Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
IL32	9235	genome.wustl.edu	36	16	3059304	3059304	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	3059304	3059304	IL32	16	G	G	C	41
ENSG00000180913		genome.wustl.edu	36	11	6106850	6106850	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	6106850	6106850	ENSG00000180913	11	A	A	T	6
KIAA0232	9778	genome.wustl.edu	36	4	6913767	6913767	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6913767	6913767	KIAA0232	4	A	A	T	1
PTPRM	5797	genome.wustl.edu	36	18	7939198	7939198	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	7939198	7939198	PTPRM	18	C	C	T	28
FAM134B	54463	genome.wustl.edu	36	5	16531974	16531974	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	16531974	16531974	FAM134B	5	T	T	C	62
C20orf26	26074	genome.wustl.edu	36	20	20217566	20217566	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	20217566	20217566	C20orf26	20	G	G	A	41
ZNF208	7757	genome.wustl.edu	36	19	21946919	21946919	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	21946919	21946919	ZNF208	19	A	A	G	6
SPATA6	54558	genome.wustl.edu	36	1	48593979	48593979	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	48593979	48593979	SPATA6	1	G	G	A	39
KDM5C	8242	genome.wustl.edu	36	X	53247590	53247590	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	53247590	53247590	KDM5C	23	G	G	A	41
DST	667	genome.wustl.edu	36	6	56437496	56437496	+	Nonsense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	56437496	56437496	DST	6	T	T	A	61
CDH26	60437	genome.wustl.edu	36	20	58002852	58002852	+	Missense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	58002852	58002852	CDH26	20	C	G	G	24
PCDH20	64881	genome.wustl.edu	36	13	60884812	60884812	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	60884812	60884812	PCDH20	13	G	A	A	39
OPHN1	4983	genome.wustl.edu	36	X	67200534	67200534	+	Missense_Mutation	SNP	G	T	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	67200534	67200534	OPHN1	23	G	T	T	44
PRDM14	63978	genome.wustl.edu	36	8	71141073	71141073	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	71141073	71141073	PRDM14	8	C	C	A	29
LOC100132353		genome.wustl.edu	36	1	72513279	72513279	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Nonsense_Mutation	SNP	72513279	72513279	LOC100132353	1	G	G	T	41
PRKRIR	5612	genome.wustl.edu	36	11	75740173	75740173	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	75740173	75740173	PRKRIR	11	G	G	A	39
LRRC50	123872	genome.wustl.edu	36	16	82745706	82745706	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	82745706	82745706	LRRC50	16	G	G	C	41
LOC100130211		genome.wustl.edu	36	X	85302150	85302150	+	Missense_Mutation	SNP	T	G	G	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	T	T	G	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	85302150	85302150	LOC100130211	23	T	G	G	62
GRID1	2894	genome.wustl.edu	36	10	87479305	87479305	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	87479305	87479305	GRID1	10	T	T	A	54
GAL3ST4	79690	genome.wustl.edu	36	7	99595895	99595895	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	99595895	99595895	GAL3ST4	7	C	C	A	24
GRIN3A	116443	genome.wustl.edu	36	9	103472539	103472539	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	103472539	103472539	GRIN3A	9	G	G	T	44
RIMS2	9699	genome.wustl.edu	36	8	104778634	104778634	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	104778634	104778634	RIMS2	8	C	C	T	20
SNX19	399979	genome.wustl.edu	36	11	130290809	130290809	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	130290809	130290809	SNX19	11	A	A	G	7
NTM	50863	genome.wustl.edu	36	11	131521404	131521404	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	131521404	131521404	NTM	11	G	G	A	43
YSK4	80122	genome.wustl.edu	36	2	135472902	135472902	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	135472902	135472902	YSK4	2	C	C	G	22
SLITRK2	84631	genome.wustl.edu	36	X	144712869	144712869	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	144712869	144712869	SLITRK2	23	G	G	A	46
DRD5P2		genome.wustl.edu	36	1	147170059	147170059	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	147170059	147170059	DRD5P2	1	G	G	A	38
POGZ	23126	genome.wustl.edu	36	1	149644636	149644636	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	149644636	149644636	POGZ	1	C	C	A	21
YEATS2	55689	genome.wustl.edu	36	3	184976435	184976435	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	184976435	184976435	YEATS2	3	G	G	A	46
FAT1	2195	genome.wustl.edu	36	4	187865550	187865550	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	187865550	187865550	FAT1	4	T	T	C	51
MASP1	5648	genome.wustl.edu	36	3	188436440	188436440	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	188436440	188436440	MASP1	3	G	G	A	37
FMOD	2331	genome.wustl.edu	36	1	201583696	201583696	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	201583696	201583696	FMOD	1	T	T	C	49
GNPAT	8443	genome.wustl.edu	36	1	229465158	229465159	+	Frame_Shift_Del	DEL	CT	CT	-	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	CT	CT	CT	-	CT	CT	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Frame_Shift_Del	DEL	229465158	229465159	GNPAT	1	CT	CT	-	24
VAX1	11023	genome.wustl.edu	36	10	118885982	118885982	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	118885982	118885982	VAX1	10	G	G	A	39
MUC5B	727897	genome.wustl.edu	36	11	1223834	1223834	+	Missense_Mutation	SNP	A	A	G		Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	G	A	A	Unknown	Valid	Somatic	PhaseIII	Capture		1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	1223834	1223834	MUC5B	11	A	A	G	6
MYOD1	4654	genome.wustl.edu	36	11	17698019	17698019	+	Silent	SNP	G	T	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	T	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Silent	SNP	17698019	17698019	MYOD1	11	G	T	T	39
OR51A7	119687	genome.wustl.edu	36	11	4885418	4885418	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	4885418	4885418	OR51A7	11	G	G	A	48
IGHE		genome.wustl.edu	36	14	105138472	105138472	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	105138472	105138472	IGHE	14	A	A	T	15
TBX6	6911	genome.wustl.edu	36	16	30005602	30005602	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	30005602	30005602	TBX6	16	C	C	A	30
EMR4P	326342	genome.wustl.edu	36	19	6941796	6941796	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	6941796	6941796	EMR4P	19	A	A	G	9
ZAN	7455	genome.wustl.edu	36	7	100204256	100204256	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1549-01	TCGA-24-1549-01	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	WashU	Missense_Mutation	SNP	100204256	100204256	ZAN	7	A	A	T	3
