C	SNP	SESTD1	NM_178123	human	genbank	57_37b	-1	validated	missense	c.1340	p.N447S	1.000	superfamily_Spectrin	superfamily_Spectrin,HMMSmart_SPEC	-	no_errors	
SLC13A1	6561	genome.wustl.edu	37	7	122759261	122759261	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	122759261	122759261	T	A	SNP	SLC13A1	NM_022444	human	genbank	57_37b	-1	validated	missense	c.1386	p.L462F	0.993	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors	
SLC17A2	10246	genome.wustl.edu	37	6	25921430	25921430	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	25921430	25921430	G	T	SNP	SLC17A2	NM_005835	human	genbank	57_37b	-1	provisional	silent	c.451	p.R151	0.691	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
SLC17A2	10246	genome.wustl.edu	37	6	25921485	25921485	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	25921485	25921485	G	A	SNP	SLC17A2	NM_005835	human	genbank	57_37b	-1	provisional	silent	c.396	p.L132	1.000	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter	-	no_errors	
SLC35A5	55032	genome.wustl.edu	37	3	112300106	112300106	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	112300106	112300106	C	T	SNP	SLC35A5	NM_017945	human	genbank	57_37b	+1	provisional	missense	c.1142	p.P381L	0.118	NULL	superfamily_SSF103481,HMMPfam_Nuc_sug_transp	-	no_errors	
SMEK2	57223	genome.wustl.edu	37	2	55808732	55808732	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55808732	55808732	C	-	DEL	SMEK2	NM_001122964	human	genbank	57_37b	-1	validated	frame_shift_del	c.1336	p.D446fs	1.000	superfamily_ARM repeat	superfamily_PH domain-like,superfamily_ARM repeat,HMMPfam_DUF625	(deletion:cds_exon[55808703,55808834])	no_errors	
TACC2	10579	genome.wustl.edu	37	10	123985898	123985898	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	123985898	123985898	G	A	SNP	TACC2	NM_206862	human	genbank	57_37b	+1	reviewed	silent	c.7626	p.P2542	0.999	NULL	HMMPfam_TACC	-	no_errors	
TAS2R13	50838	genome.wustl.edu	37	12	11061556	11061556	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	11061556	11061556	G	C	SNP	TAS2R13	NM_023920	human	genbank	57_37b	-1	reviewed	missense	c.342	p.F114L	0.011	HMMPfam_TAS2R,superfamily_SSF81321	HMMPfam_TAS2R,superfamily_SSF81321	-	no_errors	
TIAM2	26230	genome.wustl.edu	37	6	155569172	155569172	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	155569172	155569172	C	T	SNP	TIAM2	NM_012454	human	genbank	57_37b	+1	reviewed	missense	c.3691	p.R1231W	1.000	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00455,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1	-	no_errors	
TMEM52	339456	genome.wustl.edu	37	1	1849529	1849529	+	Missense_Mutation	SNP	A	A	G	rs28640257	byCluster;byFrequency;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1849529	1849529	A	G	SNP	TMEM52	NM_178545	human	genbank	57_37b	-1	validated	missense	c.422	p.M141T	0.013	NULL	NULL	-		
TNKS1BP1	85456	genome.wustl.edu	37	11	57075876	57075876	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	57075876	57075876	C	T	SNP	TNKS1BP1	NM_033396	human	genbank	57_37b	-1	validated	missense	c.4309	p.G1437R	0.963	NULL	NULL	-	no_errors	
TRAF3IP3	80342	genome.wustl.edu	37	1	209954787	209954787	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	209954787	209954787	A	C	SNP	TRAF3IP3	NM_025228	human	genbank	57_37b	+1	provisional	missense	c.1487	p.Q496P	0.993	NULL	NULL	-	no_errors	
TRAM2	9697	genome.wustl.edu	37	6	52370468	52370468	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	52370468	52370468	G	A	SNP	TRAM2	NM_012288	human	genbank	57_37b	-1	reviewed	silent	c.804	p.G268	1.000	HMMSmart_SM00724,HMMPfam_TRAM_LAG1_CLN8	HMMPfam_TRAM1,HMMSmart_SM00724,HMMPfam_TRAM_LAG1_CLN8	-	no_errors	
TRIM63	84676	genome.wustl.edu	37	1	26386771	26386771	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	26386771	26386771	G	C	SNP	TRIM63	NM_032588	human	genbank	57_37b	-1	reviewed	missense	c.583	p.R195G	1.000	NULL	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX	-	no_errors	
TRIP12	9320	genome.wustl.edu	37	2	230656625	230656625	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	230656625	230656625	G	A	SNP	TRIP12	NM_004238	human	genbank	57_37b	-1	provisional	missense	c.4147	p.P1383S	1.000	NULL	superfamily_ARM-type_fold,HMMPfam_WWE,superfamily_HECT,HMMSmart_HECTc,HMMPfam_HECT	-	no_errors	
TRPM4	54795	genome.wustl.edu	37	19	49703867	49703867	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49703867	49703867	G	A	SNP	TRPM4	NM_017636	human	genbank	57_37b	+1	provisional	splice_site	c.2779-1	e19-1	1.000	-	-	-	no_errors	
TTC25	83538	genome.wustl.edu	37	17	40095238	40095238	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40095238	40095238	G	A	SNP	TTC25	ENST00000377543	human	ensembl	57_37b	+1	known	missense	c.871	p.E291K	0.949	superfamily_TPR-like	HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1	-	no_errors	
TTF2	8458	genome.wustl.edu	37	1	117617614	117617614	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	117617614	117617614	T	A	SNP	TTF2	NM_003594	human	genbank	57_37b	+1	reviewed	silent	c.408	p.A136	0.012	NULL	HMMPfam_zf-GRF,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
TXNIP	10628	genome.wustl.edu	37	1	145438841	145438841	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145438841	145438841	C	A	SNP	TXNIP	NM_006472	human	genbank	57_37b	+1	validated	silent	c.39	p.V13	1.000	superfamily_Ig_E-set,HMMPfam_Arrestin_N	superfamily_Ig_E-set,HMMPfam_Arrestin_N,HMMPfam_Arrestin_C	-	no_errors	
VCL	7414	genome.wustl.edu	37	10	75860849	75860849	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75860849	75860849	A	C	SNP	VCL	NM_014000	human	genbank	57_37b	+1	reviewed	silent	c.2016	p.T672	0.542	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	superfamily_alpha-catenin/vinculin,HMMPfam_Vinculin,PatternScan_VINCULIN_1,PatternScan_VINCULIN_2	-	no_errors	
VSX2	338917	genome.wustl.edu	37	14	74726397	74726397	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74726397	74726397	C	T	SNP	VSX2	NM_182894	human	genbank	57_37b	+1	reviewed	silent	c.672	p.A224	1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMPfam_OAR	-	no_errors	
WDR90	197335	genome.wustl.edu	37	16	711905	711905	+	Silent	SNP	A	A	G	rs2301426	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A09M-01	TCGA-A8-A09M-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	711905	711905	A	G	SNP	WDR90	NM_145294	human	genbank	57_37b	+1	provisional	silent	c.3879	p.P1293	0.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-		
WHSC1L1	54904	genome.wustl.edu	37	8	38172281	38172281	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	38172281	38172281	C	G	SNP	WHSC1L1	NM_023034	human	genbank	57_37b	-1	reviewed	missense	c.2126	p.S709T	1.000	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
WLS	0	genome.wustl.edu	37	1	68564426	68564426	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	68564426	68564426	G	A	SNP	WLS	NM_001002292	human	genbank	57_37b	-1	validated	silent	c.1521	p.L507	0.001	NULL	HMMPfam_DUF1171	-	no_errors	
WWC2	80014	genome.wustl.edu	37	4	184204028	184204028	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	184204028	184204028	G	A	SNP	WWC2	NM_024949	human	genbank	57_37b	+1	validated	missense	c.2852	p.R951K	0.000	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2	-	no_errors	
ZNF193	7746	genome.wustl.edu	37	6	28195034	28195034	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	28195034	28195034	C	A	SNP	ZNF193	NM_006299	human	genbank	57_37b	+1	provisional	missense	c.172	p.L58M	0.114	HMMPfam_SCAN,HMMSmart_SM00431	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF7	7553	genome.wustl.edu	37	8	146067735	146067735	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A09M-01	TCGA-A8-A09M-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	146067735	146067735	T	G	SNP	ZNF7	NM_003416	human	genbank	57_37b	+1	validated	missense	c.1243	p.C415G	0.990	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
