Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCB11	8647	genome.wustl.edu	37	2	169826001	169826001	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	169826001	169826001	C	A	SNP	ABCB11	NM_003742	human	genbank	57_37b	-1	reviewed	missense	c.1870	p.D624Y	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ABCC9	10060	genome.wustl.edu	37	12	22086720	22086720	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	22086720	22086720	C	G	SNP	ABCC9	NM_005691	human	genbank	57_37b	-1	reviewed	missense	c.280	p.D94H	1.000	NULL	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ABCG5	64240	genome.wustl.edu	37	2	44065696	44065696	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	44065696	44065696	G	C	SNP	ABCG5	NM_022436	human	genbank	57_37b	-1	reviewed	silent	c.123	p.L41	0.016	superfamily_SSF52540	PatternScan_ABC_TRANSPORTER_1,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran,HMMPfam_ABC2_membrane	-	no_errors	
ACOT4	122970	genome.wustl.edu	37	14	74062026	74062026	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74062026	74062026	G	C	SNP	ACOT4	NM_152331	human	genbank	57_37b	+1	validated	missense	c.934	p.E312Q	0.999	superfamily_SSF53474,HMMPfam_BAAT_C	HMMPfam_Bile_Hydr_Trans,superfamily_SSF53474,HMMPfam_BAAT_C	-	no_errors	
ADAM18	8749	genome.wustl.edu	37	8	39495172	39495172	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	39495172	39495172	G	T	SNP	ADAM18	NM_014237	human	genbank	57_37b	+1	reviewed	missense	c.777	p.W259C	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin"	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2"	-	no_errors	
ADAMTS1	9510	genome.wustl.edu	37	21	28212328	28212328	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	28212328	28212328	C	G	SNP	ADAMTS1	NM_006988	human	genbank	57_37b	-1	reviewed	missense	c.1718	p.R573T	1.000	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1	PatternScan_DISINTEGRIN_1,HMMPfam_Pep_M12B_propep,superfamily_SSF55486,HMMPfam_Reprolysin,PatternScan_ZINC_PROTEASE,HMMSmart_ACR,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1	-	no_errors	
ADORA1	134	genome.wustl.edu	37	1	203134926	203134926	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203134926	203134926	G	A	SNP	ADORA1	NM_000674	human	genbank	57_37b	+1	reviewed	silent	c.879	p.Q293	1.000	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
ADRA1D	146	genome.wustl.edu	37	20	4229170	4229170	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	4229170	4229170	C	T	SNP	ADRA1D	NM_000678	human	genbank	57_37b	-1	reviewed	silent	c.435	p.L145	0.997	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like	-	no_errors	
ALCAM	214	genome.wustl.edu	37	3	105271008	105271008	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	105271008	105271008	G	A	SNP	ALCAM	NM_001627	human	genbank	57_37b	+1	validated	missense	c.1528	p.E510K	1.000	NULL	HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00406,HMMPfam_C2-set_2,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
AMIGO3	386724	genome.wustl.edu	37	3	49756806	49756806	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49756806	49756806	G	C	SNP	AMIGO3	NM_198722	human	genbank	57_37b	-1	validated	silent	c.93	p.L31	0.021	NULL	HMMPfam_LRRNT,HMMSmart_LRRNT,superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF48726,HMMSmart_IG	-	no_errors	
ANK3	288	genome.wustl.edu	37	10	62038849	62038849	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	62038849	62038849	C	G	SNP	ANK3	NM_020987	human	genbank	57_37b	-1	reviewed	missense	c.274	p.E92Q	1.000	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_ZU5,HMMSmart_ZU5,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors	
ANKRD31	256006	genome.wustl.edu	37	5	74441898	74441898	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	74441898	74441898	G	C	SNP	ANKRD31	ENST00000274361	human	ensembl	57_37b	-1	known	missense	c.3338	p.S1113C	0.000	superfamily_ANK	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors	
ANO8	57719	genome.wustl.edu	37	19	17444235	17444235	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17444235	17444235	C	G	SNP	ANO8	NM_020959	human	genbank	57_37b	-1	validated	missense	c.346	p.E116Q	1.000	NULL	HMMPfam_DUF590	-	no_errors	
ANUBL1	93550	genome.wustl.edu	37	10	46143787	46143787	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46143787	46143787	T	C	SNP	ANUBL1	NM_001128324	human	genbank	57_37b	-1	validated	missense	c.524	p.D175G	0.004	NULL	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin,HMMSmart_SM00154,HMMPfam_zf-AN1	-	no_errors	
ARHGAP25	9938	genome.wustl.edu	37	2	69034499	69034499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	69034499	69034499	C	T	SNP	ARHGAP25	ENST00000488795	human	ensembl	57_37b	+1	known	missense	c.356	p.S119L	1.000	NULL	superfamily_PH domain-like,HMMPfam_PH	-	no_errors	
ARHGEF9	23229	genome.wustl.edu	37	X	62885817	62885817	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	62885817	62885817	G	T	SNP	ARHGEF9	NM_015185	human	genbank	57_37b	-1	validated	missense	c.1005	p.N335K	1.000	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	PatternScan_DH_1,HMMSmart_SH3,superfamily_SH3,HMMPfam_SH3_1,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	-	no_errors	
ARID2	196528	genome.wustl.edu	37	12	46245928	46245928	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	46245928	46245928	C	G	SNP	ARID2	NM_152641	human	genbank	57_37b	+1	validated	nonsense	c.4022	p.S1341*	0.797	NULL	"HMMPfam_ARID,superfamily_ARID-like,HMMSmart_SM00501,superfamily_""Winged helix"" DNA-binding domain,PatternScan_ZINC_FINGER_C2H2_1"	-	no_errors	
ARMCX5	64860	genome.wustl.edu	37	X	101858368	101858368	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	101858368	101858368	T	C	SNP	ARMCX5	NM_022838	human	genbank	57_37b	+1	validated	silent	c.1299	p.Y433	0.051	HMMPfam_DUF634,superfamily_ARM repeat	PatternScan_CPSASE_2,HMMPfam_DUF634,superfamily_ARM repeat	-	no_errors	
ATF7IP2	80063	genome.wustl.edu	37	16	10567815	10567815	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	10567815	10567815	G	C	SNP	ATF7IP2	NM_024997	human	genbank	57_37b	+1	validated	missense	c.1518	p.L506F	0.988	NULL	NULL	-	no_errors	
ATP13A3	79572	genome.wustl.edu	37	3	194158079	194158079	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	194158079	194158079	C	T	SNP	ATP13A3	NM_024524	human	genbank	57_37b	-1	validated	missense	c.1960	p.A654T	1.000	superfamily_Calcium ATPase transmembrane domain M,superfamily_HAD-like,HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors	
ATP13A4	84239	genome.wustl.edu	37	3	193151690	193151690	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	193151690	193151690	G	C	SNP	ATP13A4	NM_032279	human	genbank	57_37b	-1	validated	nonsense	c.2786	p.S929*	1.000	superfamily_Calcium ATPase transmembrane domain M	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_HAD-like	-	no_errors	
ATP6V0E2	155066	genome.wustl.edu	37	7	149575859	149575859	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149575859	149575859	G	A	SNP	ATP6V0E2	ENST00000307445	human	ensembl	57_37b	+1	known	missense	c.37	p.D13N	1.000	NULL	NULL	-	no_errors	
ATP7A	538	genome.wustl.edu	37	X	77294386	77294386	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	77294386	77294386	G	A	SNP	ATP7A	NM_000052	human	genbank	57_37b	+1	reviewed	missense	c.3564	p.M1188I	1.000	superfamily_Calcium ATPase transmembrane domain M,superfamily_HAD-like,HMMPfam_Hydrolase,superfamily_Metal cation-transporting ATPase ATP-binding domain N	superfamily_HMA heavy metal-associated domain,HMMPfam_HMA,PatternScan_HMA_1,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors	
B2M	567	genome.wustl.edu	37	15	45003751	45003751	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	45003751	45003751	C	T	SNP	B2M	NM_004048	human	genbank	57_37b	+1	reviewed	missense	c.7	p.R3C	0.000	NULL	superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors	
BAZ2B	29994	genome.wustl.edu	37	2	160231237	160231237	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	160231237	160231237	C	T	SNP	BAZ2B	NM_013450	human	genbank	57_37b	-1	validated	missense	c.4033	p.E1345K	1.000	NULL	superfamily_DNA-binding domain,HMMPfam_MBD,HMMSmart_SM00391,HMMPfam_DDT,HMMSmart_SM00571,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
BIRC6	57448	genome.wustl.edu	37	2	32770872	32770872	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	32770872	32770872	C	T	SNP	BIRC6	NM_016252	human	genbank	57_37b	+1	reviewed	missense	c.12755	p.S4252F	1.000	NULL	superfamily_Inhibitor of apoptosis (IAP) repeat,HMMSmart_SM00238,HMMPfam_BIR,superfamily_Galactose-binding domain-like,superfamily_UBC-like,HMMSmart_SM00212,HMMPfam_UQ_con	-	no_errors	
BLM	641	genome.wustl.edu	37	15	91352454	91352454	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	91352454	91352454	C	T	SNP	BLM	NM_000057	human	genbank	57_37b	+1	reviewed	missense	c.3839	p.S1280L	0.716	HMMSmart_HRDC,HMMPfam_HRDC	HMMPfam_BDHCT,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,PatternScan_DEAH_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_RQC,superfamily_HRDC_like,HMMSmart_HRDC,HMMPfam_HRDC	-	no_errors	
BMPER	168667	genome.wustl.edu	37	7	34125658	34125658	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	34125658	34125658	G	A	SNP	BMPER	NM_133468	human	genbank	57_37b	+1	validated	missense	c.1699	p.E567K	1.000	HMMPfam_C8	HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_VWD,HMMPfam_VWD,HMMPfam_C8,superfamily_Cysrich_TIL,HMMPfam_TIL	-	no_errors	
BTN2A1	11120	genome.wustl.edu	37	6	26463541	26463541	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26463541	26463541	C	G	SNP	BTN2A1	NM_007049	human	genbank	57_37b	+1	reviewed	missense	c.500	p.S167C	0.937	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
C10orf76	79591	genome.wustl.edu	37	10	103699622	103699622	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	103699622	103699622	G	A	SNP	C10orf76	NM_024541	human	genbank	57_37b	-1	validated	silent	c.1779	p.I593	1.000	HMMPfam_DUF1741	HMMPfam_DUF1741	-	no_errors	
C11orf49	79096	genome.wustl.edu	37	11	47178576	47178576	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47178576	47178576	T	-	DEL	C11orf49	NM_001003677	human	genbank	57_37b	+1	validated	frame_shift_del	c.454	p.F152fs	1.000	NULL	NULL	(deletion:cds_exon[47178574,47178769])	no_errors	
C14orf145	145508	genome.wustl.edu	37	14	80971345	80971345	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	80971345	80971345	C	A	SNP	C14orf145	NM_152446	human	genbank	57_37b	-1	validated	nonsense	c.3091	p.E1031*	0.007	NULL	NULL	-	no_errors	
C16orf79	283870	genome.wustl.edu	37	16	2260649	2260649	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2260649	2260649	C	T	SNP	C16orf79	NM_182563	human	genbank	57_37b	-1	provisional	silent	c.54	p.V18	0.998	NULL	NULL	-	no_errors	
C19orf47	126526	genome.wustl.edu	37	19	40834429	40834429	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40834429	40834429	C	T	SNP	C19orf47	NM_178830	human	genbank	57_37b	-1	predicted	silent	c.240	p.L80	1.000	NULL	NULL	-	no_errors	
C22orf27	150291	genome.wustl.edu	37	22	31321948	31321948	+	RNA	SNP	G	G	A	rs2240176	byCluster;byFrequency;bySubmitter;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	31321948	31321948	G	A	SNP	C22orf27	NR_026920	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.004	-	-	-		
C4orf21	55345	genome.wustl.edu	37	4	113540297	113540297	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	113540297	113540297	C	G	SNP	C4orf21	ENST00000309071	human	ensembl	57_37b	-1	known	missense	c.901	p.E301Q	0.024	NULL	HMMPfam_DUF2439	-	no_errors	
C6orf150	115004	genome.wustl.edu	37	6	74135220	74135220	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	74135220	74135220	G	C	SNP	C6orf150	NM_138441	human	genbank	57_37b	-1	validated	missense	c.1299	p.F433L	1.000	NULL	NULL	-	no_errors	
C6orf97	80129	genome.wustl.edu	37	6	151907144	151907144	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	151907144	151907144	C	T	SNP	C6orf97	NM_025059	human	genbank	57_37b	+1	validated	nonsense	c.1213	p.Q405*	1.000	NULL	superfamily_Prefoldin	-	no_errors	
CASR	846	genome.wustl.edu	37	3	121975980	121975980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	121975980	121975980	G	A	SNP	CASR	NM_000388	human	genbank	57_37b	+1	reviewed	missense	c.238	p.E80K	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors	
CASZ1	54897	genome.wustl.edu	37	1	10720544	10720544	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	10720544	10720544	G	A	SNP	CASZ1	NM_001079843	human	genbank	57_37b	-1	validated	silent	c.555	p.F185	1.000	NULL	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
CATSPER2	117155	genome.wustl.edu	37	15	43932504	43932504	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43932504	43932504	C	G	SNP	CATSPER2	NM_172097	human	genbank	57_37b	-1	reviewed	silent	c.579	p.L193	0.008	NULL	NULL	-	no_errors	
CCDC47	57003	genome.wustl.edu	37	17	61838664	61838664	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61838664	61838664	G	A	SNP	CCDC47	NM_020198	human	genbank	57_37b	-1	validated	nonsense	c.595	p.Q199*	1.000	HMMPfam_DUF1682	HMMPfam_DUF1682	-	no_errors	
CCR2	1231	genome.wustl.edu	37	3	46399034	46399034	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	46399034	46399034	C	T	SNP	CCR2	NM_001123041	human	genbank	57_37b	+1	validated	missense	c.16	p.R6C	0.000	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
CD274	29126	genome.wustl.edu	37	9	5466805	5466805	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	5466805	5466805	G	C	SNP	CD274	NM_014143	human	genbank	57_37b	+1	provisional	missense	c.826	p.D276H	0.003	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMPfam_C2-set_2	-	no_errors	
CDCP1	64866	genome.wustl.edu	37	3	45127171	45127171	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	45127171	45127171	G	T	SNP	CDCP1	NM_022842	human	genbank	57_37b	-1	reviewed	missense	c.2470	p.P824T	0.977	NULL	superfamily_Spermadhesin CUB domain	-	no_errors	
CDR2	1039	genome.wustl.edu	37	16	22358885	22358885	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	22358885	22358885	C	T	SNP	CDR2	NM_001802	human	genbank	57_37b	-1	validated	missense	c.766	p.E256K	0.974	NULL	NULL	-	no_errors	
CEND1	51286	genome.wustl.edu	37	11	788469	788469	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	788469	788469	C	T	SNP	CEND1	NM_016564	human	genbank	57_37b	-1	reviewed	silent	c.108	p.L36	0.000	NULL	NULL	-	no_errors	
CENPJ	55835	genome.wustl.edu	37	13	25459796	25459796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	25459796	25459796	C	T	SNP	CENPJ	NM_018451	human	genbank	57_37b	-1	reviewed	missense	c.3314	p.R1105Q	0.127	NULL	HMMPfam_Tcp10_C	-	no_errors	
CFTR	1080	genome.wustl.edu	37	7	117188830	117188830	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	117188830	117188830	G	C	SNP	CFTR	NM_000492	human	genbank	57_37b	+1	reviewed	missense	c.1345	p.E449Q	1.000	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
CHCHD8	51287	genome.wustl.edu	37	11	73584201	73584201	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	73584201	73584201	C	T	SNP	CHCHD8	NM_016565	human	genbank	57_37b	-1	validated	missense	c.223	p.E75K	1.000	NULL	HMMPfam_CHCH	-	no_errors	
CHGB	1114	genome.wustl.edu	37	20	5904085	5904085	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	5904085	5904085	C	T	SNP	CHGB	NM_001819	human	genbank	57_37b	+1	reviewed	missense	c.1295	p.S432F	0.000	HMMPfam_Granin	HMMPfam_Granin,PatternScan_GRANINS_2,PatternScan_GRANINS_1	-	no_errors	
CLSTN1	22883	genome.wustl.edu	37	1	9809658	9809658	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	9809658	9809658	G	A	SNP	CLSTN1	NM_001009566	human	genbank	57_37b	-1	validated	silent	c.846	p.A282	0.006	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases	-	no_errors	
COL5A3	50509	genome.wustl.edu	37	19	10108093	10108093	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10108093	10108093	G	C	SNP	COL5A3	NM_015719	human	genbank	57_37b	-1	reviewed	nonsense	c.1217	p.S406*	0.691	HMMPfam_Collagen	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors	
CWC22	57703	genome.wustl.edu	37	2	180851479	180851479	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	180851479	180851479	C	G	SNP	CWC22	NM_020943	human	genbank	57_37b	-1	validated	missense	c.149	p.R50T	0.982	NULL	superfamily_ARM repeat,HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_MA3,HMMSmart_SM00544	-	no_errors	
CXXC4	80319	genome.wustl.edu	37	4	105412003	105412003	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	105412003	105412003	G	A	SNP	CXXC4	NM_025212	human	genbank	57_37b	-1	provisional	silent	c.450	p.N150	1.000	HMMPfam_zf-CXXC	HMMPfam_zf-CXXC	-	no_errors	
CXorf57	55086	genome.wustl.edu	37	X	105879798	105879798	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	105879798	105879798	G	C	SNP	CXorf57	NM_018015	human	genbank	57_37b	+1	validated	missense	c.1329	p.L443F	1.000	NULL	superfamily_Nucleic acid-binding proteins	-	no_errors	
CYP4Z1	199974	genome.wustl.edu	37	1	47581263	47581263	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	47581263	47581263	C	T	SNP	CYP4Z1	NM_178134	human	genbank	57_37b	+1	reviewed	nonsense	c.1264	p.Q422*	0.002	superfamily_Cytochrome_P450,HMMPfam_p450	superfamily_Cytochrome_P450,HMMPfam_p450,PatternScan_CYTOCHROME_P450	-	no_errors	
DCAF12L1	139170	genome.wustl.edu	37	X	125685470	125685470	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	125685470	125685470	G	C	SNP	DCAF12L1	NM_178470	human	genbank	57_37b	-1	reviewed	missense	c.1122	p.F374L	1.000	superfamily_WD40_like,HMMSmart_WD40	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
DCHS1	8642	genome.wustl.edu	37	11	6661191	6661191	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6661191	6661191	C	T	SNP	DCHS1	NM_003737	human	genbank	57_37b	-1	reviewed	missense	c.1654	p.D552N	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1	-	no_errors	
DCLRE1C	64421	genome.wustl.edu	37	10	14977484	14977484	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	14977484	14977484	C	G	SNP	DCLRE1C	NM_001033855	human	genbank	57_37b	-1	reviewed	missense	c.442	p.E148Q	1.000	superfamily_Metallo-hydrolase/oxidoreductase	superfamily_Metallo-hydrolase/oxidoreductase,HMMPfam_DRMBL	-	no_errors	
DCTN4	51164	genome.wustl.edu	37	5	150135984	150135984	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	150135984	150135984	C	G	SNP	DCTN4	NM_001135643	human	genbank	57_37b	-1	validated	missense	c.201	p.K67N	1.000	HMMPfam_Dynactin_p62	HMMPfam_Dynactin_p62	-	no_errors	
DDB1	1642	genome.wustl.edu	37	11	61099077	61099077	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61099077	61099077	G	A	SNP	DDB1	NM_001923	human	genbank	57_37b	-1	validated	missense	c.148	p.R50W	1.000	NULL	HMMPfam_CPSF_A	-	no_errors	
DDX42	11325	genome.wustl.edu	37	17	61895420	61895420	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61895420	61895420	C	T	SNP	DDX42	NM_007372	human	genbank	57_37b	+1	reviewed	missense	c.2479	p.R827W	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
DLG1	1739	genome.wustl.edu	37	3	197023229	197023229	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	197023229	197023229	G	A	SNP	DLG1	NM_004087	human	genbank	57_37b	-1	validated	nonsense	c.139	p.Q47*	1.000	HMMPfam_L27_1,superfamily_L27 domain,HMMSmart_SM00569	HMMPfam_L27_1,superfamily_L27 domain,HMMSmart_SM00569,HMMPfam_MAGUK_N_PEST,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_PDZ_assoc,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin,HMMPfam_Gua_kin_assoc_C	-	no_errors	
DMKN	93099	genome.wustl.edu	37	19	35990898	35990898	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	35990898	35990898	C	A	SNP	DMKN	NM_033317	human	genbank	57_37b	-1	reviewed	missense	c.1321	p.A441S	0.000	NULL	NULL	-	no_errors	
DNAH10	196385	genome.wustl.edu	37	12	124362321	124362321	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124362321	124362321	G	A	SNP	DNAH10	NM_207437	human	genbank	57_37b	+1	validated	silent	c.7884	p.L2628	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DNAH11	8701	genome.wustl.edu	37	7	21658797	21658797	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	21658797	21658797	G	A	SNP	DNAH11	NM_003777	human	genbank	57_37b	+1	reviewed	missense	c.4349	p.R1450Q	0.001	HMMPfam_DHC_N2	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	-	no_errors	
DOK6	220164	genome.wustl.edu	37	18	67068499	67068499	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	67068499	67068499	G	A	SNP	DOK6	NM_152721	human	genbank	57_37b	+1	validated	missense	c.19	p.D7N	1.000	superfamily_SSF50729	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_PTBI,HMMPfam_IRS	-	no_errors	
DSE	29940	genome.wustl.edu	37	6	116758321	116758321	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	116758321	116758321	C	T	SNP	DSE	NM_001080976	human	genbank	57_37b	+1	reviewed	missense	c.2690	p.S897F	0.904	NULL	NULL	-	no_errors	
DTWD1	56986	genome.wustl.edu	37	15	49935542	49935542	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	49935542	49935542	G	C	SNP	DTWD1	NM_001144955	human	genbank	57_37b	+1	validated	missense	c.682	p.E228Q	1.000	HMMPfam_DTW	HMMPfam_DTW	-	no_errors	
DYNC2H1	79659	genome.wustl.edu	37	11	103156999	103156999	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	103156999	103156999	C	G	SNP	DYNC2H1	NM_001080463	human	genbank	57_37b	+1	reviewed	missense	c.10927	p.L3643V	0.996	HMMPfam_Dynein_heavy	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
EGR1	1958	genome.wustl.edu	37	5	137802624	137802624	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	137802624	137802624	G	C	SNP	EGR1	NM_001964	human	genbank	57_37b	+1	reviewed	silent	c.486	p.V162	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ELL3	80237	genome.wustl.edu	37	15	44068711	44068711	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	44068711	44068711	C	T	SNP	ELL3	NM_025165	human	genbank	57_37b	-1	validated	missense	c.164	p.R55Q	1.000	HMMPfam_ELL	HMMPfam_ELL,HMMPfam_Occludin_ELL	-	no_errors	
ENPP2	5168	genome.wustl.edu	37	8	120602768	120602768	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	120602768	120602768	G	A	SNP	ENPP2	NM_006209	human	genbank	57_37b	-1	reviewed	missense	c.1340	p.S447F	0.995	superfamily_Alkaline phosphatase-like,HMMPfam_Phosphodiest	HMMSmart_SM00201,HMMPfam_Somatomedin_B,superfamily_Somatomedin B domain,PatternScan_SMB_1,superfamily_Alkaline phosphatase-like,HMMPfam_Phosphodiest,superfamily_His-Me finger endonucleases,HMMSmart_SM00477,HMMPfam_Endonuclease_NS	-	no_errors	
ENSG00000231972	0	genome.wustl.edu	37	15	92294289	92294289	+	Missense_Mutation	SNP	G	G	T	rs112265641	byCluster	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	92294289	92294289	G	T	SNP	ENSG00000231972	ENST00000419607	human	ensembl	57_37b	+1	known	missense	c.1338	p.R446S	0.000	NULL	NULL	-		
ENSG00000233696	0	genome.wustl.edu	37	8	676308	676308	+	Missense_Mutation	SNP	G	G	A	rs56948427	byCluster;byFrequency;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	676308	676308	G	A	SNP	ENSG00000233696	ENST00000436773	human	ensembl	57_37b	+1	known	missense	c.38	p.R13H	0.000	NULL	NULL	-		
ENSG00000245549	0	genome.wustl.edu	37	1	16950687	16950687	+	RNA	SNP	G	G	T	rs1762940	byCluster;by2Hit2Allele	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16950687	16950687	G	T	SNP	ENSG00000245549	ENST00000501442	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.003	-	-	-		
ENSG00000246466	0	genome.wustl.edu	37	11	95713222	95713222	+	RNA	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	95713222	95713222	C	G	SNP	ENSG00000246466	ENST00000501061	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
ENSG00000247599	0	genome.wustl.edu	37	1	212981266	212981266	+	RNA	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	212981266	212981266	G	T	SNP	ENSG00000247599	ENST00000499026	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	
ENSG00000247611	0	genome.wustl.edu	37	3	127292333	127292333	+	RNA	SNP	G	G	A	rs62264113	byCluster;byFrequency;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	127292333	127292333	G	A	SNP	ENSG00000247611	ENST00000501962	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-		
ENSG00000247772	0	genome.wustl.edu	37	11	47378477	47378478	+	RNA	DEL	CA	CA	-	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	CA	CA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47378477	47378478	CA	-	DEL	ENSG00000247772	ENST00000499849	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.186:0.183	-	-	(deletion:rna[47376886,47379300])	no_errors	
EPB41L5	57669	genome.wustl.edu	37	2	120848015	120848015	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	120848015	120848015	C	G	SNP	EPB41L5	NM_020909	human	genbank	57_37b	+1	provisional	missense	c.966	p.F322L	1.000	superfamily_PH domain-like,HMMPfam_FERM_C	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,HMMPfam_FA	-	no_errors	
EPHA5	2044	genome.wustl.edu	37	4	66201769	66201769	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	66201769	66201769	C	T	SNP	EPHA5	NM_004439	human	genbank	57_37b	-1	reviewed	missense	c.2733	p.M911I	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,HMMPfam_BmKX,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
EPS8	2059	genome.wustl.edu	37	12	15774268	15774268	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	15774268	15774268	C	-	DEL	EPS8	NM_004447	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.2452	p.E818fs	1.000	NULL	HMMSmart_PTB,superfamily_SSF50729,HMMPfam_PTB,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	(deletion:cds_exon[15774251,15774364])	no_errors	
EPS8	2059	genome.wustl.edu	37	12	15774271	15774271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	15774271	15774271	C	T	SNP	EPS8	NM_004447	human	genbank	57_37b	-1	reviewed	missense	c.2449	p.D817N	1.000	NULL	HMMSmart_PTB,superfamily_SSF50729,HMMPfam_PTB,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors	
ESYT1	23344	genome.wustl.edu	37	12	56526236	56526236	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56526236	56526236	G	A	SNP	ESYT1	NM_015292	human	genbank	57_37b	+1	provisional	missense	c.1016	p.R339Q	0.980	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
ETAA1	54465	genome.wustl.edu	37	2	67637053	67637053	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	67637053	67637053	G	C	SNP	ETAA1	NM_019002	human	genbank	57_37b	+1	validated	missense	c.2664	p.E888D	0.999	NULL	NULL	-	no_errors	
EVI5	7813	genome.wustl.edu	37	1	93170218	93170218	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	93170218	93170218	G	A	SNP	EVI5	NM_005665	human	genbank	57_37b	-1	validated	missense	c.365	p.S122L	1.000	NULL	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors	
FAM13C	220965	genome.wustl.edu	37	10	61029863	61029863	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	61029863	61029863	G	T	SNP	FAM13C	NM_001143773	human	genbank	57_37b	-1	validated	nonsense	c.350	p.S117*	0.001	NULL	NULL	-	no_errors	
FAM160A1	729830	genome.wustl.edu	37	4	152499108	152499108	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	152499108	152499108	C	T	SNP	FAM160A1	NM_001109977	human	genbank	57_37b	+1	predicted	silent	c.612	p.F204	1.000	HMMPfam_RAI16-like	HMMPfam_RAI16-like	-	no_errors	
FAM160A2	84067	genome.wustl.edu	37	11	6232761	6232761	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6232761	6232761	G	A	SNP	FAM160A2	NM_032127	human	genbank	57_37b	-1	validated	missense	c.2936	p.S979L	0.991	NULL	HMMPfam_RAI16-like	-	no_errors	
FAM189A1	23359	genome.wustl.edu	37	15	29415586	29415586	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	29415586	29415586	C	G	SNP	FAM189A1	NM_015307	human	genbank	57_37b	-1	validated	missense	c.1576	p.E526Q	0.885	NULL	NULL	-	no_errors	
FAM198A	0	genome.wustl.edu	37	3	43095171	43095171	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	43095171	43095171	G	C	SNP	FAM198A	ENST00000434206	human	ensembl	57_37b	+1	known	missense	c.1383	p.Q461H	0.002	NULL	PatternScan_TONB_DEPENDENT_REC_1	-	no_errors	
FAM35A	54537	genome.wustl.edu	37	10	88946909	88946909	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	88946909	88946909	G	A	SNP	FAM35A	NM_019054	human	genbank	57_37b	+1	validated	missense	c.2260	p.E754K	0.992	NULL	NULL	-	no_errors	
FAM83C	128876	genome.wustl.edu	37	20	33876299	33876299	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	33876299	33876299	G	A	SNP	FAM83C	NM_178468	human	genbank	57_37b	-1	validated	silent	c.771	p.L257	1.000	HMMPfam_DUF1669,superfamily_Phospholipase D/nuclease	HMMPfam_DUF1669,superfamily_Phospholipase D/nuclease	-	no_errors	
FARSB	10056	genome.wustl.edu	37	2	223464670	223464670	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	223464670	223464670	C	T	SNP	FARSB	NM_005687	human	genbank	57_37b	-1	reviewed	missense	c.1595	p.G532E	0.997	superfamily_Class II aaRS and biotin synthetases	superfamily_Putative DNA-binding domain,HMMPfam_B3_4,superfamily_B3/B4 domain of PheRS PheT,HMMPfam_B5,superfamily_Class II aaRS and biotin synthetases	-	no_errors	
FGD4	121512	genome.wustl.edu	37	12	32791666	32791666	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	32791666	32791666	G	A	SNP	FGD4	NM_139241	human	genbank	57_37b	+1	reviewed	silent	c.1980	p.Q660	1.000	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors	
FGFR4	2264	genome.wustl.edu	37	5	176519704	176519704	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176519704	176519704	G	A	SNP	FGFR4	NM_002011	human	genbank	57_37b	+1	reviewed	missense	c.976	p.E326K	1.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
FOXJ3	22887	genome.wustl.edu	37	1	42654583	42654583	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	42654583	42654583	C	G	SNP	FOXJ3	NM_014947	human	genbank	57_37b	-1	validated	missense	c.1470	p.M490I	1.000	NULL	"HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,PatternScan_FORK_HEAD_1,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors	
FRAS1	80144	genome.wustl.edu	37	4	79328836	79328836	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	79328836	79328836	G	A	SNP	FRAS1	NM_025074	human	genbank	57_37b	+1	reviewed	silent	c.4146	p.V1382	0.989	NULL	HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1,HMMPfam_VWC,superfamily_Growth factor receptor domain,HMMSmart_SM00261,HMMSmart_SM00181,HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors	
FSTL5	56884	genome.wustl.edu	37	4	162680647	162680647	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	162680647	162680647	C	G	SNP	FSTL5	NM_020116	human	genbank	57_37b	-1	validated	missense	c.643	p.D215H	1.000	superfamily_SSF47473	PatternScan_KAZAL,superfamily_SSF100895,HMMSmart_KAZAL,HMMPfam_Kazal_1,HMMPfam_efhand,superfamily_SSF47473,PatternScan_EF_HAND_1,superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMPfam_I-set,superfamily_Amine_DH_B_like	-	no_errors	
GAD1	2571	genome.wustl.edu	37	2	171709249	171709249	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	171709249	171709249	C	T	SNP	GAD1	NM_000817	human	genbank	57_37b	+1	reviewed	missense	c.1210	p.H404Y	1.000	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC	-	no_errors	
GAS6	2621	genome.wustl.edu	37	13	114529991	114529991	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	114529991	114529991	G	A	SNP	GAS6	NM_000820	human	genbank	57_37b	-1	reviewed	silent	c.1455	p.F485	0.998	superfamily_ConA_like_lec_gl	HMMSmart_GLA,superfamily_VitK_dep_GLA,HMMPfam_Gla,PatternScan_GLA_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF,HMMPfam_EGF_CA,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	-	no_errors	
GCC2	9648	genome.wustl.edu	37	2	109109048	109109048	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	109109048	109109048	G	C	SNP	GCC2	NM_181453	human	genbank	57_37b	+1	reviewed	missense	c.4249	p.E1417Q	1.000	NULL	HMMPfam_GRIP,HMMSmart_Grip	-	no_errors	
GIMAP1	170575	genome.wustl.edu	37	7	150417814	150417814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	150417814	150417814	G	A	SNP	GIMAP1	NM_130759	human	genbank	57_37b	+1	reviewed	missense	c.722	p.R241Q	0.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AIG1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AIG1	-	no_errors	
GLIS3	169792	genome.wustl.edu	37	9	4286347	4286347	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	4286347	4286347	G	A	SNP	GLIS3	NM_001042413	human	genbank	57_37b	-1	reviewed	missense	c.79	p.H27Y	0.976	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
GLRA1	2741	genome.wustl.edu	37	5	151231107	151231107	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	151231107	151231107	C	G	SNP	GLRA1	NM_000171	human	genbank	57_37b	-1	reviewed	silent	c.756	p.L252	1.000	superfamily_Neurotransmitter-gated ion-channel transmembrane pore	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors	
GNAO1	2775	genome.wustl.edu	37	16	56368657	56368657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	56368657	56368657	G	A	SNP	GNAO1	NM_020988	human	genbank	57_37b	+1	validated	missense	c.481	p.D161N	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_Transducin (alpha subunit) insertion domain	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_Transducin (alpha subunit) insertion domain	-	no_errors	
GON4L	54856	genome.wustl.edu	37	1	155721824	155721824	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155721824	155721824	C	A	SNP	GON4L	NM_001037533	human	genbank	57_37b	-1	validated	missense	c.6397	p.A2133S	0.703	superfamily_Homeodomain-like	superfamily_PAH2 domain,HMMPfam_PAH,superfamily_Homeodomain-like	-	no_errors	
GPR31	2853	genome.wustl.edu	37	6	167570935	167570935	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	167570935	167570935	G	C	SNP	GPR31	NM_005299	human	genbank	57_37b	-1	validated	missense	c.385	p.Q129E	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
GPR64	10149	genome.wustl.edu	37	X	19028892	19028892	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	19028892	19028892	G	A	SNP	GPR64	NM_001079858	human	genbank	57_37b	-1	validated	silent	c.1104	p.I368	0.013	NULL	HMMPfam_GPS,HMMSmart_SM00303,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors	
GPR83	10888	genome.wustl.edu	37	11	94129617	94129617	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	94129617	94129617	G	C	SNP	GPR83	NM_016540	human	genbank	57_37b	-1	validated	nonsense	c.461	p.S154*	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
HAP1	9001	genome.wustl.edu	37	17	39887784	39887784	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39887784	39887784	C	T	SNP	HAP1	NM_177977	human	genbank	57_37b	-1	reviewed	missense	c.1030	p.E344K	0.656	HMMPfam_HAP1_N	HMMPfam_HAP1_N	-	no_errors	
HDAC6	10013	genome.wustl.edu	37	X	48681327	48681327	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48681327	48681327	G	C	SNP	HDAC6	NM_006044	human	genbank	57_37b	+1	reviewed	missense	c.2518	p.E840Q	0.429	NULL	superfamily_SSF52768,HMMPfam_Hist_deacetyl,HMMSmart_ZnF_UBP,HMMPfam_zf-UBP	-	no_errors	
HECW2	57520	genome.wustl.edu	37	2	197105211	197105211	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	197105211	197105211	C	G	SNP	HECW2	NM_020760	human	genbank	57_37b	-1	provisional	missense	c.3726	p.Q1242H	1.000	superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119	HMMSmart_SM00239,HMMPfam_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
HEPACAM	220296	genome.wustl.edu	37	11	124805830	124805830	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	124805830	124805830	G	A	SNP	HEPACAM	NM_152722	human	genbank	57_37b	-1	validated	silent	c.73	p.L25	1.000	NULL	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
HIST1H2BI	8346	genome.wustl.edu	37	6	26273272	26273272	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26273272	26273272	G	A	SNP	HIST1H2BI	NM_003525	human	genbank	57_37b	+1	reviewed	silent	c.69	p.Q23	1.000	superfamily_Histone-fold	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone,PatternScan_HISTONE_H2B	-	no_errors	
HIST1H3F	8968	genome.wustl.edu	37	6	26250619	26250619	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26250619	26250619	A	G	SNP	HIST1H3F	NM_021018	human	genbank	57_37b	-1	reviewed	missense	c.215	p.V72A	1.000	superfamily_Histone-fold,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	superfamily_Histone-fold,PatternScan_HISTONE_H3_1,HMMSmart_SM00428,HMMPfam_Histone,PatternScan_HISTONE_H3_2	-	no_errors	
HMGCLL1	54511	genome.wustl.edu	37	6	55381378	55381378	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	55381378	55381378	C	T	SNP	HMGCLL1	NM_019036	human	genbank	57_37b	-1	validated	missense	c.411	p.M137I	1.000	superfamily_Aldolase,HMMPfam_HMGL-like	superfamily_Aldolase,HMMPfam_HMGL-like	-	no_errors	
HSD17B7	51478	genome.wustl.edu	37	1	162769553	162769553	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	162769553	162769553	C	G	SNP	HSD17B7	NM_016371	human	genbank	57_37b	+1	validated	silent	c.468	p.L156	0.551	superfamily_NAD(P)-binding Rossmann-fold domains	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short	-	no_errors	
HYDIN	54768	genome.wustl.edu	37	16	70884449	70884449	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70884449	70884449	C	T	SNP	HYDIN	NM_032821	human	genbank	57_37b	-1	validated	missense	c.12550	p.E4184K	0.831	NULL	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
HYLS1	219844	genome.wustl.edu	37	11	125769890	125769890	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	125769890	125769890	G	C	SNP	HYLS1	NM_001134793	human	genbank	57_37b	+1	reviewed	missense	c.627	p.K209N	0.125	NULL	NULL	-	no_errors	
ITIH5L	347365	genome.wustl.edu	37	X	54785121	54785121	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54785121	54785121	C	T	SNP	ITIH5L	NM_198510	human	genbank	57_37b	-1	reviewed	silent	c.1386	p.L462	1.000	superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	HMMSmart_VIT,HMMPfam_VIT,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_ITI_HC_C	-	no_errors	
KANK2	25959	genome.wustl.edu	37	19	11283661	11283661	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11283661	11283661	C	G	SNP	KANK2	NM_001136191	human	genbank	57_37b	-1	validated	missense	c.2207	p.S736T	1.000	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
KANK3	256949	genome.wustl.edu	37	19	8399284	8399284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8399284	8399284	C	T	SNP	KANK3	NM_198471	human	genbank	57_37b	-1	validated	missense	c.1347	p.M449I	1.000	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors	
KCNH7	90134	genome.wustl.edu	37	2	163241275	163241275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	163241275	163241275	G	A	SNP	KCNH7	NM_033272	human	genbank	57_37b	-1	reviewed	missense	c.2885	p.A962V	0.711	NULL	superfamily_PYP-like sensor domain (PAS domain),superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors	
KDM6B	23135	genome.wustl.edu	37	17	7754985	7754985	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7754985	7754985	G	A	SNP	KDM6B	NM_001080424	human	genbank	57_37b	+1	provisional	missense	c.4036	p.E1346K	1.000	HMMSmart_SM00558	HMMSmart_SM00558,HMMPfam_JmjC	-	no_errors	
KIAA1543	57662	genome.wustl.edu	37	19	7677124	7677124	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7677124	7677124	G	C	SNP	KIAA1543	NM_001080429	human	genbank	57_37b	+1	validated	missense	c.1826	p.G609A	0.000	NULL	superfamily_Calponin-homology domain CH-domain,superfamily_PRC-barrel domain,HMMPfam_DUF1781	-	no_errors	
KIAA2022	340533	genome.wustl.edu	37	X	73962610	73962610	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	73962610	73962610	C	G	SNP	KIAA2022	NM_001008537	human	genbank	57_37b	-1	validated	missense	c.1782	p.Q594H	1.000	NULL	NULL	-	no_errors	
KIF5C	3800	genome.wustl.edu	37	2	149835493	149835493	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	149835493	149835493	G	C	SNP	KIF5C	ENST00000435030	human	ensembl	57_37b	+1	known	missense	c.1351	p.D451H	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KIFC1	3833	genome.wustl.edu	37	6	33365888	33365888	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	33365888	33365888	G	T	SNP	KIFC1	NM_002263	human	genbank	57_37b	+1	validated	missense	c.95	p.G32V	0.027	NULL	superfamily_SSF52540,HMMSmart_KISc,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KLC2	64837	genome.wustl.edu	37	11	66026285	66026285	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66026285	66026285	G	A	SNP	KLC2	NM_001134775	human	genbank	57_37b	+1	validated	missense	c.220	p.E74K	1.000	HMMPfam_Rab5-bind	HMMPfam_Rab5-bind,superfamily_SSF48452,PatternScan_KINESIN_LIGHT,HMMPfam_TPR_1,HMMSmart_TPR	-	no_errors	
KNTC1	9735	genome.wustl.edu	37	12	123069500	123069500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	123069500	123069500	G	A	SNP	KNTC1	NM_014708	human	genbank	57_37b	+1	reviewed	missense	c.3497	p.R1166K	1.000	NULL	HMMPfam_Rod_C,PatternScan_BZIP_BASIC	-	no_errors	
KRTAP4-2	85291	genome.wustl.edu	37	17	39334385	39334385	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39334385	39334385	G	C	SNP	KRTAP4-2	NM_033062	human	genbank	57_37b	-1	reviewed	missense	c.32	p.S11C	0.902	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors	
KYNU	8942	genome.wustl.edu	37	2	143746426	143746426	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	143746426	143746426	C	G	SNP	KYNU	NM_001032998	human	genbank	57_37b	+1	reviewed	missense	c.915	p.F305L	0.000	NULL	superfamily_PyrdxlP-dep_Trfase_major	-	no_errors	
LAMB2	3913	genome.wustl.edu	37	3	49160162	49160162	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49160162	49160162	G	A	SNP	LAMB2	NM_002292	human	genbank	57_37b	-1	reviewed	silent	c.4548	p.I1516	1.000	NULL	HMMSmart_LamNT,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_SSF57196,PatternScan_EGF_1,PatternScan_EGF_LAM_1,PatternScan_EGF_2	-	no_errors	
LEPR	3953	genome.wustl.edu	37	1	66085699	66085699	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	66085699	66085699	C	T	SNP	LEPR	NM_002303	human	genbank	57_37b	+1	reviewed	silent	c.2484	p.F828	0.937	NULL	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_S_F1,HMMPfam_Lep_receptor_Ig,PatternScan_HEMATOPO_REC_L_F2	-	no_errors	
LOC100271715	0	genome.wustl.edu	37	2	39184142	39184142	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	39184142	39184142	C	T	SNP	LOC100271715	NM_001145451	human	genbank	57_37b	+1	validated	nonsense	c.1324	p.Q442*	1.000	superfamily_DBL homology domain (DH-domain)	superfamily_DBL homology domain (DH-domain),HMMSmart_SM00325	-	no_errors	
LOC100288882	0	genome.wustl.edu	37	2	32474920	32474920	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	32474920	32474920	C	G	SNP	LOC100288882	XM_002342199	human	genbank	57_37b	+1	model	missense	c.265	p.L89V	0.999	NULL	NULL	-	no_errors	
LOC100289488	0	genome.wustl.edu	37	1	201984496	201984496	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	201984496	201984496	C	T	SNP	LOC100289488	XM_002342157	human	genbank	57_37b	-1	model	silent	c.108	p.R36	0.003	NULL	NULL	-	no_errors	
LOC100290229	0	genome.wustl.edu	37	18	8276687	8276687	+	Missense_Mutation	SNP	A	A	G	rs72913140	byCluster;byFrequency;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	8276687	8276687	A	G	SNP	LOC100290229	XM_002347882	human	genbank	57_37b	+1	model	missense	c.91	p.I31V	0.000	NULL	NULL	-		
LOC202181	202181	genome.wustl.edu	37	5	177059383	177059383	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177059383	177059383	G	A	SNP	LOC202181	NR_026921	human	genbank	57_37b	-1	predicted	rna	NULL	NULL	0.532	-	-	-	no_errors	
LOC283116	283116	genome.wustl.edu	37	11	49055873	49055873	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	49055873	49055873	G	A	SNP	LOC283116	XM_208043	human	genbank	57_37b	+1	model	missense	c.683	p.G228E	0.001	NULL	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMPfam_zf-C3HC4,HMMSmart_RING,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMPfam_SPRY	-	no_errors	
LOC402679	402679	genome.wustl.edu	37	7	96488254	96488254	+	RNA	SNP	G	G	A	rs13233694	byCluster;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	96488254	96488254	G	A	SNP	LOC402679	XR_041896	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.000	-	-	-		
LOC644761	644761	genome.wustl.edu	37	15	59968888	59968888	+	RNA	SNP	A	A	G	rs6151525	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	59968888	59968888	A	G	SNP	LOC644761	XR_017557	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.001	-	-	-		
LRIG3	121227	genome.wustl.edu	37	12	59274492	59274492	+	Missense_Mutation	SNP	C	C	T	rs60376933	byCluster;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	59274492	59274492	C	T	SNP	LRIG3	NM_153377	human	genbank	57_37b	-1	provisional	missense	c.1672	p.E558K	1.000	HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_RNI-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00365,HMMSmart_SM00082,HMMPfam_LRRCT,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	-		
LRP2	4036	genome.wustl.edu	37	2	170097843	170097843	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170097843	170097843	C	T	SNP	LRP2	NM_004525	human	genbank	57_37b	-1	reviewed	missense	c.3700	p.E1234K	1.000	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_2,superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b,superfamily_SSF57196,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1	-	no_errors	
LRRC15	131578	genome.wustl.edu	37	3	194081543	194081543	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	194081543	194081543	G	A	SNP	LRRC15	NM_001135057	human	genbank	57_37b	-1	validated	missense	c.248	p.S83L	0.991	superfamily_L domain-like,HMMSmart_SM00369	superfamily_L domain-like,HMMSmart_SM00369,HMMSmart_SM00364,HMMPfam_LRR_1,HMMSmart_SM00365,HMMSmart_SM00082	-	no_errors	
LRRC45	201255	genome.wustl.edu	37	17	79986381	79986381	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79986381	79986381	G	A	SNP	LRRC45	NM_144999	human	genbank	57_37b	+1	provisional	missense	c.1234	p.E412K	1.000	NULL	superfamily_SSF52047	-	no_errors	
LRRC7	57554	genome.wustl.edu	37	1	70291445	70291445	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70291445	70291445	C	G	SNP	LRRC7	NM_020794	human	genbank	57_37b	+1	validated	missense	c.322	p.P108A	1.000	superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMSmart_SM00365,HMMPfam_LRR_1	superfamily_L domain-like,HMMSmart_SM00364,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_RNI-like,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors	
LRRN1	57633	genome.wustl.edu	37	3	3888343	3888343	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	3888343	3888343	C	G	SNP	LRRN1	NM_020873	human	genbank	57_37b	+1	validated	missense	c.2018	p.S673C	1.000	NULL	superfamily_SSF52058,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors	
MAP3K4	4216	genome.wustl.edu	37	6	161507647	161507647	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	161507647	161507647	C	A	SNP	MAP3K4	NM_005922	human	genbank	57_37b	+1	reviewed	nonsense	c.2504	p.S835*	0.134	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MDN1	23195	genome.wustl.edu	37	6	90406153	90406153	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90406153	90406153	C	T	SNP	MDN1	NM_014611	human	genbank	57_37b	-1	provisional	silent	c.9309	p.E3103	0.991	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_vWA-like,HMMSmart_SM00327	-	no_errors	
MED12	9968	genome.wustl.edu	37	X	70352039	70352039	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70352039	70352039	G	C	SNP	MED12	NM_005120	human	genbank	57_37b	+1	reviewed	missense	c.4236	p.K1412N	0.945	NULL	HMMPfam_Med12	-	no_errors	
METT11D1	64745	genome.wustl.edu	37	14	21460707	21460707	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	21460707	21460707	G	A	SNP	METT11D1	NM_001029991	human	genbank	57_37b	+1	validated	missense	c.454	p.E152K	1.000	HMMPfam_Rsm22	HMMPfam_Rsm22,superfamily_SSF53335	-	no_errors	
MIR513A1	0	genome.wustl.edu	37	X	146295084	146295084	+	RNA	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	146295084	146295084	C	T	SNP	MIR513A1	ENST00000385138	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.044	-	-	-	no_errors	
MLL	4297	genome.wustl.edu	37	11	118344572	118344572	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	118344572	118344572	C	T	SNP	MLL	NM_005933	human	genbank	57_37b	+1	validated	nonsense	c.2698	p.Q900*	0.998	NULL	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMPfam_zf-CXXC,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,PatternScan_RECR,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_FYRN,HMMSmart_SM00541,PatternScan_EF_HAND_1,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MLL3	58508	genome.wustl.edu	37	7	151945354	151945354	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	151945354	151945354	C	T	SNP	MLL3	NM_170606	human	genbank	57_37b	-1	reviewed	missense	c.2165	p.G722E	0.556	NULL	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,PatternScan_ATPASE_ALPHA_BETA,HMMSmart_SM00398,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MOGS	7841	genome.wustl.edu	37	2	74688908	74688908	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74688908	74688908	G	C	SNP	MOGS	NM_006302	human	genbank	57_37b	-1	reviewed	missense	c.2008	p.Q670E	1.000	HMMPfam_Glyco_hydro_63,superfamily_Six-hairpin glycosidases	HMMPfam_Glyco_hydro_63,superfamily_Six-hairpin glycosidases	-	no_errors	
MRPL53	116540	genome.wustl.edu	37	2	74699718	74699718	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74699718	74699718	C	G	SNP	MRPL53	NM_053050	human	genbank	57_37b	-1	reviewed	missense	c.70	p.E24Q	1.000	HMMPfam_MRP_L53	HMMPfam_MRP_L53	-	no_errors	
MRS2	57380	genome.wustl.edu	37	6	24416704	24416704	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	24416704	24416704	G	C	SNP	MRS2	NM_020662	human	genbank	57_37b	+1	validated	missense	c.799	p.E267Q	1.000	HMMPfam_CorA	HMMPfam_CorA	-	no_errors	
MTFR1	9650	genome.wustl.edu	37	8	66616961	66616961	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	66616961	66616961	A	G	SNP	MTFR1	NM_014637	human	genbank	57_37b	+1	reviewed	missense	c.314	p.D105G	0.275	HMMPfam_DUF729	HMMPfam_DUF729	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	9066267	9066267	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9066267	9066267	G	C	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	nonsense	c.21179	p.S7060*	0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MUC4	4585	genome.wustl.edu	37	3	195511634	195511634	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195511634	195511634	G	C	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	missense	c.6817	p.L2273V	0.033	NULL	HMMSmart_SM00539,HMMPfam_NIDO,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00723,HMMPfam_AMOP,HMMSmart_SM00216,HMMPfam_VWD,PatternScan_EGF_1,HMMSmart_SM00181,superfamily_EGF/Laminin	-	no_errors	
MYH1	4619	genome.wustl.edu	37	17	10404042	10404042	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10404042	10404042	G	C	SNP	MYH1	NM_005963	human	genbank	57_37b	-1	reviewed	missense	c.3766	p.L1256V	0.613	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
MYO3B	140469	genome.wustl.edu	37	2	171355142	171355142	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	171355142	171355142	G	C	SNP	MYO3B	NM_138995	human	genbank	57_37b	+1	validated	missense	c.3055	p.A1019P	0.799	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
MYT1	4661	genome.wustl.edu	37	20	62854671	62854671	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62854671	62854671	G	C	SNP	MYT1	NM_004535	human	genbank	57_37b	+1	reviewed	missense	c.2487	p.K829N	1.000	superfamily_SSF103637	superfamily_SSF103637,HMMPfam_zf-C2HC,HMMPfam_MYT1	-	no_errors	
N4BP2	55728	genome.wustl.edu	37	4	40124825	40124825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	40124825	40124825	C	T	SNP	N4BP2	NM_018177	human	genbank	57_37b	+1	reviewed	missense	c.4277	p.S1426F	1.000	NULL	superfamily_UBA-like,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_DUF1771,HMMSmart_SM00463,HMMPfam_Smr	-	no_errors	
N6AMT2	221143	genome.wustl.edu	37	13	21331700	21331700	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	21331700	21331700	G	C	SNP	N6AMT2	NM_174928	human	genbank	57_37b	-1	provisional	missense	c.38	p.S13C	0.878	NULL	HMMPfam_DPPF,PatternScan_N6_MTASE	-	no_errors	
NBPF1	55672	genome.wustl.edu	37	1	16892212	16892212	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16892212	16892212	C	G	SNP	NBPF1	NM_017940	human	genbank	57_37b	-1	predicted	missense	c.2932	p.E978Q	0.000	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors	
NCF2	4688	genome.wustl.edu	37	1	183559438	183559438	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	183559438	183559438	G	C	SNP	NCF2	NM_000433	human	genbank	57_37b	-1	reviewed	silent	c.27	p.L9	0.995	superfamily_SSF48452	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF54277,HMMPfam_PB1,HMMSmart_PB1	-	no_errors	
NCOA2	10499	genome.wustl.edu	37	8	71068737	71068737	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	71068737	71068737	C	T	SNP	NCOA2	NM_006540	human	genbank	57_37b	-1	validated	silent	c.1863	p.V621	0.014	NULL	superfamily_HLH_basic,HMMSmart_HLH,HMMPfam_PAS,HMMSmart_PAS,superfamily_SSF55785,HMMSmart_PAC,HMMPfam_SRC-1,superfamily_Nuc_recept_coact,HMMPfam_Nuc_rec_co-act,HMMPfam_DUF1518	-	no_errors	
NDFIP2	54602	genome.wustl.edu	37	13	80125187	80125187	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	80125187	80125187	C	G	SNP	NDFIP2	NM_019080	human	genbank	57_37b	+1	validated	missense	c.943	p.L315V	0.994	HMMPfam_DUF2370	HMMPfam_DUF2370	-	no_errors	
NEO1	4756	genome.wustl.edu	37	15	73562365	73562365	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	73562365	73562365	G	A	SNP	NEO1	NM_002499	human	genbank	57_37b	+1	validated	missense	c.2509	p.D837N	1.000	NULL	PatternScan_TONB_DEPENDENT_REC_1,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_Neogenin_C	-	no_errors	
NPHS1	4868	genome.wustl.edu	37	19	36336322	36336322	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36336322	36336322	G	A	SNP	NPHS1	NM_004646	human	genbank	57_37b	-1	reviewed	silent	c.1878	p.H626	1.000	superfamily_Immunoglobulin,HMMPfam_C2-set_2,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
NRK	203447	genome.wustl.edu	37	X	105193653	105193653	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	105193653	105193653	C	T	SNP	NRK	NM_198465	human	genbank	57_37b	+1	validated	silent	c.4440	p.A1480	0.202	HMMSmart_SM00036,HMMPfam_CNH	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00219,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_p53-like transcription factors,HMMSmart_SM00036,HMMPfam_CNH	-	no_errors	
NRXN3	9369	genome.wustl.edu	37	14	79270156	79270156	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	79270156	79270156	G	A	SNP	NRXN3	NM_004796	human	genbank	57_37b	+1	reviewed	missense	c.1119	p.M373I	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,HMMSmart_LamG,HMMSmart_EGF,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMSmart_4.1m	-	no_errors	
NT5E	4907	genome.wustl.edu	37	6	86176793	86176793	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	86176793	86176793	G	C	SNP	NT5E	NM_002526	human	genbank	57_37b	+1	validated	missense	c.355	p.E119Q	1.000	superfamily_SSF56300,HMMPfam_Metallophos,PatternScan_5_NUCLEOTIDASE_2	superfamily_SSF56300,PatternScan_5_NUCLEOTIDASE_1,HMMPfam_Metallophos,PatternScan_5_NUCLEOTIDASE_2,HMMPfam_5_nucleotid_C,superfamily_5apos-Nucleotdase_C	-	no_errors	
NUAK2	81788	genome.wustl.edu	37	1	205273335	205273335	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205273335	205273335	G	T	SNP	NUAK2	NM_030952	human	genbank	57_37b	-1	provisional	missense	c.1130	p.S377Y	1.000	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
NUP210L	91181	genome.wustl.edu	37	1	154030634	154030634	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154030634	154030634	G	A	SNP	NUP210L	NM_207308	human	genbank	57_37b	-1	validated	missense	c.3038	p.P1013L	0.996	NULL	superfamily_Invasin_intimin,HMMSmart_BID_2,HMMPfam_Big_2	-	no_errors	
NXF3	56000	genome.wustl.edu	37	X	102338141	102338141	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	102338141	102338141	C	G	SNP	NXF3	NM_022052	human	genbank	57_37b	-1	reviewed	missense	c.601	p.E201Q	0.068	NULL	superfamily_RNA-binding domain RBD,HMMPfam_Tap-RNA_bind,superfamily_NTF2-like,HMMPfam_NTF2	-	no_errors	
ODF2	4957	genome.wustl.edu	37	9	131262505	131262505	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131262505	131262505	C	A	SNP	ODF2	NM_002540	human	genbank	57_37b	+1	reviewed	missense	c.2389	p.P797T	1.000	NULL	NULL	-	no_errors	
OR12D3	81797	genome.wustl.edu	37	6	29342825	29342825	+	Silent	SNP	G	G	A	rs115388145	byCluster;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29342825	29342825	G	A	SNP	OR12D3	NM_030959	human	genbank	57_37b	-1	provisional	silent	c.240	p.L80	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
OR2B2	81697	genome.wustl.edu	37	6	27879431	27879431	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27879431	27879431	G	C	SNP	OR2B2	NM_033057	human	genbank	57_37b	-1	validated	missense	c.667	p.Q223E	0.243	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2T34	127068	genome.wustl.edu	37	1	248737567	248737567	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248737567	248737567	G	A	SNP	OR2T34	NM_001001821	human	genbank	57_37b	-1	provisional	silent	c.492	p.L164	0.002	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR4E2	26686	genome.wustl.edu	37	14	22133492	22133492	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	22133492	22133492	C	T	SNP	OR4E2	NM_001001912	human	genbank	57_37b	+1	validated	silent	c.196	p.L66	0.999	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR5W2	390148	genome.wustl.edu	37	11	55681414	55681414	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55681414	55681414	G	A	SNP	OR5W2	NM_001001960	human	genbank	57_37b	-1	provisional	silent	c.645	p.F215	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OSBPL3	26031	genome.wustl.edu	37	7	24874204	24874204	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	24874204	24874204	C	A	SNP	OSBPL3	NM_015550	human	genbank	57_37b	-1	reviewed	silent	c.1647	p.L549	0.912	HMMPfam_Oxysterol_BP	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Oxysterol_BP,PatternScan_OSBP	-	no_errors	
PAF1	54623	genome.wustl.edu	37	19	39876572	39876572	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39876572	39876572	G	A	SNP	PAF1	ENST00000221266	human	ensembl	57_37b	-1	known	silent	c.1372	p.L458	0.778	NULL	HMMPfam_Paf1	-	no_errors	
PARP9	83666	genome.wustl.edu	37	3	122247483	122247483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	122247483	122247483	C	T	SNP	PARP9	NM_031458	human	genbank	57_37b	-1	validated	missense	c.2293	p.E765K	1.000	superfamily_ADP-ribosylation,HMMPfam_PARP	superfamily_Macro domain-like,HMMSmart_SM00506,HMMPfam_Macro,superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors	
PAX5	5079	genome.wustl.edu	37	9	36923468	36923468	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	36923468	36923468	G	A	SNP	PAX5	NM_016734	human	genbank	57_37b	-1	reviewed	missense	c.794	p.S265L	1.000	NULL	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like,PatternScan_PAIRED_1	-	no_errors	
PBRM1	55193	genome.wustl.edu	37	3	52668737	52668737	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52668737	52668737	C	G	SNP	PBRM1	NM_018165	human	genbank	57_37b	-1	validated	missense	c.1086	p.R362S	1.000	HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_Bromodomain	superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1,HMMPfam_BAH,HMMSmart_BAH,superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors	
PCDHA10	56139	genome.wustl.edu	37	5	140235680	140235680	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140235680	140235680	C	G	SNP	PCDHA10	NM_018901	human	genbank	57_37b	+1	reviewed	missense	c.47	p.S16W	0.000	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHB1	29930	genome.wustl.edu	37	5	140432874	140432874	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140432874	140432874	C	G	SNP	PCDHB1	NM_013340	human	genbank	57_37b	+1	reviewed	missense	c.1819	p.L607V	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMSmart_CA,HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PDZD2	23037	genome.wustl.edu	37	5	32091263	32091263	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32091263	32091263	G	A	SNP	PDZD2	NM_178140	human	genbank	57_37b	+1	reviewed	missense	c.7709	p.R2570K	0.847	NULL	superfamily_PDZ domain-like,HMMSmart_SM00228,HMMPfam_PDZ,PatternScan_PROTEIN_KINASE_ATP	-	no_errors	
PGM3	5238	genome.wustl.edu	37	6	83896771	83896771	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	83896771	83896771	T	G	SNP	PGM3	NM_015599	human	genbank	57_37b	-1	provisional	missense	c.413	p.Q138P	0.933	superfamily_Phosphoglucomutase first 3 domains,HMMPfam_PGM_PMM_I	PatternScan_PGM_PMM,HMMPfam_PGM_PMM_I,superfamily_Phosphoglucomutase first 3 domains,superfamily_Phosphoglucomutase C-terminal domain,HMMPfam_PGM_PMM_IV	-	no_errors	
PHC3	80012	genome.wustl.edu	37	3	169847254	169847254	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169847254	169847254	G	A	SNP	PHC3	NM_024947	human	genbank	57_37b	-1	validated	nonsense	c.1006	p.Q336*	1.000	NULL	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
PIM3	415116	genome.wustl.edu	37	22	50356707	50356707	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	50356707	50356707	G	A	SNP	PIM3	NM_001001852	human	genbank	57_37b	+1	validated	missense	c.913	p.D305N	0.980	superfamily_Kinase_like	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
PION	54103	genome.wustl.edu	37	7	77011930	77011930	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77011930	77011930	G	C	SNP	PION	NM_017439	human	genbank	57_37b	-1	validated	missense	c.487	p.L163V	0.005	NULL	NULL	-	no_errors	
PKD1L1	168507	genome.wustl.edu	37	7	47840422	47840422	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	47840422	47840422	G	A	SNP	PKD1L1	NM_138295	human	genbank	57_37b	-1	reviewed	missense	c.8018	p.S2673F	0.000	HMMPfam_PKD_channel	HMMSmart_SM00089,superfamily_PKD domain,HMMPfam_PKD,HMMPfam_REJ,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308,HMMPfam_PKD_channel	-	no_errors	
PLAC1L	219990	genome.wustl.edu	37	11	59814505	59814505	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59814505	59814505	G	A	SNP	PLAC1L	NM_173801	human	genbank	57_37b	+1	provisional	missense	c.436	p.E146K	0.999	NULL	NULL	-	no_errors	
PLD1	5337	genome.wustl.edu	37	3	171442510	171442510	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	171442510	171442510	C	T	SNP	PLD1	NM_002662	human	genbank	57_37b	-1	validated	missense	c.734	p.R245K	1.000	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Phospholipase D/nuclease,HMMPfam_PLDc,HMMSmart_SM00155	-	no_errors	
PLEKHO2	80301	genome.wustl.edu	37	15	65157503	65157503	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	65157503	65157503	G	A	SNP	PLEKHO2	NM_025201	human	genbank	57_37b	+1	validated	missense	c.889	p.E297K	0.406	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
POLR3E	55718	genome.wustl.edu	37	16	22337444	22337444	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	22337444	22337444	C	T	SNP	POLR3E	NM_018119	human	genbank	57_37b	+1	validated	nonsense	c.1711	p.Q571*	0.998	NULL	HMMPfam_Sin_N	-	no_errors	
POM121L12	285877	genome.wustl.edu	37	7	53104112	53104112	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	53104112	53104112	G	A	SNP	POM121L12	NM_182595	human	genbank	57_37b	+1	validated	missense	c.748	p.D250N	0.000	NULL	NULL	-	no_errors	
POTEC	388468	genome.wustl.edu	37	18	14538183	14538183	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	14538183	14538183	C	T	SNP	POTEC	NM_001137671	human	genbank	57_37b	-1	validated	missense	c.587	p.R196Q	0.907	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	-	no_errors	
PPEF2	5470	genome.wustl.edu	37	4	76811237	76811237	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	76811237	76811237	G	C	SNP	PPEF2	NM_006239	human	genbank	57_37b	-1	reviewed	missense	c.290	p.S97C	0.004	HMMPfam_PPP5	HMMPfam_IQ,HMMPfam_PPP5,superfamily_Metallo-dependent phosphatases,HMMSmart_SM00156,HMMPfam_Metallophos,PatternScan_SER_THR_PHOSPHATASE,HMMSmart_SM00054,superfamily_EF-hand,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors	
PPP2R3C	55012	genome.wustl.edu	37	14	35554936	35554936	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	35554936	35554936	G	C	SNP	PPP2R3C	NM_017917	human	genbank	57_37b	-1	provisional	missense	c.1222	p.L408V	1.000	superfamily_EF-hand	superfamily_EF-hand,PatternScan_EF_HAND_1	-	no_errors	
PPP2R3C	55012	genome.wustl.edu	37	14	35568480	35568480	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	35568480	35568480	G	C	SNP	PPP2R3C	NM_017917	human	genbank	57_37b	-1	provisional	missense	c.684	p.F228L	1.000	superfamily_EF-hand	PatternScan_EF_HAND_1,superfamily_EF-hand	-	no_errors	
PRSSL1	400668	genome.wustl.edu	37	19	694935	694935	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	694935	694935	C	G	SNP	PRSSL1	NM_214710	human	genbank	57_37b	-1	validated	missense	c.115	p.E39Q	0.306	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS	-	no_errors	
PTCHD2	57540	genome.wustl.edu	37	1	11584097	11584097	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	11584097	11584097	G	A	SNP	PTCHD2	NM_020780	human	genbank	57_37b	+1	validated	missense	c.2461	p.E821K	0.779	HMMPfam_Patched	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors	
PTPN22	26191	genome.wustl.edu	37	1	114380586	114380586	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114380586	114380586	G	C	SNP	PTPN22	NM_015967	human	genbank	57_37b	-1	reviewed	missense	c.1436	p.S479C	0.057	NULL	superfamily_SSF52799,HMMSmart_PTPc,HMMPfam_Y_phosphatase,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
PTPN22	26191	genome.wustl.edu	37	1	114380881	114380881	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114380881	114380881	G	C	SNP	PTPN22	NM_015967	human	genbank	57_37b	-1	reviewed	missense	c.1141	p.L381V	0.484	NULL	HMMPfam_Y_phosphatase,HMMSmart_PTPc,PatternScan_TYR_PHOSPHATASE_1,superfamily_SSF52799	-	no_errors	
PTPRD	5789	genome.wustl.edu	37	9	8485307	8485307	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	8485307	8485307	G	C	SNP	PTPRD	NM_002839	human	genbank	57_37b	-1	reviewed	missense	c.3073	p.H1025D	1.000	HMMSmart_SM00060,superfamily_Fibronectin type III	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors	
RAB23	51715	genome.wustl.edu	37	6	57061379	57061379	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	57061379	57061379	G	A	SNP	RAB23	NM_016277	human	genbank	57_37b	-1	reviewed	silent	c.267	p.F89	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00176	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00176	-	no_errors	
RAB40AL	0	genome.wustl.edu	37	X	102192645	102192645	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	102192645	102192645	G	C	SNP	RAB40AL	NM_001031834	human	genbank	57_37b	+1	provisional	missense	c.399	p.K133N	1.000	superfamily_SSF52540,HMMSmart_RAB,HMMPfam_Ras	superfamily_SSF52540,HMMSmart_RAB,HMMPfam_Ras,HMMSmart_SOCS,HMMPfam_SOCS_box	-	no_errors	
RABEP2	79874	genome.wustl.edu	37	16	28931193	28931193	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28931193	28931193	C	G	SNP	RABEP2	NM_024816	human	genbank	57_37b	-1	validated	missense	c.346	p.E116Q	0.999	HMMPfam_Rabaptin	HMMPfam_Rabaptin,PatternScan_ODR_DC_2_2,HMMPfam_Rab5-bind	-	no_errors	
RANBP2	5903	genome.wustl.edu	37	2	109380099	109380099	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	109380099	109380099	C	G	SNP	RANBP2	NM_006267	human	genbank	57_37b	+1	reviewed	nonsense	c.3104	p.S1035*	1.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,superfamily_SSF50729,HMMSmart_RanBD,HMMPfam_Ran_BP1,HMMPfam_zf-RanBP,HMMSmart_ZnF_RBZ,PatternScan_ZF_RANBP2_1,superfamily_CSA_PPIase,HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1	-	no_errors	
RAPGEF2	9693	genome.wustl.edu	37	4	160264511	160264511	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	160264511	160264511	G	A	SNP	RAPGEF2	NM_014247	human	genbank	57_37b	+1	validated	missense	c.2726	p.R909Q	1.000	superfamily_Ras_GEF,HMMSmart_RasGEF	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,superfamily_Ras_GEF,HMMSmart_RasGEFN,HMMPfam_RasGEF_N,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ,HMMPfam_RA,HMMSmart_RA,HMMSmart_RasGEF,HMMPfam_RasGEF	-	no_errors	
RDH5	5959	genome.wustl.edu	37	12	56118164	56118164	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56118164	56118164	G	A	SNP	RDH5	NM_002905	human	genbank	57_37b	+1	reviewed	silent	c.792	p.V264	1.000	superfamily_NAD(P)-bd	PatternScan_ADH_SHORT,superfamily_NAD(P)-bd,HMMPfam_adh_short	-	no_errors	
RDX	5962	genome.wustl.edu	37	11	110104054	110104054	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	110104054	110104054	C	G	SNP	RDX	NM_002906	human	genbank	57_37b	-1	reviewed	missense	c.1495	p.E499Q	1.000	HMMPfam_ERM,superfamily_Moesin tail domain	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,HMMPfam_ERM,superfamily_Moesin tail domain	-	no_errors	
RGS14	10636	genome.wustl.edu	37	5	176799049	176799049	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176799049	176799049	G	C	SNP	RGS14	NM_006480	human	genbank	57_37b	+1	reviewed	missense	c.1674	p.L558F	0.000	NULL	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315,superfamily_Ubiquitin-like,HMMPfam_RBD,HMMSmart_SM00455,HMMPfam_GoLoco,HMMSmart_SM00390	-	no_errors	
RIC8A	60626	genome.wustl.edu	37	11	209437	209437	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	209437	209437	G	T	SNP	RIC8A	NM_021932	human	genbank	57_37b	+1	provisional	nonsense	c.163	p.E55*	1.000	NULL	HMMPfam_Ric8	-	no_errors	
ROCK2	9475	genome.wustl.edu	37	2	11332346	11332346	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	11332346	11332346	C	G	SNP	ROCK2	NM_004850	human	genbank	57_37b	-1	reviewed	missense	c.4091	p.R1364T	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C,HMMPfam_HR1,HMMPfam_Rho_Binding,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Cysteine-rich domain,HMMPfam_C1_1,HMMSmart_SM00109	-	no_errors	
ROR1	4919	genome.wustl.edu	37	1	64624667	64624667	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	64624667	64624667	C	G	SNP	ROR1	NM_005012	human	genbank	57_37b	+1	validated	nonsense	c.1178	p.S393*	0.990	superfamily_Kringle-like,HMMSmart_SM00130	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Fz,superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
RTN3	10313	genome.wustl.edu	37	11	63486546	63486546	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	63486546	63486546	C	A	SNP	RTN3	NM_201428	human	genbank	57_37b	+1	validated	nonsense	c.515	p.S172*	0.002	NULL	HMMPfam_Reticulon	-	no_errors	
S1PR3	1903	genome.wustl.edu	37	9	91616385	91616385	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	91616385	91616385	C	G	SNP	S1PR3	NM_005226	human	genbank	57_37b	+1	reviewed	missense	c.270	p.I90M	0.014	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
SALL2	6297	genome.wustl.edu	37	14	21991732	21991732	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	21991732	21991732	G	A	SNP	SALL2	NM_005407	human	genbank	57_37b	-1	validated	silent	c.2130	p.V710	0.997	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
SAMD9L	219285	genome.wustl.edu	37	7	92763064	92763064	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	92763064	92763064	G	A	SNP	SAMD9L	NM_152703	human	genbank	57_37b	-1	validated	missense	c.2221	p.H741Y	1.000	NULL	superfamily_SAM/Pointed domain	-	no_errors	
SETD2	29072	genome.wustl.edu	37	3	47165587	47165587	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47165587	47165587	G	C	SNP	SETD2	NM_014159	human	genbank	57_37b	-1	reviewed	nonsense	c.539	p.S180*	0.856	NULL	PatternScan_ADH_IRON_1,superfamily_Ferritin-like,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,HMMPfam_SRI_2	-	no_errors	
SFRS16	11129	genome.wustl.edu	37	19	45572374	45572374	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	45572374	45572374	G	A	SNP	SFRS16	NM_007056	human	genbank	57_37b	+1	validated	missense	c.1819	p.E607K	1.000	NULL	HMMPfam_DRY_EERY	-	no_errors	
SHISA7	0	genome.wustl.edu	37	19	55948979	55948979	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55948979	55948979	C	T	SNP	SHISA7	NM_001145176	human	genbank	57_37b	-1	validated	silent	c.969	p.K323	0.963	NULL	NULL	-	no_errors	
SIRPB2	55423	genome.wustl.edu	37	20	1460486	1460486	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1460486	1460486	C	T	SNP	SIRPB2	NM_001122962	human	genbank	57_37b	-1	validated	missense	c.310	p.E104K	0.013	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408	-	no_errors	
SLC24A6	80024	genome.wustl.edu	37	12	113754439	113754439	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113754439	113754439	G	A	SNP	SLC24A6	NM_024959	human	genbank	57_37b	-1	validated	silent	c.885	p.F295	0.004	NULL	HMMPfam_Na_Ca_ex	-	no_errors	
SLC25A41	284427	genome.wustl.edu	37	19	6427163	6427163	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6427163	6427163	C	G	SNP	SLC25A41	NM_173637	human	genbank	57_37b	-1	validated	missense	c.891	p.Q297H	1.000	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	-	no_errors	
SLC34A3	142680	genome.wustl.edu	37	9	140130606	140130606	+	Missense_Mutation	SNP	A	A	T	rs28542318	byCluster;byFrequency;by1000genomes	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	140130606	140130606	A	T	SNP	SLC34A3	NM_080877	human	genbank	57_37b	+1	validated	missense	c.1538	p.E513V	1.000	NULL	HMMPfam_Na_Pi_cotrans	-		
SLC39A13	91252	genome.wustl.edu	37	11	47434989	47434989	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47434989	47434989	C	G	SNP	SLC39A13	NM_001128225	human	genbank	57_37b	+1	validated	silent	c.576	p.L192	0.957	HMMPfam_Zip	HMMPfam_Zip	-	no_errors	
SLC6A7	6534	genome.wustl.edu	37	5	149576681	149576681	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	149576681	149576681	C	G	SNP	SLC6A7	NM_014228	human	genbank	57_37b	+1	validated	missense	c.426	p.F142L	1.000	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors	
SLC8A1	6546	genome.wustl.edu	37	2	40655984	40655984	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	40655984	40655984	G	C	SNP	SLC8A1	NM_021097	human	genbank	57_37b	-1	validated	missense	c.1437	p.I479M	1.000	HMMPfam_Calx-beta,HMMSmart_SM00237	HMMPfam_Na_Ca_ex,HMMPfam_Calx-beta,HMMSmart_SM00237	-	no_errors	
SLFN11	91607	genome.wustl.edu	37	17	33690742	33690742	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33690742	33690742	C	G	SNP	SLFN11	NM_001104587	human	genbank	57_37b	-1	validated	missense	c.85	p.E29Q	0.191	NULL	HMMPfam_AAA_4,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
SMCHD1	23347	genome.wustl.edu	37	18	2700630	2700630	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	2700630	2700630	G	A	SNP	SMCHD1	NM_015295	human	genbank	57_37b	+1	validated	missense	c.1436	p.R479Q	1.000	NULL	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_HATPase_c,superfamily_Smc hinge domain,HMMPfam_SMC_hinge	-	no_errors	
SMEK2	57223	genome.wustl.edu	37	2	55791554	55791554	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55791554	55791554	C	T	SNP	SMEK2	NM_001122964	human	genbank	57_37b	-1	validated	missense	c.2155	p.E719K	1.000	NULL	superfamily_PH domain-like,superfamily_ARM repeat,HMMPfam_DUF625	-	no_errors	
SNCAIP	9627	genome.wustl.edu	37	5	121785558	121785558	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	121785558	121785558	C	G	SNP	SNCAIP	NM_005460	human	genbank	57_37b	+1	reviewed	silent	c.1611	p.V537	1.000	superfamily_ANK	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-	no_errors	
SOS1	6654	genome.wustl.edu	37	2	39214691	39214691	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	39214691	39214691	C	T	SNP	SOS1	NM_005633	human	genbank	57_37b	-1	reviewed	missense	c.3433	p.D1145N	1.000	NULL	superfamily_Histone-fold,HMMPfam_Histone,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMSmart_SM00147,HMMPfam_RasGEF,PatternScan_RASGEF	-	no_errors	
SOX3	6658	genome.wustl.edu	37	X	139586809	139586809	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	139586809	139586809	C	T	SNP	SOX3	NM_005634	human	genbank	57_37b	-1	reviewed	silent	c.417	p.V139	0.994	superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors	
SOX9	6662	genome.wustl.edu	37	17	70120527	70120527	+	Nonstop_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	70120527	70120527	G	C	SNP	SOX9	NM_000346	human	genbank	57_37b	+1	reviewed	nonstop	c.1529	p.*510S	1.000	NULL	superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box	-	no_errors	
SPEN	23013	genome.wustl.edu	37	1	16260482	16260482	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16260482	16260482	G	T	SNP	SPEN	NM_015001	human	genbank	57_37b	+1	reviewed	nonsense	c.7747	p.E2583*	0.915	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,superfamily_SPOC-like,HMMPfam_SPOC	-	no_errors	
SPHK2	56848	genome.wustl.edu	37	19	49132338	49132338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49132338	49132338	C	T	SNP	SPHK2	NM_020126	human	genbank	57_37b	+1	provisional	missense	c.1273	p.L425F	0.998	NULL	HMMPfam_DAGK_cat,HMMSmart_SM00046	-	no_errors	
SPIN1	10927	genome.wustl.edu	37	9	91090081	91090081	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	91090081	91090081	G	A	SNP	SPIN1	NM_006717	human	genbank	57_37b	+1	validated	silent	c.678	p.S226	0.006	HMMPfam_Spin-Ssty	HMMPfam_Spin-Ssty	-	no_errors	
SSTR3	6753	genome.wustl.edu	37	22	37602828	37602828	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	37602828	37602828	C	T	SNP	SSTR3	NM_001051	human	genbank	57_37b	-1	reviewed	missense	c.1015	p.E339K	1.000	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
STK17B	9262	genome.wustl.edu	37	2	197010664	197010664	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	197010664	197010664	G	A	SNP	STK17B	NM_004226	human	genbank	57_37b	-1	validated	nonsense	c.451	p.Q151*	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
STX3	6809	genome.wustl.edu	37	11	59554516	59554516	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59554516	59554516	G	A	SNP	STX3	NM_004177	human	genbank	57_37b	+1	provisional	missense	c.121	p.E41K	1.000	HMMSmart_SM00503,superfamily_t-snare proteins,HMMPfam_Syntaxin	HMMSmart_SM00503,superfamily_t-snare proteins,HMMPfam_Syntaxin,HMMSmart_SM00397,HMMPfam_SNARE,PatternScan_SYNTAXIN	-	no_errors	
STX3	6809	genome.wustl.edu	37	11	59554572	59554572	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59554572	59554572	C	G	SNP	STX3	NM_004177	human	genbank	57_37b	+1	provisional	silent	c.177	p.L59	0.953	HMMPfam_Syntaxin,HMMSmart_SM00503,superfamily_t-snare proteins	HMMPfam_SNARE,HMMSmart_SM00397,HMMPfam_Syntaxin,HMMSmart_SM00503,PatternScan_SYNTAXIN,superfamily_t-snare proteins	-	no_errors	
SYCP2	10388	genome.wustl.edu	37	20	58441426	58441426	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	58441426	58441426	G	C	SNP	SYCP2	NM_014258	human	genbank	57_37b	-1	reviewed	missense	c.4242	p.F1414L	0.981	NULL	NULL	-	no_errors	
SYNE2	23224	genome.wustl.edu	37	14	64496655	64496655	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	64496655	64496655	T	A	SNP	SYNE2	NM_182914	human	genbank	57_37b	+1	reviewed	missense	c.6757	p.S2253T	0.082	HMMPfam_Spectrin,superfamily_Spectrin,HMMSmart_SPEC	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Spectrin,HMMSmart_SPEC,HMMPfam_Spectrin,superfamily_4_helix_cytokine,HMMPfam_KASH	-	no_errors	
SYNE2	23224	genome.wustl.edu	37	14	64630264	64630264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	64630264	64630264	G	A	SNP	SYNE2	NM_182914	human	genbank	57_37b	+1	reviewed	missense	c.16444	p.E5482K	1.000	NULL	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_CH,HMMPfam_Spectrin,superfamily_4_helix_cytokine,HMMPfam_KASH,superfamily_Calponin-homology,HMMSmart_SPEC,superfamily_Spectrin	-	no_errors	
TAF5	6877	genome.wustl.edu	37	10	105143101	105143101	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105143101	105143101	C	T	SNP	TAF5	NM_006951	human	genbank	57_37b	+1	reviewed	silent	c.1641	p.Y547	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMPfam_TFIID_90kDa,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
TBC1D15	64786	genome.wustl.edu	37	12	72307641	72307641	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	72307641	72307641	C	G	SNP	TBC1D15	NM_022771	human	genbank	57_37b	+1	reviewed	missense	c.1387	p.L463V	1.000	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors	
TBCC	6903	genome.wustl.edu	37	6	42713653	42713653	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	42713653	42713653	C	G	SNP	TBCC	NM_003192	human	genbank	57_37b	-1	reviewed	missense	c.159	p.E53D	0.993	NULL	HMMPfam_TBCC,HMMSmart_SM00673	-	no_errors	
TCF21	6943	genome.wustl.edu	37	6	134212887	134212887	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	134212887	134212887	G	A	SNP	TCF21	NM_003206	human	genbank	57_37b	+1	reviewed	missense	c.487	p.D163N	1.000	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors	
TET2	54790	genome.wustl.edu	37	4	106196474	106196474	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	106196474	106196474	C	T	SNP	TET2	NM_001127208	human	genbank	57_37b	+1	validated	nonsense	c.4807	p.Q1603*	0.997	NULL	NULL	-	no_errors	
TLE6	79816	genome.wustl.edu	37	19	2987056	2987056	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	2987056	2987056	G	C	SNP	TLE6	NM_001143986	human	genbank	57_37b	+1	validated	missense	c.361	p.E121Q	0.000	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320	-	no_errors	
TMEM145	284339	genome.wustl.edu	37	19	42818951	42818951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42818951	42818951	C	T	SNP	TMEM145	NM_173633	human	genbank	57_37b	+1	validated	missense	c.368	p.S123L	0.998	NULL	HMMPfam_GpcrRhopsn4	-	no_errors	
TMEM145	284339	genome.wustl.edu	37	19	42819033	42819033	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42819033	42819033	C	G	SNP	TMEM145	ENST00000406159	human	ensembl	57_37b	+1	known	silent	c.450	p.L150	1.000	NULL	HMMPfam_GpcrRhopsn4	-	no_errors	
TMEM82	388595	genome.wustl.edu	37	1	16074093	16074093	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16074093	16074093	C	T	SNP	TMEM82	NM_001013641	human	genbank	57_37b	+1	provisional	missense	c.998	p.S333L	0.001	NULL	NULL	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578235	7578235	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578235	7578235	T	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.614	p.Y205C	0.989	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRIM59	286827	genome.wustl.edu	37	3	160155837	160155837	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	160155837	160155837	G	A	SNP	TRIM59	NM_173084	human	genbank	57_37b	-1	validated	silent	c.1135	p.L379	0.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,superfamily_B-box zinc-binding domain	-	no_errors	
TSTA3	7264	genome.wustl.edu	37	8	144696575	144696575	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	144696575	144696575	G	C	SNP	TSTA3	NM_003313	human	genbank	57_37b	-1	reviewed	silent	c.513	p.T171	1.000	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Epimerase	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Epimerase	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179429698	179429698	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179429698	179429698	C	G	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.73451	p.G24484A	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179456070	179456070	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179456070	179456070	C	T	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.52672	p.E17558K	1.000	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179650716	179650716	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179650716	179650716	G	A	SNP	TTN	NM_133379	human	genbank	57_37b	-1	reviewed	silent	c.2229	p.A743	0.001	NULL	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_Titin_Z,HMMPfam_ig,PatternScan_IG_MHC,PatternScan_THIOL_PROTEASE_HIS	-	no_errors	
TUBB3	10381	genome.wustl.edu	37	16	90001832	90001832	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	90001832	90001832	G	C	SNP	TUBB3	NM_006086	human	genbank	57_37b	+1	validated	missense	c.973	p.E325Q	1.000	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	PatternScan_TUBULIN_B_AUTOREG,superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_errors	
TUBGCP6	85378	genome.wustl.edu	37	22	50658734	50658734	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	50658734	50658734	G	C	SNP	TUBGCP6	NM_020461	human	genbank	57_37b	-1	reviewed	missense	c.4054	p.P1352A	0.000	HMMPfam_Spc97_Spc98	HMMPfam_Spc97_Spc98	-	no_errors	
UBA1	7317	genome.wustl.edu	37	X	47070624	47070624	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47070624	47070624	G	A	SNP	UBA1	NM_003334	human	genbank	57_37b	+1	reviewed	missense	c.2464	p.D822N	1.000	superfamily_MoeB	superfamily_MoeB,HMMPfam_ThiF,PatternScan_UBIQUITIN_ACTIVAT_1,HMMPfam_UBA_e1_thiolCys,PatternScan_UBIQUITIN_ACTIVAT_2,HMMPfam_UBACT,HMMPfam_UBA_e1_C	-	no_errors	
UBA6	55236	genome.wustl.edu	37	4	68539460	68539460	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	68539460	68539460	C	G	SNP	UBA6	NM_018227	human	genbank	57_37b	-1	validated	missense	c.501	p.Q167H	0.998	superfamily_Activating enzymes of the ubiquitin-like proteins,HMMPfam_ThiF	superfamily_Activating enzymes of the ubiquitin-like proteins,HMMPfam_ThiF,HMMPfam_UBA_e1_thiolCys,HMMPfam_UBACT,HMMPfam_UBA_e1_C	-	no_errors	
UBR4	23352	genome.wustl.edu	37	1	19464532	19464532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	19464532	19464532	C	T	SNP	UBR4	NM_020765	human	genbank	57_37b	-1	validated	missense	c.8875	p.E2959K	1.000	NULL	superfamily_ARM repeat,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-UBR,HMMSmart_SM00396,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors	
UNC119B	84747	genome.wustl.edu	37	12	121151105	121151105	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	121151105	121151105	C	G	SNP	UNC119B	NM_001080533	human	genbank	57_37b	+1	provisional	missense	c.273	p.I91M	1.000	superfamily_Ig_E-set,HMMPfam_GMP_PDE_delta	superfamily_Ig_E-set,HMMPfam_GMP_PDE_delta	-	no_errors	
USH1C	10083	genome.wustl.edu	37	11	17531162	17531162	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	17531162	17531162	G	A	SNP	USH1C	NM_153676	human	genbank	57_37b	-1	reviewed	missense	c.1754	p.S585F	0.084	NULL	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors	
USP34	9736	genome.wustl.edu	37	2	61468708	61468708	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	61468708	61468708	G	A	SNP	USP34	NM_014709	human	genbank	57_37b	-1	validated	missense	c.6764	p.S2255L	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors	
USP38	84640	genome.wustl.edu	37	4	144119005	144119005	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	144119005	144119005	G	A	SNP	USP38	NM_032557	human	genbank	57_37b	+1	validated	silent	c.978	p.V326	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors	
USP4	7375	genome.wustl.edu	37	3	49348063	49348063	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	49348063	49348063	G	C	SNP	USP4	NM_003363	human	genbank	57_37b	-1	validated	missense	c.944	p.S315C	1.000	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1	HMMSmart_SM00695,HMMPfam_DUF1055,superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors	
USP53	54532	genome.wustl.edu	37	4	120190905	120190905	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	120190905	120190905	C	G	SNP	USP53	NM_019050	human	genbank	57_37b	+1	validated	missense	c.1348	p.L450V	0.942	NULL	superfamily_SSF54001,HMMPfam_UCH	-	no_errors	
UTRN	7402	genome.wustl.edu	37	6	144780060	144780060	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	144780060	144780060	C	T	SNP	UTRN	NM_007124	human	genbank	57_37b	+1	reviewed	silent	c.2439	p.V813	0.005	superfamily_Spectrin,HMMPfam_Spectrin,HMMSmart_SPEC	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,HMMPfam_Spectrin,superfamily_Spectrin,HMMSmart_SPEC,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_SSF47473,HMMPfam_efhand_1,HMMPfam_efhand_2,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1	-	no_errors	
VCAN	1462	genome.wustl.edu	37	5	82817735	82817735	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	82817735	82817735	C	G	SNP	VCAN	NM_004385	human	genbank	57_37b	+1	reviewed	missense	c.3610	p.P1204A	0.645	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,superfamily_C-type lectin-like,HMMSmart_SM00445,HMMPfam_Xlink,PatternScan_LINK_1,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
VCP	7415	genome.wustl.edu	37	9	35059573	35059573	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35059573	35059573	G	A	SNP	VCP	NM_007126	human	genbank	57_37b	-1	reviewed	nonsense	c.1921	p.Q641*	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	superfamily_ADC-like,HMMPfam_CDC48_N,superfamily_Cdc48 domain 2-like,HMMPfam_CDC48_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
WASF1	8936	genome.wustl.edu	37	6	110434565	110434565	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	110434565	110434565	C	G	SNP	WASF1	NM_001024934	human	genbank	57_37b	-1	reviewed	missense	c.232	p.V78L	1.000	NULL	HMMPfam_WH2,HMMSmart_SM00246	-	no_errors	
WDFY3	23001	genome.wustl.edu	37	4	85674919	85674919	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	85674919	85674919	C	T	SNP	WDFY3	NM_014991	human	genbank	57_37b	-1	reviewed	missense	c.5670	p.M1890I	1.000	NULL	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cyclin-like,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors	
WDR7	23335	genome.wustl.edu	37	18	54424178	54424178	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	54424178	54424178	C	G	SNP	WDR7	NM_015285	human	genbank	57_37b	+1	reviewed	nonsense	c.2354	p.S785*	1.000	NULL	HMMSmart_SM00320,HMMPfam_WD40,superfamily_Prolyl oligopeptidase N-terminal domain,PatternScan_WD_REPEATS_1,superfamily_WD40 repeat-like	-	no_errors	
WFDC6	140870	genome.wustl.edu	37	20	44163071	44163071	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44163071	44163071	G	A	SNP	WFDC6	ENST00000372665	human	ensembl	57_37b	-1	known	missense	c.469	p.P157S	0.001	NULL	HMMPfam_WAP,HMMSmart_WAP,HMMSmart_KU,HMMPfam_Kunitz_BPTI,superfamily_Prot_inh_Kunz-m	-	no_errors	
XRCC4	7518	genome.wustl.edu	37	5	82554427	82554427	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	82554427	82554427	G	A	SNP	XRCC4	NM_022406	human	genbank	57_37b	+1	reviewed	missense	c.824	p.R275Q	0.983	HMMPfam_XRCC4	superfamily_XRCC4 N-terminal domain,HMMPfam_XRCC4	-	no_errors	
YME1L1	10730	genome.wustl.edu	37	10	27412521	27412521	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	27412521	27412521	C	G	SNP	YME1L1	NM_139312	human	genbank	57_37b	-1	reviewed	missense	c.1228	p.E410Q	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,HMMPfam_Peptidase_M41	-	no_errors	
ZCWPW1	55063	genome.wustl.edu	37	7	100016703	100016703	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100016703	100016703	G	T	SNP	ZCWPW1	ENST00000429012	human	ensembl	57_37b	-1	known	nonsense	c.392	p.S131*	0.000	NULL	NULL	-	no_errors	
ZDHHC11	79844	genome.wustl.edu	37	5	837564	837564	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	837564	837564	G	C	SNP	ZDHHC11	NM_024786	human	genbank	57_37b	-1	validated	silent	c.816	p.L272	0.000	NULL	HMMPfam_zf-DHHC	-	no_errors	
ZDHHC12	84885	genome.wustl.edu	37	9	131484019	131484019	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131484019	131484019	C	T	SNP	ZDHHC12	NM_032799	human	genbank	57_37b	-1	validated	silent	c.393	p.E131	1.000	HMMPfam_zf-DHHC	HMMPfam_zf-DHHC	-	no_errors	
ZFC3H1	196441	genome.wustl.edu	37	12	72026676	72026676	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	72026676	72026676	T	C	SNP	ZFC3H1	NM_144982	human	genbank	57_37b	-1	validated	missense	c.2807	p.D936G	1.000	NULL	HMMPfam_zf-C3H1,superfamily_Protein prenylyltransferase,HMMSmart_SM00386	-	no_errors	
ZNF236	7776	genome.wustl.edu	37	18	74611135	74611135	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	74611135	74611135	C	T	SNP	ZNF236	NM_007345	human	genbank	57_37b	+1	validated	silent	c.1845	p.V615	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF358	140467	genome.wustl.edu	37	19	7585539	7585539	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7585539	7585539	C	G	SNP	ZNF358	NM_018083	human	genbank	57_37b	+1	validated	missense	c.1411	p.L471V	0.000	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF446	55663	genome.wustl.edu	37	19	58991184	58991184	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58991184	58991184	C	T	SNP	ZNF446	ENST00000391694	human	ensembl	57_37b	+1	known	silent	c.291	p.T97	0.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF556	80032	genome.wustl.edu	37	19	2877800	2877800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	2877800	2877800	G	A	SNP	ZNF556	NM_024967	human	genbank	57_37b	+1	provisional	missense	c.844	p.A282T	0.995	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF585B	92285	genome.wustl.edu	37	19	37676240	37676240	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37676240	37676240	C	G	SNP	ZNF585B	NM_152279	human	genbank	57_37b	-1	validated	missense	c.2199	p.L733F	0.058	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF638	27332	genome.wustl.edu	37	2	71591252	71591252	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	71591252	71591252	C	T	SNP	ZNF638	NM_001014972	human	genbank	57_37b	+1	reviewed	silent	c.1587	p.F529	0.358	NULL	HMMSmart_SM00451,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
ZNF671	79891	genome.wustl.edu	37	19	58232983	58232983	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58232983	58232983	G	C	SNP	ZNF671	NM_024833	human	genbank	57_37b	-1	validated	silent	c.471	p.L157	0.000	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF821	55565	genome.wustl.edu	37	16	71894091	71894091	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71894091	71894091	C	G	SNP	ZNF821	NM_017530	human	genbank	57_37b	-1	provisional	missense	c.943	p.E315Q	1.000	NULL	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2	-	no_errors	
ZNF821	55565	genome.wustl.edu	37	16	71895828	71895828	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AR-A0TX-01	TCGA-AR-A0TX-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	71895828	71895828	C	T	SNP	ZNF821	NM_017530	human	genbank	57_37b	-1	provisional	silent	c.309	p.V103	1.000	superfamily_SSF57667	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors	
