Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABHD2	11057	genome.wustl.edu	37	15	89698616	89698616	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	89698616	89698616	T	A	SNP	ABHD2	NM_007011	human	genbank	57_37b	+1	reviewed	missense	c.389	p.I130N	1.000	superfamily_SSF53474	superfamily_SSF53474,HMMPfam_Abhydrolase_1,PatternScan_UPF0017	-	no_errors	
ANKRD13D	338692	genome.wustl.edu	37	11	67057824	67057824	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67057824	67057824	C	T	SNP	ANKRD13D	ENST00000447274	human	ensembl	57_37b	+1	known	silent	c.258	p.P86	0.001	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_UIM,HMMSmart_SM00726	-	no_errors	
ARMET	7873	genome.wustl.edu	37	3	51423726	51423726	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51423726	51423726	T	C	SNP	ARMET	ENST00000438713	human	ensembl	57_37b	+1	known	missense	c.173	p.I58T	0.190	HMMPfam_Armet	HMMPfam_Armet	-	no_errors	
ATHL1	80162	genome.wustl.edu	37	11	289924	289924	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	289924	289924	T	A	SNP	ATHL1	NM_025092	human	genbank	57_37b	+1	validated	missense	c.108	p.F36L	0.753	NULL	superfamily_Six-hairpin glycosidases,HMMPfam_Glyco_hydro_65m	-	no_errors	
C15orf39	56905	genome.wustl.edu	37	15	75501096	75501096	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75501096	75501096	C	T	SNP	C15orf39	NM_015492	human	genbank	57_37b	+1	validated	missense	c.2707	p.R903C	1.000	NULL	NULL	-	no_errors	
C19orf38	255809	genome.wustl.edu	37	19	10973880	10973880	+	Silent	SNP	C	C	G	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10973880	10973880	C	G	SNP	C19orf38	NM_001136482	human	genbank	57_37b	+1	predicted	silent	c.540	p.S180	0.003	NULL	superfamily_SSF48726	-	no_errors	
C21orf81	114035	genome.wustl.edu	37	21	15352253	15352253	+	RNA	SNP	A	C	C	rs56270809	byCluster;by1000genomes	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	15352253	15352253	A	C	SNP	C21orf81	NR_027270	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.003	-	-	-		
C2orf39	92749	genome.wustl.edu	37	2	26671656	26671656	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	26671656	26671656	C	T	SNP	C2orf39	NM_145038	human	genbank	57_37b	+1	validated	silent	c.1494	p.L498	0.012	NULL	NULL	-	no_errors	
CYP17A1	1586	genome.wustl.edu	37	10	104590523	104590523	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104590523	104590523	G	T	SNP	CYP17A1	NM_000102	human	genbank	57_37b	-1	reviewed	missense	c.1463	p.S488Y	0.892	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors	
ENSG00000214331	0	genome.wustl.edu	37	16	74386002	74386002	+	Silent	SNP	A	A	G	rs2549101	byCluster	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	74386002	74386002	A	G	SNP	ENSG00000214331	ENST00000429810	human	ensembl	57_37b	-1	known	silent	c.543	p.P181	0.014	superfamily_SSF51905,HMMPfam_DAO	superfamily_SSF51905,HMMPfam_DAO	-		
FAM175B	23172	genome.wustl.edu	37	10	126523295	126523295	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	126523295	126523295	C	T	SNP	FAM175B	NM_032182	human	genbank	57_37b	+1	validated	nonsense	c.1003	p.Q335*	1.000	NULL	NULL	-	no_errors	
FAM21C	253725	genome.wustl.edu	37	10	46282632	46282632	+	Silent	SNP	T	T	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46282632	46282632	T	C	SNP	FAM21C	NM_015262	human	genbank	57_37b	+1	validated	silent	c.2955	p.S985	0.088	NULL	NULL	-	no_errors	
FAT2	2196	genome.wustl.edu	37	5	150948446	150948446	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	150948446	150948446	G	A	SNP	FAT2	NM_001447	human	genbank	57_37b	-1	reviewed	missense	c.47	p.A16V	0.000	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors	
FGFR2	2263	genome.wustl.edu	37	10	123239386	123239386	+	Silent	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	123239386	123239386	G	A	SNP	FGFR2	NM_022970	human	genbank	57_37b	-1	reviewed	silent	c.2454	p.G818	1.000	NULL	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMPfam_I-set,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
GPR142	350383	genome.wustl.edu	37	17	72368642	72368642	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72368642	72368642	A	G	SNP	GPR142	NM_181790	human	genbank	57_37b	+1	provisional	missense	c.1292	p.D431G	0.059	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
KRT8P12	0	genome.wustl.edu	37	3	160285898	160285898	+	Silent	SNP	C	C	T	rs4679895	byCluster;by1000genomes	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	160285898	160285898	C	T	SNP	KRT8P12	ENST00000427889	human	ensembl	57_37b	+1	known	silent	c.75	p.I25	1.000	NULL	HMMPfam_Filament	-		
LOC100132672	0	genome.wustl.edu	37	9	69501969	69501969	+	RNA	SNP	C	C	A	rs7040086	byCluster;by2Hit2Allele;byHapMap	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	69501969	69501969	C	A	SNP	LOC100132672	XR_038504	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-		
LOC285780	285780	genome.wustl.edu	37	6	6347590	6347590	+	RNA	SNP	C	C	G	rs9392769	byCluster;byFrequency;by1000genomes	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	6347590	6347590	C	G	SNP	LOC285780	NR_026970	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.022	-	-	-		
LOC392232	0	genome.wustl.edu	37	8	73115028	73115028	+	RNA	SNP	G	G	A	rs7818339	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	73115028	73115028	G	A	SNP	LOC392232	XR_037363	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.320	-	-	-		
LOC644936	644936	genome.wustl.edu	37	5	79596274	79596274	+	RNA	SNP	C	T	T	rs35486429	byCluster;by1000genomes	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	79596274	79596274	C	T	SNP	LOC644936	NR_004845	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	1.000	-	-	-		
LOC729806	729806	genome.wustl.edu	37	1	247353330	247353330	+	Missense_Mutation	SNP	T	T	C	rs4351686	byCluster;byFrequency;by1000genomes	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	247353330	247353330	T	C	SNP	LOC729806	XM_002342180	human	genbank	57_37b	-1	model	missense	c.1702	p.T568A	0.007	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-		
NAV3	89795	genome.wustl.edu	37	12	78388624	78388624	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	78388624	78388624	T	C	SNP	NAV3	NM_014903	human	genbank	57_37b	+1	validated	missense	c.713	p.I238T	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	-	no_errors	
NDUFS7	374291	genome.wustl.edu	37	19	1387829	1387829	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	1387829	1387829	C	-	DEL	NDUFS7	NM_024407	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.36	p.R13fs	0.000	NULL	superfamily_Nickel-iron hydrogenase small subunit,HMMPfam_Oxidored_q6,PatternScan_COMPLEX1_20K	(deletion:cds_exon[1387810,1387846])	no_errors	
NEDD9	4739	genome.wustl.edu	37	6	11193886	11193886	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	11193886	11193886	C	T	SNP	NEDD9	NM_001142393	human	genbank	57_37b	-1	validated	missense	c.499	p.E167K	1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_Serine_rich	-	no_errors	
NOX1	27035	genome.wustl.edu	37	X	100103700	100103700	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100103700	100103700	A	C	SNP	NOX1	NM_007052	human	genbank	57_37b	-1	reviewed	missense	c.1487	p.V496G	0.975	superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors	
PCDHB5	26167	genome.wustl.edu	37	5	140515898	140515898	+	Silent	SNP	C	T	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140515898	140515898	C	T	SNP	PCDHB5	NM_015669	human	genbank	57_37b	+1	reviewed	silent	c.882	p.D294	0.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178922328	178922328	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178922328	178922328	C	G	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1097	p.P366R	1.000	HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIPSL	266971	genome.wustl.edu	37	10	95721080	95721080	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	95721080	95721080	C	T	SNP	PIPSL	ENST00000340582	human	ensembl	57_37b	-1	known	missense	c.74	p.G25E	0.993	superfamily_SSF56104	superfamily_SSF56104,HMMSmart_PIPKc,HMMPfam_PIP5K,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_UIM	-	no_errors	
PLCB3	5331	genome.wustl.edu	37	11	64022269	64022269	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64022269	64022269	G	A	SNP	PLCB3	NM_000932	human	genbank	57_37b	+1	provisional	missense	c.227	p.R76Q	0.998	NULL	superfamily_EF-hand,HMMPfam_efhand_like,HMMSmart_SM00148,HMMPfam_PI-PLC-X,superfamily_PLC-like phosphodiesterases,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMPfam_PLC-beta_C	-	no_errors	
PLXNA4	91584	genome.wustl.edu	37	7	131870086	131870086	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	131870086	131870086	G	A	SNP	PLXNA4	NM_020911	human	genbank	57_37b	-1	validated	missense	c.3130	p.R1044W	1.000	HMMSmart_SM00429,HMMPfam_TIG,superfamily_E set domains	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors	
POPDC2	64091	genome.wustl.edu	37	3	119378920	119378920	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119378920	119378920	C	T	SNP	POPDC2	NM_022135	human	genbank	57_37b	-1	reviewed	silent	c.351	p.L117	1.000	HMMPfam_Popeye	HMMPfam_Popeye,superfamily_cAMP-binding domain-like	-	no_errors	
PPEF1	5475	genome.wustl.edu	37	X	18824537	18824537	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	18824537	18824537	C	T	SNP	PPEF1	NM_006240	human	genbank	57_37b	+1	reviewed	missense	c.1268	p.S423F	1.000	superfamily_Metallo-dependent phosphatases,HMMSmart_SM00156	HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_PPP5,superfamily_Metallo-dependent phosphatases,HMMSmart_SM00156,HMMPfam_Metallophos,PatternScan_SER_THR_PHOSPHATASE,HMMSmart_SM00054,HMMPfam_efhand,superfamily_EF-hand,PatternScan_EF_HAND_1	-	no_errors	
PPP1R12B	4660	genome.wustl.edu	37	1	202318211	202318211	+	Silent	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	202318211	202318211	C	T	SNP	PPP1R12B	NM_032105	human	genbank	57_37b	+1	reviewed	silent	c.232	p.L78	0.965	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
RYR2	6262	genome.wustl.edu	37	1	237656376	237656376	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	237656376	237656376	C	A	SNP	RYR2	NM_001035	human	genbank	57_37b	+1	reviewed	missense	c.1950	p.N650K	1.000	HMMPfam_RYDR_ITPR	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
SEMA4F	10505	genome.wustl.edu	37	2	74907173	74907173	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	74907173	74907173	C	T	SNP	SEMA4F	NM_004263	human	genbank	57_37b	+1	provisional	missense	c.2150	p.P717L	1.000	NULL	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat	-	no_errors	
SH3PXD2A	9644	genome.wustl.edu	37	10	105362895	105362895	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105362895	105362895	T	C	SNP	SH3PXD2A	NM_014631	human	genbank	57_37b	-1	validated	missense	c.1996	p.I666V	0.982	NULL	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
SHROOM4	57477	genome.wustl.edu	37	X	50350796	50350796	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	50350796	50350796	G	A	SNP	SHROOM4	NM_020717	human	genbank	57_37b	-1	reviewed	missense	c.3346	p.R1116C	0.256	NULL	superfamily_PDZ domain-like,HMMSmart_SM00228,HMMPfam_ASD1,HMMPfam_ASD2	-	no_errors	
SLC17A6	57084	genome.wustl.edu	37	11	22360147	22360147	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	22360147	22360147	C	T	SNP	SLC17A6	NM_020346	human	genbank	57_37b	+1	validated	missense	c.68	p.S23L	1.000	NULL	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
SLC30A10	55532	genome.wustl.edu	37	1	220089131	220089131	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	220089131	220089131	G	A	SNP	SLC30A10	NM_018713	human	genbank	57_37b	-1	validated	missense	c.1118	p.A373V	0.048	HMMPfam_Cation_efflux	HMMPfam_Cation_efflux	-	no_errors	
SNX1	6642	genome.wustl.edu	37	15	64428587	64428587	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	64428587	64428587	G	A	SNP	SNX1	NM_003099	human	genbank	57_37b	+1	reviewed	missense	c.1424	p.R475Q	1.000	HMMPfam_Vps5	HMMPfam_Sorting_nexin,superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,HMMPfam_Vps5	-	no_errors	
SOCS6	9306	genome.wustl.edu	37	18	67992682	67992682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	67992682	67992682	C	T	SNP	SOCS6	NM_004232	human	genbank	57_37b	+1	reviewed	missense	c.778	p.R260C	0.000	NULL	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,HMMSmart_SOCS,HMMPfam_SOCS_box	-	no_errors	
SYT16	83851	genome.wustl.edu	37	14	62547865	62547865	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	62547865	62547865	G	A	SNP	SYT16	NM_031914	human	genbank	57_37b	+1	validated	missense	c.1307	p.R436H	1.000	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors	
TMEM80	283232	genome.wustl.edu	37	11	700143	700143	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	700143	700143	T	C	SNP	TMEM80	NM_001042463	human	genbank	57_37b	+1	provisional	missense	c.116	p.L39P	1.000	NULL	HMMPfam_Transmemb_17	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578458	7578458	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578458	7578458	G	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.472	p.R158G	0.981	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
WHSC1	7468	genome.wustl.edu	37	4	1980493	1980493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-BH-A0BT-01	TCGA-BH-A0BT-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	1980493	1980493	G	A	SNP	WHSC1	NM_001042424	human	genbank	57_37b	+1	reviewed	missense	c.3955	p.G1319R	1.000	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
