Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
inFile	TCGA-BC-4072.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-4073.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10Q.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10R.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10S.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10T.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10U.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10W.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10X.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10Y.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A10Z.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A110.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A112.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A216.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-BC-A217.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-5258.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-5260.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-5261.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-5262.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-5263.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-5264.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-A123.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-CC-A1HT.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A113.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A114.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A115.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A116.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A118.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A119.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A11A.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A11B.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A11C.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A11D.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A1E9.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A1EC.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-DD-A1EL.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-EP-A12J.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-EP-A26S.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-EP-A2KA.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-EP-A2KB.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-EP-A2KC.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-ES-A2HS.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-ES-A2HT.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25S.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25T.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25U.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25V.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25W.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25X.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25Y.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A25Z.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A3CG.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A3CI.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A3CJ.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
inFile	TCGA-G3-A3CK.clin.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00307:18	Merge_Clinical_2012051500	LIHC.clin.merged.txt	Clinical	Level_4	text	gdac.broadinstitute.org_LIHC.Merge_Clinical.Level_4.2012051500.0.0	yes
