Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ARPC2	10109	genome.wustl.edu	37	2	219114602	219114602	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	219114602	219114602	G	A	SNP	ARPC2	NM_005731	human	genbank	57_37b	+1	reviewed	missense	c.836	p.R279H	1.000	HMMPfam_P34-Arc,superfamily_Arp2/3 complex subunits	superfamily_Arp2/3 complex subunits,HMMPfam_P34-Arc	-	no_errors	
ATP13A1	57130	genome.wustl.edu	37	19	19762519	19762519	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19762519	19762519	G	A	SNP	ATP13A1	NM_020410	human	genbank	57_37b	-1	validated	silent	c.2314	p.L772	1.000	superfamily_HAD-like	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors	
ATP13A5	344905	genome.wustl.edu	37	3	193039554	193039554	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	193039554	193039554	C	T	SNP	ATP13A5	NM_198505	human	genbank	57_37b	-1	provisional	missense	c.1831	p.A611T	0.019	superfamily_SSF81665,superfamily_SSF81660	superfamily_SSF81665,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,superfamily_SSF56784	-	no_errors	
ATP2B3	492	genome.wustl.edu	37	X	152822411	152822411	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	152822411	152822411	T	G	SNP	ATP2B3	NM_001001344	human	genbank	57_37b	+1	reviewed	missense	c.2363	p.V788G	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Hydrolase,superfamily_HAD-like	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,HMMPfam_Hydrolase,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors	
BCL2L1	598	genome.wustl.edu	37	20	30309575	30309575	+	Silent	SNP	T	T	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	30309575	30309575	T	A	SNP	BCL2L1	NM_138578	human	genbank	57_37b	-1	reviewed	silent	c.447	p.A149	0.937	superfamily_Bcl-2 inhibitors of programmed cell death,HMMPfam_Bcl-2,HMMSmart_SM00337	HMMPfam_BH4,HMMSmart_SM00265,superfamily_Bcl-2 inhibitors of programmed cell death,PatternScan_BH4_1,PatternScan_BH3,HMMPfam_Bcl-2,HMMSmart_SM00337,PatternScan_BH1,PatternScan_BH2	-	no_errors	
CCDC40	55036	genome.wustl.edu	37	17	78058778	78058778	+	Silent	SNP	C	C	T	rs72849355	byHapMap;by1000genomes	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78058778	78058778	C	T	SNP	CCDC40	NM_017950	human	genbank	57_37b	+1	validated	silent	c.2226	p.S742	0.000	NULL	HMMPfam_BRE1	-		
CCND3	896	genome.wustl.edu	37	6	41908208	41908208	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	41908208	41908208	A	T	SNP	CCND3	NM_001760	human	genbank	57_37b	-1	reviewed	missense	c.314	p.V105D	1.000	superfamily_Cyclin_like,HMMPfam_Cyclin_N,HMMSmart_CYCLIN	superfamily_Cyclin_like,HMMPfam_Cyclin_N,PatternScan_CYCLINS,HMMSmart_CYCLIN,HMMPfam_Cyclin_C	-	no_errors	
CECR2	27443	genome.wustl.edu	37	22	18022239	18022239	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	18022239	18022239	C	T	SNP	CECR2	ENST00000400573	human	ensembl	57_37b	+1	known	missense	c.2341	p.R781C	0.850	NULL	superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
CEP170	9859	genome.wustl.edu	37	1	243319545	243319545	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	243319545	243319545	C	-	DEL	CEP170	NM_014812	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.3889	p.A1297fs	1.000	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA	(deletion:cds_exon[243319523,243319757])	no_errors	
CHD9	80205	genome.wustl.edu	37	16	53243700	53243700	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	53243700	53243700	A	G	SNP	CHD9	NM_025134	human	genbank	57_37b	+1	validated	missense	c.1759	p.K587E	1.000	NULL	superfamily_Chromodomain-like,HMMSmart_CHROMO,HMMPfam_Chromo,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_BRK,HMMSmart_BRK	-	no_errors	
CX3CR1	1524	genome.wustl.edu	37	3	39307802	39307802	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	39307802	39307802	C	G	SNP	CX3CR1	NM_001337	human	genbank	57_37b	-1	reviewed	missense	c.199	p.D67H	0.998	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
DNAH1	25981	genome.wustl.edu	37	3	52420266	52420266	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52420266	52420266	G	A	SNP	DNAH1	NM_015512	human	genbank	57_37b	+1	validated	missense	c.8716	p.A2906T	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
ENSG00000200254	0	genome.wustl.edu	37	1	43034740	43034740	+	RNA	SNP	T	T	C	rs12031515	byCluster;by2Hit2Allele	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	43034740	43034740	T	C	SNP	ENSG00000200254	ENST00000363384	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.009	-	-	-		
ENSG00000245549	0	genome.wustl.edu	37	1	16950880	16950880	+	RNA	SNP	T	T	C	rs1629127	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16950880	16950880	T	C	SNP	ENSG00000245549	ENST00000501442	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.238	-	-	-		
FLJ35390	0	genome.wustl.edu	37	7	44080769	44080769	+	RNA	SNP	A	A	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44080769	44080769	A	C	SNP	FLJ35390	NR_024416	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.006	-	-	-	no_errors	
FMO2	2327	genome.wustl.edu	37	1	171154975	171154975	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	171154975	171154975	G	C	SNP	FMO2	NM_001460	human	genbank	57_37b	+1	reviewed	missense	c.123	p.W41C	1.000	superfamily_SSF51905,HMMPfam_FMO-like	superfamily_SSF51905,HMMPfam_FMO-like	-	no_errors	
GAS6	2621	genome.wustl.edu	37	13	114524944	114524944	+	Silent	SNP	A	A	G	rs7400002	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	114524944	114524944	A	G	SNP	GAS6	NM_000820	human	genbank	57_37b	-1	reviewed	silent	c.1869	p.A623	0.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	HMMSmart_GLA,superfamily_VitK_dep_GLA,HMMPfam_Gla,PatternScan_GLA_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF,HMMPfam_EGF_CA,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	-		
GDAP2	54834	genome.wustl.edu	37	1	118426246	118426246	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	118426246	118426246	G	C	SNP	GDAP2	NM_017686	human	genbank	57_37b	-1	validated	missense	c.1111	p.L371V	1.000	superfamily_CRAL/TRIO domain,HMMSmart_SM00516	superfamily_Macro domain-like,HMMSmart_SM00506,HMMPfam_Macro,superfamily_CRAL/TRIO domain,HMMSmart_SM00516	-	no_errors	
IFLTD1	160492	genome.wustl.edu	37	12	25671812	25671812	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	25671812	25671812	A	G	SNP	IFLTD1	NM_001145728	human	genbank	57_37b	-1	validated	missense	c.1106	p.I369T	0.000	NULL	superfamily_Lamin A/C globular tail domain,HMMPfam_IF_tail	-	no_errors	
KCNH3	23416	genome.wustl.edu	37	12	49933229	49933229	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49933229	49933229	G	T	SNP	KCNH3	NM_012284	human	genbank	57_37b	+1	validated	silent	c.30	p.P10	0.992	NULL	PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS,HMMSmart_PAC,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	-	no_errors	
KCNJ10	3766	genome.wustl.edu	37	1	160012273	160012273	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160012273	160012273	C	G	SNP	KCNJ10	NM_002241	human	genbank	57_37b	-1	reviewed	missense	c.50	p.S17T	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_IRK,superfamily_E set domains	-	no_errors	
LAMA3	3909	genome.wustl.edu	37	18	21485570	21485570	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	21485570	21485570	C	A	SNP	LAMA3	NM_198129	human	genbank	57_37b	+1	reviewed	missense	c.6700	p.Q2234K	0.511	NULL	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,HMMSmart_SM00281,HMMPfam_Laminin_B,PatternScan_EGF_2,HMMPfam_Laminin_I,HMMPfam_Laminin_II,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_CHAPERONINS_CPN60	-	no_errors	
LIMK1	3984	genome.wustl.edu	37	7	73535516	73535516	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	73535516	73535516	A	C	SNP	LIMK1	NM_002314	human	genbank	57_37b	+1	reviewed	missense	c.1829	p.H610P	1.000	superfamily_Protein kinase-like (PK-like)	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP	-	no_errors	
LOC139431	139431	genome.wustl.edu	37	X	34165401	34165401	+	Missense_Mutation	SNP	C	C	G	rs5928433	byCluster;by1000genomes	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	34165401	34165401	C	G	SNP	LOC139431	XM_002343801	human	genbank	57_37b	+1	model	missense	c.377	p.P126R	0.056	superfamily_Ferritin-like,HMMPfam_Ferritin	superfamily_Ferritin-like,HMMPfam_Ferritin,PatternScan_FERRITIN_2	-		
LOC645605	645605	genome.wustl.edu	37	20	58035676	58035676	+	Nonstop_Mutation	SNP	A	A	G	rs6026892	byCluster;byFrequency;by1000genomes	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	58035676	58035676	A	G	SNP	LOC645605	XM_001716708	human	genbank	57_37b	-1	model	nonstop	c.583	p.*195Q	0.994	NULL	NULL	-		
LRRC33	375387	genome.wustl.edu	37	3	196387275	196387275	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196387275	196387275	C	T	SNP	LRRC33	NM_198565	human	genbank	57_37b	+1	provisional	missense	c.761	p.T254M	0.074	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors	
MAPK13	5603	genome.wustl.edu	37	6	36098410	36098410	+	Silent	SNP	A	A	C	rs1059227	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	36098410	36098410	A	C	SNP	MAPK13	NM_002754	human	genbank	57_37b	+1	reviewed	silent	c.51	p.T17	0.852	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_MAPK	-		
MAPK4	5596	genome.wustl.edu	37	18	48256050	48256050	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	48256050	48256050	C	T	SNP	MAPK4	NM_002747	human	genbank	57_37b	+1	reviewed	silent	c.1590	p.D530	0.048	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MATN4	8785	genome.wustl.edu	37	20	43933163	43933163	+	Silent	SNP	T	T	C	rs2233094	byCluster;byFrequency;by1000genomes	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	43933163	43933163	T	C	SNP	MATN4	NM_003833	human	genbank	57_37b	-1	reviewed	silent	c.348	p.A116	0.474	superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_Matrilin_ccoil	-		
MCC	4163	genome.wustl.edu	37	5	112363013	112363013	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	112363013	112363013	C	T	SNP	MCC	NM_001085377	human	genbank	57_37b	-1	reviewed	missense	c.3046	p.E1016K	1.000	NULL	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_MCC-bdg_PDZ	-	no_errors	
NEB	4703	genome.wustl.edu	37	2	152425880	152425880	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	152425880	152425880	A	C	SNP	NEB	NM_004543	human	genbank	57_37b	-1	reviewed	missense	c.12334	p.Y4112D	1.000	HMMSmart_SM00227,HMMPfam_Nebulin	HMMSmart_SM00227,HMMPfam_Nebulin,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
NUP155	9631	genome.wustl.edu	37	5	37327737	37327737	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	37327737	37327737	A	T	SNP	NUP155	NM_153485	human	genbank	57_37b	-1	reviewed	missense	c.2018	p.I673N	1.000	HMMPfam_Nucleoporin	HMMPfam_Nucleoporin	-	no_errors	
OR8H1	219469	genome.wustl.edu	37	11	56058345	56058345	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	56058345	56058345	T	C	SNP	OR8H1	NM_001005199	human	genbank	57_37b	-1	provisional	missense	c.194	p.H65R	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PFAS	5198	genome.wustl.edu	37	17	8161431	8161431	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8161431	8161431	G	A	SNP	PFAS	NM_012393	human	genbank	57_37b	+1	reviewed	missense	c.1250	p.R417Q	1.000	superfamily_PurM N-terminal domain-like	superfamily_PurS-like,superfamily_FGAM synthase PurL linker domain,superfamily_PurM N-terminal domain-like,HMMPfam_AIRS,superfamily_PurM C-terminal domain-like,HMMPfam_AIRS_C,superfamily_Class I glutamine amidotransferase-like	-	no_errors	
PHF8	23133	genome.wustl.edu	37	X	54028588	54028588	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54028588	54028588	C	T	SNP	PHF8	NM_015107	human	genbank	57_37b	-1	validated	missense	c.1141	p.G381S	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_EGF_2,PatternScan_ZF_PHD_1,superfamily_Clavaminate synthase-like,HMMSmart_SM00558,HMMPfam_JmjC	-	no_errors	
RNF213	57674	genome.wustl.edu	37	17	78264525	78264525	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78264525	78264525	C	T	SNP	RNF213	NM_020954	human	genbank	57_37b	+1	validated	silent	c.1269	p.T423	0.161	NULL	NULL	-	no_errors	
SATL1	340562	genome.wustl.edu	37	X	84348197	84348197	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	84348197	84348197	T	C	SNP	SATL1	ENST00000395409	human	ensembl	57_37b	-1	known	silent	c.1350	p.L450	0.974	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_Acetyltransf_1	superfamily_Acyl-CoA N-acyltransferases (Nat),HMMPfam_Acetyltransf_1	-	no_errors	
SEC24B	10427	genome.wustl.edu	37	4	110454805	110454805	+	Silent	SNP	T	T	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	110454805	110454805	T	G	SNP	SEC24B	NM_006323	human	genbank	57_37b	+1	reviewed	silent	c.3552	p.L1184	0.788	superfamily_C-terminal gelsolin-like domain of Sec23/24,HMMPfam_Gelsolin	PatternScan_MIP,superfamily_beta-sandwich domain of Sec23/24,superfamily_Zn-finger domain of Sec23/24,HMMPfam_zf-Sec23_Sec24,HMMPfam_Sec23_trunk,superfamily_vWA-like,HMMPfam_Sec23_BS,superfamily_Helical domain of Sec23/24,HMMPfam_Sec23_helical,superfamily_C-terminal gelsolin-like domain of Sec23/24,HMMPfam_Gelsolin	-	no_errors	
TSHZ2	128553	genome.wustl.edu	37	20	51870353	51870353	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	51870353	51870353	A	G	SNP	TSHZ2	NM_173485	human	genbank	57_37b	+1	validated	missense	c.356	p.H119R	0.998	NULL	PatternScan_HOMEOBOX_1,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_HOX,HMMPfam_Homeobox,HMMPfam_zf-C2H2	-	no_errors	
UNC45A	55898	genome.wustl.edu	37	15	91496469	91496469	+	Missense_Mutation	SNP	C	C	T	rs8041417	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	91496469	91496469	C	T	SNP	UNC45A	NM_018671	human	genbank	57_37b	+1	validated	missense	c.2506	p.R836W	0.913	superfamily_ARM repeat	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_2,superfamily_ARM repeat	-		
WWC3	55841	genome.wustl.edu	37	X	10035453	10035453	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	10035453	10035453	A	-	DEL	WWC3	NM_015691	human	genbank	57_37b	+1	validated	frame_shift_del	c.143	p.Q48fs	1.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	(deletion:cds_exon[10035327,10035530])	no_errors	
XKR5	389610	genome.wustl.edu	37	8	6668927	6668927	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D8-A145-01	TCGA-D8-A145-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	6668927	6668927	C	A	SNP	XKR5	ENST00000409172	human	ensembl	57_37b	-1	known	missense	c.1850	p.G617V	0.000	NULL	HMMPfam_XK-related	-	no_errors	
