Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
KRTAP5-3	387266	genome.wustl.edu	36	11	1585657	1585657	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1585657	1585657	KRTAP5-3	11	C	C	A	24
CSMD1	64478	genome.wustl.edu	36	8	2951467	2951467	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	2951467	2951467	CSMD1	8	T	T	A	63
GPR78	27201	genome.wustl.edu	36	4	8633792	8633792	+	Silent	SNP	C	T	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	8633792	8633792	GPR78	4	C	T	T	24
TAS2R50	259296	genome.wustl.edu	36	12	11030719	11030719	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	11030719	11030719	TAS2R50	12	G	G	C	36
SGCZ	137868	genome.wustl.edu	36	8	13992458	13992458	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	13992458	13992458	SGCZ	8	A	A	T	3
SLCO1A2	6579	genome.wustl.edu	36	12	21363579	21363579	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	21363579	21363579	SLCO1A2	12	C	C	T	23
GPLD1	2822	genome.wustl.edu	36	6	24570970	24570970	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	24570970	24570970	GPLD1	6	A	A	G	4
SVIL	6840	genome.wustl.edu	36	10	29813712	29813712	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	29813712	29813712	SVIL	10	T	T	A	59
C5orf22	55322	genome.wustl.edu	36	5	31574387	31574387	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	31574387	31574387	C5orf22	5	C	C	G	20
DCLK1	9201	genome.wustl.edu	36	13	35322904	35322904	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	35322904	35322904	DCLK1	13	G	G	A	39
KIAA1755	85449	genome.wustl.edu	36	20	36288975	36288975	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	36288975	36288975	KIAA1755	20	C	C	T	19
PIK3C3	5289	genome.wustl.edu	36	18	37854608	37854608	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	37854608	37854608	PIK3C3	18	C	C	A	32
ZBTB32	27033	genome.wustl.edu	36	19	40899342	40899342	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	40899342	40899342	ZBTB32	19	C	C	A	30
LAMB2	3913	genome.wustl.edu	36	3	49134427	49134427	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	49134427	49134427	LAMB2	3	C	C	G	23
SMC1A	8243	genome.wustl.edu	36	X	53440132	53440132	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53440132	53440132	SMC1A	23	A	A	C	11
OS9	10956	genome.wustl.edu	36	12	56400183	56400183	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	56400183	56400183	OS9	12	C	C	A	29
SIGLEC12	89858	genome.wustl.edu	36	19	56693200	56693200	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	56693200	56693200	SIGLEC12	19	A	A	G	6
ZNF615	284370	genome.wustl.edu	36	19	57189366	57189366	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	57189366	57189366	ZNF615	19	G	G	A	48
LILRB4	11006	genome.wustl.edu	36	19	59871015	59871015	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	59871015	59871015	LILRB4	19	A	A	T	1
TRIM23	373	genome.wustl.edu	36	5	64945746	64945746	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	64945746	64945746	TRIM23	5	G	G	A	40
MIER1	57708	genome.wustl.edu	36	1	67184458	67184458	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67184458	67184458	MIER1	1	A	A	G	8
GLCE	26035	genome.wustl.edu	36	15	67347845	67347845	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	67347845	67347845	GLCE	15	G	G	T	47
CPA6	57094	genome.wustl.edu	36	8	68502840	68502840	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	68502840	68502840	CPA6	8	C	C	T	19
THSD4	79875	genome.wustl.edu	36	15	69837379	69837379	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	69837379	69837379	THSD4	15	T	T	G	55
DUPD1	338599	genome.wustl.edu	36	10	76488091	76488091	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	76488091	76488091	DUPD1	10	T	T	C	57
SPRY2	10253	genome.wustl.edu	36	13	79809658	79809658	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	79809658	79809658	SPRY2	13	C	C	T	19
ABCB4	5244	genome.wustl.edu	36	7	86873648	86873648	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	86873648	86873648	ABCB4	7	A	A	C	5
PRDM7	11105	genome.wustl.edu	36	16	88655965	88655965	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	88655965	88655965	PRDM7	16	C	C	T	26
RAGE	5891	genome.wustl.edu	36	14	101768721	101768721	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	101768721	101768721	RAGE	14	T	T	G	63
BAG5	9529	genome.wustl.edu	36	14	103096679	103096679	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	103096679	103096679	BAG5	14	C	C	A	24
OR13D1	286365	genome.wustl.edu	36	9	106497444	106497444	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	106497444	106497444	OR13D1	9	G	G	A	42
FAM40A	85369	genome.wustl.edu	36	1	110389166	110389166	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	110389166	110389166	FAM40A	1	G	G	A	37
MLXIP	22877	genome.wustl.edu	36	12	121180101	121180101	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	121180101	121180101	MLXIP	12	A	A	G	5
ASAM	79827	genome.wustl.edu	36	11	122459124	122459124	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	122459124	122459124	ASAM	11	G	G	A	36
ASAP1	50807	genome.wustl.edu	36	8	131193526	131193526	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	131193526	131193526	ASAP1	8	C	C	G	30
ZNF185	7739	genome.wustl.edu	36	X	151889641	151889641	+	Splice_Site_SNP	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Splice_Site_SNP	SNP	151889641	151889641	ZNF185	23	A	A	G	7
NUP210L	91181	genome.wustl.edu	36	1	152285218	152285218	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	152285218	152285218	NUP210L	1	C	C	A	21
UAP1	6675	genome.wustl.edu	36	1	160835707	160835707	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	160835707	160835707	UAP1	1	A	A	G	12
SERPINC1	462	genome.wustl.edu	36	1	172139768	172139768	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	172139768	172139768	SERPINC1	1	G	G	A	37
PLD1	5337	genome.wustl.edu	36	3	172820934	172820934	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	172820934	172820934	PLD1	3	T	T	C	53
PAPPA2	60676	genome.wustl.edu	36	1	174935189	174935189	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	174935189	174935189	PAPPA2	1	A	A	G	12
NLRP3	114548	genome.wustl.edu	36	1	245673982	245673982	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	245673982	245673982	NLRP3	1	C	C	G	24
ABCB11	8647	genome.wustl.edu	36	2	169509662	169509662	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	169509662	169509662	ABCB11	2	A	A	G	15
SLIT2	9353	genome.wustl.edu	36	4	20228322	20228322	+	Silent	SNP	G	A	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	A	G	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	WashU	Silent	SNP	20228322	20228322	SLIT2	4	G	A	G	34
TP53	7157	genome.wustl.edu	36	17	7517577	7517577	+	Splice_Site_SNP	SNP	C	C	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C					Verified	Unknown	Somatic	Phase_III	PCR	Unknown		dbGAP	Sanger_PCR_WGA	WashU	Splice_Site_SNP	SNP	7517577	7517577	TP53	17	C	C	G	18
SPRYD5	84767	genome.wustl.edu	36	11	55409881	55409881	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	55409881	55409881	SPRYD5	11	A	A	T	11
ANO8	57719	genome.wustl.edu	36	19	17296902	17296902	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	17296902	17296902	ANO8	19	C	C	G	24
PATZ1	23598	genome.wustl.edu	36	22	30061753	30061753	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1436-01	TCGA-24-1436-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	30061753	30061753	PATZ1	22	G	G	A	38
CDC5L	988	genome.wustl.edu	36	6	44502419	44502419	+	Frame_Shift_Del	DEL	T	T	-		Unknown	TCGA-24-1436-01	TCGA-24-1436-01	T	T	T	-	T	T	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	44502419	44502419	CDC5L	6	T	T	-	54
