Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
SERPINF1	5176	genome.wustl.edu	36	17	1621076	1621076	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1621076	1621076	SERPINF1	17	C	C	T	27
RANBP6	26953	genome.wustl.edu	36	9	6004609	6004609	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	6004609	6004609	RANBP6	9	A	A	G	8
TP53	7157	genome.wustl.edu	36	17	7519113	7519113	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7519113	7519113	TP53	17	C	C	G	27
DNAH11	8701	genome.wustl.edu	36	7	21814035	21814035	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21814035	21814035	DNAH11	7	G	G	A	38
EPHB2	2048	genome.wustl.edu	36	1	23064266	23064266	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	23064266	23064266	EPHB2	1	C	C	G	32
FRY	10129	genome.wustl.edu	36	13	31733643	31733643	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	31733643	31733643	FRY	13	A	A	G	13
PSTPIP2	9050	genome.wustl.edu	36	18	41832788	41832788	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	41832788	41832788	PSTPIP2	18	C	C	T	26
WDR87	83889	genome.wustl.edu	36	19	43075607	43075607	+	Missense_Mutation	SNP	T	G	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	T	T	G	G	G	G	Unknown	Valid	Germline	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	43075607	43075607	WDR87	19	T	G	G	63
PORCN	64840	genome.wustl.edu	36	X	48254630	48254630	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	48254630	48254630	PORCN	23	T	T	G	63
RELB	5971	genome.wustl.edu	36	19	50229366	50229366	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	50229366	50229366	RELB	19	G	G	A	39
ERCC6	2074	genome.wustl.edu	36	10	50378606	50378606	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	50378606	50378606	ERCC6	10	G	G	C	37
RSPH6A	81492	genome.wustl.edu	36	19	50995594	50995594	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	50995594	50995594	RSPH6A	19	G	G	C	39
B3GNT2	10678	genome.wustl.edu	36	2	62303370	62303370	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	62303370	62303370	B3GNT2	2	G	G	A	38
ADAMTS14	140766	genome.wustl.edu	36	10	72190237	72190237	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	72190237	72190237	ADAMTS14	10	G	G	C	39
PAPLN	89932	genome.wustl.edu	36	14	72787459	72787459	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	72787459	72787459	PAPLN	14	C	C	A	25
TTC18	118491	genome.wustl.edu	36	10	74783467	74783467	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	74783467	74783467	TTC18	10	C	C	A	28
AP3B2	8120	genome.wustl.edu	36	15	81128641	81128641	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	81128641	81128641	AP3B2	15	C	C	T	27
PMPCB	9512	genome.wustl.edu	36	7	102735326	102735326	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	102735326	102735326	PMPCB	7	G	G	C	45
CENPE	1062	genome.wustl.edu	36	4	104274451	104274451	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	104274451	104274451	CENPE	4	G	G	A	47
AP4B1	10717	genome.wustl.edu	36	1	114244294	114244294	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	114244294	114244294	AP4B1	1	C	C	T	19
GPRC6A	222545	genome.wustl.edu	36	6	117220057	117220057	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	117220057	117220057	GPRC6A	6	T	T	G	55
LOC442434	442434	genome.wustl.edu	36	9	120566038	120566038	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	120566038	120566038	LOC442434	9	G	G	C	42
OR10G7	390265	genome.wustl.edu	36	11	123414444	123414444	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	123414444	123414444	OR10G7	11	T	T	C	58
TPK1	27010	genome.wustl.edu	36	7	143919487	143919487	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	143919487	143919487	TPK1	7	T	T	C	52
HPS3	84343	genome.wustl.edu	36	3	150360541	150360541	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	150360541	150360541	HPS3	3	G	G	T	44
LELP1	149018	genome.wustl.edu	36	1	151444086	151444086	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	151444086	151444086	LELP1	1	C	C	T	24
IL6R	3570	genome.wustl.edu	36	1	152673740	152673740	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152673740	152673740	IL6R	1	G	G	A	40
TTN	7273	genome.wustl.edu	36	2	179145912	179145912	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	179145912	179145912	TTN	2	C	C	T	27
TTN	7273	genome.wustl.edu	36	2	179185371	179185371	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	179185371	179185371	TTN	2	T	T	C	56
MAP3K13	9175	genome.wustl.edu	36	3	186667364	186667364	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	186667364	186667364	MAP3K13	3	G	G	A	40
NCL	4691	genome.wustl.edu	36	2	232028561	232028561	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	232028561	232028561	NCL	2	G	G	A	45
UGT1A9	54600	genome.wustl.edu	36	2	234246084	234246084	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	234246084	234246084	UGT1A9	2	G	G	A	39
TCHH	7062	genome.wustl.edu	36	1	150348232	150348232	+	Missense_Mutation	SNP	A	A	T		Unknown	TCGA-04-1332-01	TCGA-04-1332-01	A	A	A	T	A	A	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	150348232	150348232	TCHH	1	A	A	T	9
KCNT1	57582	genome.wustl.edu	36	9	137782674	137782674	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-04-1332-01	TCGA-04-1332-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	137782674	137782674	KCNT1	9	G	G	A	40
