Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ARHGAP17	55114	genome.wustl.edu	37	16	24942551	24942551	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	24942551	24942551	G	A	SNP	ARHGAP17	NM_001006634	human	genbank	57_37b	-1	validated	missense	c.2069	p.S690F	0.003	NULL	HMMPfam_BAR,HMMSmart_SM00721,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,PatternScan_AA_TRNA_LIGASE_I	-	no_errors	
BBS5	129880	genome.wustl.edu	37	2	170343618	170343618	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170343618	170343618	C	T	SNP	BBS5	NM_152384	human	genbank	57_37b	+1	reviewed	missense	c.182	p.S61F	1.000	HMMPfam_DUF1448,HMMSmart_SM00683	HMMPfam_DUF1448,HMMSmart_SM00683	-	no_errors	
BMP2	650	genome.wustl.edu	37	20	6758938	6758938	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	6758938	6758938	A	T	SNP	BMP2	NM_001200	human	genbank	57_37b	+1	reviewed	missense	c.393	p.R131S	1.000	HMMPfam_TGFb_propeptide	HMMPfam_TGFb_propeptide,superfamily_SSF57501,HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1	-	no_errors	
C11orf21	29125	genome.wustl.edu	37	11	2321978	2321978	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	2321978	2321978	C	G	SNP	C11orf21	NM_001142946	human	genbank	57_37b	-1	predicted	missense	c.127	p.D43H	0.002	NULL	NULL	-	no_errors	
C12orf64	283310	genome.wustl.edu	37	12	80730728	80730728	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	80730728	80730728	A	G	SNP	C12orf64	XM_002343203	human	genbank	57_37b	+1	model	missense	c.4495	p.K1499E	1.000	HMMSmart_SM00216,HMMPfam_VWD	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_AbfB domain (Pfam 05270),HMMSmart_SM00041	-	no_errors	
C1orf173	127254	genome.wustl.edu	37	1	75078444	75078444	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	75078444	75078444	G	A	SNP	C1orf173	NM_001002912	human	genbank	57_37b	-1	validated	silent	c.1050	p.L350	1.000	NULL	NULL	-	no_errors	
C20orf95	343578	genome.wustl.edu	37	20	37270404	37270404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	37270404	37270404	C	T	SNP	C20orf95	ENST00000373345	human	ensembl	57_37b	+1	known	missense	c.1156	p.H386Y	0.965	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors	
C6orf134	79969	genome.wustl.edu	37	6	30595007	30595007	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30595007	30595007	C	T	SNP	C6orf134	ENST00000330083	human	ensembl	57_37b	+1	known	silent	c.27	p.F9	0.001	NULL	HMMPfam_DUF738	-	no_errors	
C8orf48	157773	genome.wustl.edu	37	8	13425043	13425043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	13425043	13425043	G	A	SNP	C8orf48	NM_001007090	human	genbank	57_37b	+1	validated	missense	c.543	p.M181I	0.000	NULL	NULL	-	no_errors	
CCT6B	10693	genome.wustl.edu	37	17	33278998	33278998	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33278998	33278998	C	G	SNP	CCT6B	NM_006584	human	genbank	57_37b	-1	reviewed	missense	c.585	p.E195D	1.000	superfamily_GroEL equatorial domain-like,HMMPfam_Cpn60_TCP1,superfamily_GroEL-intermediate domain like	superfamily_GroEL equatorial domain-like,HMMPfam_Cpn60_TCP1,PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,superfamily_GroEL-intermediate domain like,superfamily_GroEL apical domain-like	-	no_errors	
CLDN24	0	genome.wustl.edu	37	4	184243151	184243151	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	184243151	184243151	C	G	SNP	CLDN24	XM_001714660	human	genbank	57_37b	-1	model	missense	c.429	p.K143N	0.186	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors	
COASY	80347	genome.wustl.edu	37	17	40715174	40715174	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40715174	40715174	C	T	SNP	COASY	ENST00000426807	human	ensembl	57_37b	+1	known	missense	c.463	p.P155S	0.998	NULL	NULL	-	no_errors	
COX5A	9377	genome.wustl.edu	37	15	75221511	75221511	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75221511	75221511	G	A	SNP	COX5A	NM_004255	human	genbank	57_37b	-1	reviewed	missense	c.163	p.R55C	1.000	HMMPfam_COX5A,superfamily_Cyt_c_ox5A	HMMPfam_COX5A,superfamily_Cyt_c_ox5A	-	no_errors	
DCST1	149095	genome.wustl.edu	37	1	155018634	155018634	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155018634	155018634	G	T	SNP	DCST1	NM_152494	human	genbank	57_37b	+1	validated	nonsense	c.1306	p.E436*	0.814	HMMPfam_DC_STAMP	HMMPfam_DC_STAMP	-	no_errors	
DIRAS3	9077	genome.wustl.edu	37	1	68512642	68512642	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	68512642	68512642	G	A	SNP	DIRAS3	NM_004675	human	genbank	57_37b	-1	reviewed	silent	c.339	p.V113	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMSmart_SM00174,HMMPfam_Ras	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMSmart_SM00174,HMMPfam_Ras	-	no_errors	
ENSG00000170089	0	genome.wustl.edu	37	5	177305674	177305674	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177305674	177305674	G	C	SNP	ENSG00000170089	ENST00000303154	human	ensembl	57_37b	+1	known	missense	c.451	p.D151H	0.998	superfamily_WD40_like,HMMSmart_WD40	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
ENSG00000197511	0	genome.wustl.edu	37	1	16862282	16862282	+	Missense_Mutation	SNP	G	A	A	rs11260784	byCluster;by2Hit2Allele;byHapMap	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16862282	16862282	G	A	SNP	ENSG00000197511	ENST00000357301	human	ensembl	57_37b	+1	known	missense	c.3	p.M1I	0.066	NULL	NULL	-		
ENSG00000241327	0	genome.wustl.edu	37	4	105895837	105895837	+	RNA	SNP	G	G	A	rs13147309	byCluster;byFrequency;by1000genomes	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	105895837	105895837	G	A	SNP	ENSG00000241327	ENST00000462647	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.145	-	-	-		
ENSG00000245179	0	genome.wustl.edu	37	11	64621788	64621788	+	RNA	SNP	T	T	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64621788	64621788	T	G	SNP	ENSG00000245179	ENST00000499123	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	
ENSG00000246055	0	genome.wustl.edu	37	14	105477507	105477507	+	RNA	SNP	G	G	A	rs7144401	byCluster;byFrequency;by1000genomes	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105477507	105477507	G	A	SNP	ENSG00000246055	ENST00000499439	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-		
ENSG00000247634	0	genome.wustl.edu	37	7	66415904	66415904	+	RNA	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	66415904	66415904	G	A	SNP	ENSG00000247634	ENST00000500273	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	
FAHD2A	51011	genome.wustl.edu	37	2	96076768	96076768	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	96076768	96076768	G	A	SNP	FAHD2A	NM_016044	human	genbank	57_37b	+1	validated	missense	c.679	p.V227I	0.829	superfamily_Fumarylacetoacetase_C-rel,HMMPfam_FAA_hydrolase	superfamily_Fumarylacetoacetase_C-rel,HMMPfam_FAA_hydrolase	-	no_errors	
FAM110B	90362	genome.wustl.edu	37	8	59059479	59059479	+	Silent	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	59059479	59059479	C	T	SNP	FAM110B	NM_147189	human	genbank	57_37b	+1	validated	silent	c.690	p.I230	0.507	NULL	NULL	-	no_errors	
FPGS	2356	genome.wustl.edu	37	9	130575737	130575737	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	130575737	130575737	C	T	SNP	FPGS	NM_004957	human	genbank	57_37b	+1	reviewed	missense	c.1618	p.P540S	0.000	NULL	superfamily_MurD-like peptide ligases catalytic domain,PatternScan_FOLYLPOLYGLU_SYNT_1,PatternScan_FOLYLPOLYGLU_SYNT_2,HMMPfam_Mur_ligase_C,superfamily_MurD-like peptide ligases peptide-binding domain	-	no_errors	
FRMPD1	22844	genome.wustl.edu	37	9	37731074	37731074	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	37731074	37731074	G	A	SNP	FRMPD1	NM_014907	human	genbank	57_37b	+1	validated	missense	c.832	p.V278M	0.990	HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	PatternScan_FERM_1,PatternScan_FERM_2,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	-	no_errors	
HGS	9146	genome.wustl.edu	37	17	79653400	79653400	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79653400	79653400	G	T	SNP	HGS	NM_004712	human	genbank	57_37b	+1	provisional	missense	c.181	p.A61S	1.000	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE,HMMPfam_UIM	-	no_errors	
HRNR	388697	genome.wustl.edu	37	1	152191302	152191303	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152191302	152191303	-	G	INS	HRNR	NM_001009931	human	genbank	57_37b	-1	validated	frame_shift_ins	c.2803_2802	p.K934fs	0.000:0.000	NULL	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_SVS_QK	-	no_errors	
HSPA4L	22824	genome.wustl.edu	37	4	128751921	128751921	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	128751921	128751921	G	A	SNP	HSPA4L	NM_014278	human	genbank	57_37b	+1	provisional	silent	c.2295	p.V765	1.000	superfamily_SSF100934	superfamily_SSF53067,HMMPfam_HSP70,PatternScan_HSP70_3,superfamily_SSF100920,superfamily_SSF100934	-	no_errors	
ITGAM	3684	genome.wustl.edu	37	16	31341486	31341486	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31341486	31341486	G	T	SNP	ITGAM	NM_000632	human	genbank	57_37b	+1	reviewed	splice_site	c.3060+1	e26+1	1.000	-	-	-	no_errors	
KCTD21	283219	genome.wustl.edu	37	11	77885216	77885216	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	77885216	77885216	C	T	SNP	KCTD21	NM_001029859	human	genbank	57_37b	-1	provisional	missense	c.385	p.E129K	0.983	NULL	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra	-	no_errors	
KNDC1	85442	genome.wustl.edu	37	10	135026343	135026343	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	135026343	135026343	G	A	SNP	KNDC1	NM_152643	human	genbank	57_37b	+1	validated	missense	c.4360	p.A1454T	0.134	superfamily_Ras GEF	HMMSmart_SM00750,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMSmart_SM00147,HMMPfam_RasGEF	-	no_errors	
KRT81	3887	genome.wustl.edu	37	12	52681912	52681912	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	52681912	52681912	C	G	SNP	KRT81	NM_002281	human	genbank	57_37b	-1	reviewed	silent	c.756	p.S252	0.490	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors	
LAYN	143903	genome.wustl.edu	37	11	111414717	111414717	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	111414717	111414717	G	A	SNP	LAYN	NM_178834	human	genbank	57_37b	+1	provisional	missense	c.155	p.R52Q	0.997	superfamily_C-type_lectin_fold,HMMSmart_CLECT,HMMPfam_Lectin_C	superfamily_C-type_lectin_fold,HMMSmart_CLECT,HMMPfam_Lectin_C	-	no_errors	
LHCGR	3973	genome.wustl.edu	37	2	48915909	48915909	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	48915909	48915909	A	T	SNP	LHCGR	NM_000233	human	genbank	57_37b	-1	reviewed	missense	c.1027	p.C343S	0.999	superfamily_Family A G protein-coupled receptor-like	superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
LOC653061	653061	genome.wustl.edu	37	15	23609313	23609314	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23609313	23609314	-	T	INS	LOC653061	XM_002343325	human	genbank	57_37b	+1	model	frame_shift_ins	c.1244_1245	p.G417fs	0.000:0.000	NULL	NULL	-	no_errors	
LOC653061	653061	genome.wustl.edu	37	15	23609317	23609319	+	In_Frame_Del	DEL	TGG	TGG	-	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	TGG	TGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23609317	23609319	TGG	-	DEL	LOC653061	XM_002343325	human	genbank	57_37b	+1	model	in_frame_del	c.1248_1250	p.G417in_frame_del	0.001:0.004:0.006	NULL	NULL	(deletion:cds_exon[23609261,23609344])	no_errors	
LTBP2	4053	genome.wustl.edu	37	14	74970002	74970002	+	Missense_Mutation	SNP	C	C	T	rs75200417	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74970002	74970002	C	T	SNP	LTBP2	NM_000428	human	genbank	57_37b	-1	reviewed	missense	c.4808	p.R1603H	0.001	superfamily_TB module/8-cys domain,HMMPfam_TB	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,HMMPfam_EGF,superfamily_Growth factor receptor domain	-		
MAP3K10	4294	genome.wustl.edu	37	19	40711935	40711935	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40711935	40711935	C	T	SNP	MAP3K10	NM_002446	human	genbank	57_37b	+1	reviewed	missense	c.1306	p.R436W	0.999	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MAZ	4150	genome.wustl.edu	37	16	29821526	29821526	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	29821526	29821526	C	T	SNP	MAZ	NM_002383	human	genbank	57_37b	+1	validated	nonsense	c.1408	p.Q470*	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
MBOAT7	79143	genome.wustl.edu	37	19	54691160	54691160	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54691160	54691160	G	A	SNP	MBOAT7	NM_024298	human	genbank	57_37b	-1	reviewed	silent	c.216	p.H72	0.994	NULL	HMMPfam_MBOAT	-	no_errors	
MCM6	4175	genome.wustl.edu	37	2	136602246	136602246	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	136602246	136602246	C	T	SNP	MCM6	NM_005915	human	genbank	57_37b	-1	reviewed	missense	c.2218	p.E740K	1.000	NULL	superfamily_Nucleic acid-binding proteins,HMMSmart_SM00350,HMMPfam_MCM,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_MCM_1	-	no_errors	
MRPS11	64963	genome.wustl.edu	37	15	89020219	89020219	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	89020219	89020219	G	A	SNP	MRPS11	NM_022839	human	genbank	57_37b	+1	reviewed	splice_site	c.412-1	e5-1	1.000	-	-	-	no_errors	
MYADML2	255275	genome.wustl.edu	37	17	79899495	79899495	+	Silent	SNP	G	G	A	rs4796854	byCluster;byFrequency;by2Hit2Allele	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79899495	79899495	G	A	SNP	MYADML2	NM_001145113	human	genbank	57_37b	-1	validated	silent	c.123	p.A41	0.979	HMMPfam_MARVEL	HMMPfam_MARVEL	-		
OR5I1	10798	genome.wustl.edu	37	11	55703121	55703121	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55703121	55703121	G	C	SNP	OR5I1	NM_006637	human	genbank	57_37b	-1	reviewed	missense	c.756	p.I252M	0.566	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OTOF	9381	genome.wustl.edu	37	2	26707384	26707384	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	26707384	26707384	G	A	SNP	OTOF	NM_194248	human	genbank	57_37b	-1	reviewed	missense	c.1163	p.T388M	0.997	HMMPfam_FerI	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2,HMMPfam_FerI,HMMPfam_FerB	-	no_errors	
P2RY4	5030	genome.wustl.edu	37	X	69479266	69479266	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69479266	69479266	G	A	SNP	P2RY4	NM_002565	human	genbank	57_37b	-1	reviewed	missense	c.209	p.T70M	0.732	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PAX5	5079	genome.wustl.edu	37	9	37020655	37020655	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	37020655	37020655	A	-	DEL	PAX5	NM_016734	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.190	p.C64fs	1.000	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like,PatternScan_PAIRED_1	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like,PatternScan_PAIRED_1	(deletion:cds_exon[37020633,37020798])	no_errors	
PCDHAC2	56134	genome.wustl.edu	37	5	140348769	140348769	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140348769	140348769	C	A	SNP	PCDHAC2	NM_018899	human	genbank	57_37b	+1	reviewed	missense	c.2418	p.F806L	1.000	NULL	HMMSmart_SM00112,superfamily_Cadherin-like,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PDGFRA	5156	genome.wustl.edu	37	4	55133783	55133783	+	Silent	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	55133783	55133783	C	G	SNP	PDGFRA	NM_006206	human	genbank	57_37b	+1	reviewed	silent	c.996	p.V332	0.146	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
QSER1	79832	genome.wustl.edu	37	11	32955061	32955061	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	32955061	32955061	G	T	SNP	QSER1	NM_001076786	human	genbank	57_37b	+1	provisional	missense	c.1870	p.V624F	0.917	NULL	NULL	-	no_errors	
SERPINA6	866	genome.wustl.edu	37	14	94770757	94770757	+	Nonstop_Mutation	SNP	A	A	C	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	94770757	94770757	A	C	SNP	SERPINA6	NM_001756	human	genbank	57_37b	-1	reviewed	nonstop	c.1216	p.*406E	0.000	NULL	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors	
SLC2A14	144195	genome.wustl.edu	37	12	7981305	7981305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	7981305	7981305	G	A	SNP	SLC2A14	NM_153449	human	genbank	57_37b	-1	provisional	missense	c.740	p.T247M	0.000	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2,PatternScan_SUGAR_TRANSPORT_1	-	no_errors	
SNX10	29887	genome.wustl.edu	37	7	26404752	26404752	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	26404752	26404752	G	A	SNP	SNX10	NM_013322	human	genbank	57_37b	+1	reviewed	missense	c.298	p.D100N	1.000	superfamily_PX,HMMPfam_PX,HMMSmart_PX	superfamily_PX,HMMPfam_PX,HMMSmart_PX	-	no_errors	
TROAP	10024	genome.wustl.edu	37	12	49724652	49724652	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49724652	49724652	C	G	SNP	TROAP	NM_005480	human	genbank	57_37b	+1	validated	missense	c.2024	p.S675C	0.994	NULL	NULL	-	no_errors	
TSPAN7	7102	genome.wustl.edu	37	X	38533518	38533518	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	38533518	38533518	C	A	SNP	TSPAN7	NM_004615	human	genbank	57_37b	+1	reviewed	missense	c.389	p.T130N	1.000	HMMPfam_Tetraspannin,superfamily_Tetraspanin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	-	no_errors	
TWISTNB	221830	genome.wustl.edu	37	7	19739894	19739894	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	19739894	19739894	T	A	SNP	TWISTNB	NM_001002926	human	genbank	57_37b	-1	validated	missense	c.406	p.N136Y	1.000	NULL	HMMPfam_RNA_pol_Rpb7_N	-	no_errors	
UQCRC2	7385	genome.wustl.edu	37	16	21994417	21994417	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	21994417	21994417	G	C	SNP	UQCRC2	NM_003366	human	genbank	57_37b	+1	validated	missense	c.1287	p.K429N	1.000	superfamily_LuxS/MPP-like metallohydrolase	superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16,PatternScan_INSULINASE,HMMPfam_Peptidase_M16_C	-	no_errors	
ZNF498	221785	genome.wustl.edu	37	7	99219167	99219167	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99219167	99219167	G	T	SNP	ZNF498	NM_145115	human	genbank	57_37b	+1	validated	nonsense	c.559	p.G187*	0.984	NULL	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZSCAN2	54993	genome.wustl.edu	37	15	85164365	85164365	+	Silent	SNP	G	G	A	novel	unknown	TCGA-C8-A137-01	TCGA-C8-A137-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	85164365	85164365	G	A	SNP	ZSCAN2	NM_181877	human	genbank	57_37b	+1	reviewed	silent	c.939	p.K313	0.877	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
