Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCA4	24	genome.wustl.edu	37	1	94510272	94510272	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	94510272	94510272	T	A	SNP	ABCA4	NM_000350	human	genbank	57_37b	-1	reviewed	missense	c.2947	p.T983S	0.998	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACCSL	0	genome.wustl.edu	37	11	44069730	44069730	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	44069730	44069730	G	A	SNP	ACCSL	NM_001031854	human	genbank	57_37b	+1	validated	silent	c.144	p.T48	0.000	NULL	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_1_2	-	no_errors	
ACTN2	88	genome.wustl.edu	37	1	236924389	236924389	+	Silent	SNP	C	C	T	rs1803031	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236924389	236924389	C	T	SNP	ACTN2	NM_001103	human	genbank	57_37b	+1	reviewed	silent	c.2442	p.F814	1.000	superfamily_EF-hand,HMMSmart_SM00054	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,HMMPfam_efhand_Ca_insen	-		
ADAMTS2	9509	genome.wustl.edu	37	5	178552015	178552015	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	178552015	178552015	C	T	SNP	ADAMTS2	NM_014244	human	genbank	57_37b	-1	reviewed	missense	c.2917	p.E973K	0.294	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors	
ADD1	118	genome.wustl.edu	37	4	2906605	2906605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	2906605	2906605	G	A	SNP	ADD1	NM_014189	human	genbank	57_37b	+1	reviewed	missense	c.1276	p.D426N	1.000	NULL	superfamily_Aldolase_II_N,HMMPfam_Aldolase_II	-	no_errors	
AFF4	27125	genome.wustl.edu	37	5	132270412	132270412	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	132270412	132270412	G	A	SNP	AFF4	NM_014423	human	genbank	57_37b	-1	validated	silent	c.345	p.P115	0.792	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors	
AGPAT6	137964	genome.wustl.edu	37	8	41471927	41471927	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	41471927	41471927	A	G	SNP	AGPAT6	NM_178819	human	genbank	57_37b	+1	validated	missense	c.934	p.K312E	1.000	HMMPfam_Acyltransferase,HMMSmart_SM00563	HMMPfam_Acyltransferase,HMMSmart_SM00563	-	no_errors	
APOB	338	genome.wustl.edu	37	2	21247970	21247970	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	21247970	21247970	A	G	SNP	APOB	NM_000384	human	genbank	57_37b	-1	reviewed	silent	c.2271	p.S757	0.000	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_DUF1943	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain,HMMPfam_DUF1943,HMMPfam_DUF1081	-	no_errors	
ARG1	383	genome.wustl.edu	37	6	131903781	131903781	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	131903781	131903781	C	G	SNP	ARG1	NM_000045	human	genbank	57_37b	+1	reviewed	missense	c.486	p.F162L	1.000	HMMPfam_Arginase,superfamily_Arginase/deacetylase	HMMPfam_Arginase,superfamily_Arginase/deacetylase,PatternScan_ARGINASE_1,PatternScan_ARGINASE_2,PatternScan_ARGINASE_3	-	no_errors	
ARHGAP24	83478	genome.wustl.edu	37	4	86916664	86916664	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	86916664	86916664	A	T	SNP	ARHGAP24	NM_001025616	human	genbank	57_37b	+1	validated	silent	c.1857	p.R619	0.785	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARHGEF10	9639	genome.wustl.edu	37	8	1844604	1844604	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	1844604	1844604	G	C	SNP	ARHGEF10	NM_014629	human	genbank	57_37b	+1	reviewed	missense	c.1546	p.E516Q	0.989	superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF	superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_SSF50729,superfamily_WD40_like,PatternScan_THIOL_PROTEASE_HIS	-	no_errors	
ASPM	259266	genome.wustl.edu	37	1	197071830	197071830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197071830	197071830	C	T	SNP	ASPM	NM_018136	human	genbank	57_37b	-1	reviewed	missense	c.6551	p.R2184Q	0.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00015,HMMPfam_IQ	superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,HMMPfam_CH,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
ATG5	9474	genome.wustl.edu	37	6	106740932	106740932	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	106740932	106740932	G	C	SNP	ATG5	NM_004849	human	genbank	57_37b	-1	validated	missense	c.286	p.L96V	1.000	HMMPfam_APG5	HMMPfam_APG5	-	no_errors	
ATP2B1	490	genome.wustl.edu	37	12	90028579	90028579	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	90028579	90028579	C	T	SNP	ATP2B1	NM_001682	human	genbank	57_37b	-1	reviewed	missense	c.763	p.D255N	1.000	superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653	HMMPfam_Cation_ATPase_N,superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Cation_ATPase_C	-	no_errors	
ATP6V0A2	23545	genome.wustl.edu	37	12	124218479	124218479	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124218479	124218479	G	C	SNP	ATP6V0A2	NM_012463	human	genbank	57_37b	+1	reviewed	missense	c.655	p.V219L	1.000	HMMPfam_V_ATPase_I	HMMPfam_V_ATPase_I	-	no_errors	
BAT2L2	0	genome.wustl.edu	37	1	171535915	171535915	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	171535915	171535915	C	G	SNP	BAT2L2	NM_015172	human	genbank	57_37b	+1	validated	nonsense	c.6485	p.S2162*	0.600	NULL	HMMPfam_BAT2_N	-	no_errors	
C10orf12	26148	genome.wustl.edu	37	10	98742128	98742128	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	98742128	98742128	A	C	SNP	C10orf12	NM_015652	human	genbank	57_37b	+1	predicted	silent	c.981	p.S327	0.000	NULL	NULL	-	no_errors	
C17orf95	124512	genome.wustl.edu	37	17	74729730	74729730	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74729730	74729730	G	C	SNP	C17orf95	NM_001080510	human	genbank	57_37b	+1	predicted	missense	c.535	p.E179Q	1.000	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_16	-	no_errors	
C1orf58	148362	genome.wustl.edu	37	1	222892339	222892339	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	222892339	222892339	G	A	SNP	C1orf58	NM_144695	human	genbank	57_37b	+1	validated	silent	c.174	p.K58	1.000	HMMPfam_BRO1	HMMPfam_BRO1	-	no_errors	
C3	718	genome.wustl.edu	37	19	6712586	6712586	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6712586	6712586	G	A	SNP	C3	NM_000064	human	genbank	57_37b	-1	reviewed	missense	c.1052	p.S351F	1.000	NULL	HMMPfam_A2M_N,HMMPfam_A2M_N_2,superfamily_Anaphylotoxins (complement system),HMMPfam_ANATO,HMMSmart_SM00104,PatternScan_ANAPHYLATOXIN_1,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep,superfamily_TIMP-like,HMMSmart_SM00643,HMMPfam_NTR	-	no_errors	
C5orf36	285600	genome.wustl.edu	37	5	93732078	93732078	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	93732078	93732078	C	T	SNP	C5orf36	NM_001145678	human	genbank	57_37b	-1	validated	silent	c.3024	p.L1008	1.000	NULL	NULL	-	no_errors	
CACNA1C	775	genome.wustl.edu	37	12	2622018	2622018	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	2622018	2622018	G	C	SNP	CACNA1C	NM_199460	human	genbank	57_37b	+1	reviewed	missense	c.1258	p.D420H	1.000	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CACNA1D	776	genome.wustl.edu	37	3	53757826	53757826	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	53757826	53757826	A	G	SNP	CACNA1D	NM_000720	human	genbank	57_37b	+1	validated	missense	c.1960	p.T654A	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CACNG4	27092	genome.wustl.edu	37	17	65026894	65026894	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	65026894	65026894	C	T	SNP	CACNG4	NM_014405	human	genbank	57_37b	+1	reviewed	missense	c.758	p.S253L	1.000	NULL	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors	
CCDC52	152185	genome.wustl.edu	37	3	113172603	113172603	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	113172603	113172603	G	C	SNP	CCDC52	NM_144718	human	genbank	57_37b	-1	validated	missense	c.1852	p.Q618E	0.053	NULL	NULL	-	no_errors	
CDH1	999	genome.wustl.edu	37	16	68772203	68772204	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	68772203	68772204	-	CA	INS	CDH1	NM_004360	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.52_53	p.S19fs	0.327:0.321	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CDHR5	0	genome.wustl.edu	37	11	617420	617420	+	Silent	SNP	A	A	G	rs61877857	byCluster;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	617420	617420	A	G	SNP	CDHR5	NM_021924	human	genbank	57_37b	-1	reviewed	silent	c.2469	p.D823	0.001	NULL	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	-		
CHST2	9435	genome.wustl.edu	37	3	142840752	142840752	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	142840752	142840752	G	A	SNP	CHST2	NM_004267	human	genbank	57_37b	+1	validated	missense	c.1094	p.R365H	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	-	no_errors	
CMYA5	202333	genome.wustl.edu	37	5	79095305	79095305	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	79095305	79095305	G	C	SNP	CMYA5	NM_153610	human	genbank	57_37b	+1	validated	missense	c.12076	p.E4026Q	0.005	HMMPfam_SPRY	superfamily_FN_III-like,HMMPfam_fn3,HMMSmart_FN3,HMMPfam_SPRY	-	no_errors	
CTCFL	140690	genome.wustl.edu	37	20	56094287	56094287	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	56094287	56094287	G	A	SNP	CTCFL	NM_080618	human	genbank	57_37b	-1	reviewed	missense	c.901	p.R301W	0.969	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
CWH43	80157	genome.wustl.edu	37	4	49030703	49030703	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	49030703	49030703	G	A	SNP	CWH43	NM_025087	human	genbank	57_37b	+1	validated	missense	c.1324	p.E442K	1.000	NULL	NULL	-	no_errors	
DDX3X	1654	genome.wustl.edu	37	X	41202029	41202029	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	41202029	41202029	G	A	SNP	DDX3X	NM_001356	human	genbank	57_37b	+1	reviewed	silent	c.483	p.E161	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
DMRT1	1761	genome.wustl.edu	37	9	847104	847104	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	847104	847104	C	T	SNP	DMRT1	NM_021951	human	genbank	57_37b	+1	reviewed	nonsense	c.499	p.Q167*	0.783	NULL	superfamily_Cysteine-rich DNA binding domain (DM domain),HMMPfam_DM,HMMSmart_SM00301,PatternScan_DM_1	-	no_errors	
DNAH5	1767	genome.wustl.edu	37	5	13752344	13752344	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	13752344	13752344	G	C	SNP	DNAH5	NM_001369	human	genbank	57_37b	-1	reviewed	missense	c.10927	p.L3643V	1.000	NULL	HMMPfam_DHC_N1,superfamily_Spectrin,HMMPfam_DHC_N2,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DNAH6	0	genome.wustl.edu	37	2	84777043	84777043	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	84777043	84777043	G	C	SNP	DNAH6	NM_001370	human	genbank	57_37b	+1	validated	missense	c.1347	p.E449D	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DNAJB13	374407	genome.wustl.edu	37	11	73676008	73676008	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	73676008	73676008	C	G	SNP	DNAJB13	NM_153614	human	genbank	57_37b	+1	provisional	silent	c.420	p.V140	0.889	superfamily_HSP40/DnaJ peptide-binding domain	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_DNAJ_1,superfamily_HSP40/DnaJ peptide-binding domain,HMMPfam_DnaJ_C	-	no_errors	
DYSFIP1	116729	genome.wustl.edu	37	17	79792496	79792496	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79792496	79792496	C	T	SNP	DYSFIP1	NM_001007533	human	genbank	57_37b	-1	validated	missense	c.224	p.G75E	1.000	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors	
EMR2	30817	genome.wustl.edu	37	19	14884796	14884796	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14884796	14884796	G	T	SNP	EMR2	NM_013447	human	genbank	57_37b	-1	reviewed	missense	c.153	p.F51L	0.444	HMMSmart_SM00181	HMMSmart_SM00181,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,PatternScan_ASX_HYDROXYL,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors	
ENGASE	64772	genome.wustl.edu	37	17	77075659	77075659	+	Missense_Mutation	SNP	G	G	A	rs36073943	byCluster;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	77075659	77075659	G	A	SNP	ENGASE	NM_001042573	human	genbank	57_37b	+1	validated	missense	c.505	p.V169I	0.988	HMMPfam_Glyco_hydro_85	HMMPfam_Glyco_hydro_85	-		
ENSG00000123908	0	genome.wustl.edu	37	8	141570514	141570514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	141570514	141570514	G	A	SNP	ENSG00000123908	ENST00000220592	human	ensembl	57_37b	-1	known	missense	c.614	p.S205F	1.000	superfamily_PAZ domain,HMMPfam_DUF1785	superfamily_PAZ domain,HMMPfam_DUF1785,HMMPfam_PAZ,superfamily_Ribonuclease H-like,HMMPfam_Piwi	-	no_errors	
ENSG00000183470	0	genome.wustl.edu	37	7	132412276	132412276	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	132412276	132412276	C	G	SNP	ENSG00000183470	ENST00000332558	human	ensembl	57_37b	+1	known	missense	c.128	p.S43C	0.890	NULL	PatternScan_WD_REPEATS_1	-	no_errors	
ENSG00000218227	0	genome.wustl.edu	37	5	177482635	177482635	+	Missense_Mutation	SNP	G	G	A	rs73807340	byCluster	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177482635	177482635	G	A	SNP	ENSG00000218227	ENST00000407744	human	ensembl	57_37b	+1	known	missense	c.31	p.A11T	1.000	superfamily_Ribosomal protein L19 (L19e),HMMPfam_Ribosomal_L19e,PatternScan_RIBOSOMAL_L19E	superfamily_Ribosomal protein L19 (L19e),HMMPfam_Ribosomal_L19e,PatternScan_RIBOSOMAL_L19E	-		
ENSG00000221734	0	genome.wustl.edu	37	9	117554505	117554510	+	RNA	DEL	ACACAC	ACACAC	-	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	ACACAC	ACACAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	117554505	117554510	ACACAC	-	DEL	ENSG00000221734	ENST00000408807	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.007:0.007:0.010:0.012:0.014:0.015	-	-	(deletion:rna[117554474,117554546])	no_errors	
ENSG00000228672	0	genome.wustl.edu	37	5	138728026	138728026	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	138728026	138728026	C	T	SNP	ENSG00000228672	ENST00000434752	human	ensembl	57_37b	-1	known	silent	c.1062	p.E354	0.998	NULL	NULL	-	no_errors	
ENSG00000232871	0	genome.wustl.edu	37	19	49183705	49183705	+	Missense_Mutation	SNP	G	G	A	rs3826846	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49183705	49183705	G	A	SNP	ENSG00000232871	ENST00000430145	human	ensembl	57_37b	+1	known	missense	c.725	p.R242H	0.109	HMMPfam_Glyco_transf_11	HMMPfam_Glyco_transf_11	-		
ENSG00000246587	0	genome.wustl.edu	37	4	68501140	68501140	+	RNA	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	68501140	68501140	G	C	SNP	ENSG00000246587	ENST00000501780	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	
ENSG00000247865	0	genome.wustl.edu	37	15	63901266	63901266	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	63901266	63901266	G	A	SNP	ENSG00000247865	ENST00000501863	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
EYS	346007	genome.wustl.edu	37	6	65301057	65301057	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	65301057	65301057	C	T	SNP	EYS	NM_001142800	human	genbank	57_37b	-1	reviewed	missense	c.4703	p.R1568H	1.000	superfamily_Concanavalin A-like lectins/glucanases	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
FAM123B	139285	genome.wustl.edu	37	X	63409936	63409936	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	63409936	63409936	A	G	SNP	FAM123B	NM_152424	human	genbank	57_37b	-1	validated	silent	c.3231	p.P1077	1.000	NULL	HMMPfam_WTX	-	no_errors	
FAM188A	80013	genome.wustl.edu	37	10	15858876	15858876	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	15858876	15858876	C	T	SNP	FAM188A	NM_024948	human	genbank	57_37b	-1	validated	nonsense	c.840	p.W280*	1.000	NULL	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_EF-hand	-	no_errors	
FAM60A	58516	genome.wustl.edu	37	12	31451107	31451107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	31451107	31451107	C	T	SNP	FAM60A	NM_001135811	human	genbank	57_37b	-1	validated	missense	c.32	p.R11Q	1.000	NULL	NULL	-	no_errors	
FKBP10	60681	genome.wustl.edu	37	17	39977965	39977965	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39977965	39977965	G	A	SNP	FKBP10	NM_021939	human	genbank	57_37b	+1	reviewed	missense	c.1459	p.D487N	1.000	NULL	superfamily_SSF54534,HMMPfam_FKBP_C,superfamily_SSF47473,HMMSmart_EFh,PatternScan_EF_HAND_1,PatternScan_ER_TARGET	-	no_errors	
FLII	2314	genome.wustl.edu	37	17	18157406	18157406	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	18157406	18157406	C	T	SNP	FLII	NM_002018	human	genbank	57_37b	-1	reviewed	silent	c.666	p.L222	1.000	superfamily_SSF52058	superfamily_SSF52047,HMMPfam_LRR_1,superfamily_SSF52058,HMMSmart_LRR_TYP,superfamily_SSF55753,HMMSmart_GEL,HMMPfam_Gelsolin	-	no_errors	
FOXA1	3169	genome.wustl.edu	37	14	38061250	38061250	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	38061250	38061250	G	A	SNP	FOXA1	NM_004496	human	genbank	57_37b	-1	reviewed	missense	c.739	p.H247Y	1.000	HMMSmart_FH,superfamily_SSF46785,HMMPfam_Fork_head	HMMPfam_Fork_head_N,HMMSmart_FH,superfamily_SSF46785,PatternScan_FORK_HEAD_1,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2,HMMPfam_HNF_C	-	no_errors	
FSTL5	56884	genome.wustl.edu	37	4	163032438	163032438	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	163032438	163032438	C	T	SNP	FSTL5	NM_020116	human	genbank	57_37b	-1	validated	missense	c.111	p.M37I	0.167	NULL	PatternScan_KAZAL,superfamily_SSF100895,HMMSmart_KAZAL,HMMPfam_Kazal_1,HMMPfam_efhand,superfamily_SSF47473,PatternScan_EF_HAND_1,superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMPfam_I-set,superfamily_Amine_DH_B_like	-	no_errors	
GDF9	2661	genome.wustl.edu	37	5	132197896	132197896	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	132197896	132197896	C	G	SNP	GDF9	NM_005260	human	genbank	57_37b	-1	reviewed	missense	c.750	p.Q250H	0.000	NULL	superfamily_SSF57501,HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1	-	no_errors	
GFRA2	2675	genome.wustl.edu	37	8	21608226	21608226	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	21608226	21608226	G	T	SNP	GFRA2	NM_001495	human	genbank	57_37b	-1	reviewed	missense	c.668	p.S223Y	1.000	superfamily_GDNF receptor-like (Pfam 02351),HMMPfam_GDNF	HMMPfam_GDNF,superfamily_GDNF receptor-like (Pfam 02351)	-	no_errors	
GPS2	2874	genome.wustl.edu	37	17	7217617	7217617	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7217617	7217617	C	-	DEL	GPS2	NM_004489	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.310	p.E104fs	1.000	NULL	NULL	(deletion:cds_exon[7217610,7217722])	no_errors	
HEATR7A	0	genome.wustl.edu	37	8	145255363	145255363	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145255363	145255363	C	T	SNP	HEATR7A	NM_032450	human	genbank	57_37b	+1	provisional	silent	c.1060	p.L354	0.991	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
HLA-G	3135	genome.wustl.edu	37	6	29796381	29796381	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29796381	29796381	C	T	SNP	HLA-G	NM_002127	human	genbank	57_37b	+1	reviewed	silent	c.405	p.R135	0.010	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors	
HOMER2	9455	genome.wustl.edu	37	15	83518532	83518532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	83518532	83518532	C	T	SNP	HOMER2	NM_199330	human	genbank	57_37b	-1	reviewed	missense	c.1000	p.D334N	1.000	NULL	HMMPfam_WH1,HMMSmart_SM00461,superfamily_PH domain-like	-	no_errors	
HPS1	3257	genome.wustl.edu	37	10	100191027	100191027	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	100191027	100191027	G	A	SNP	HPS1	NM_000195	human	genbank	57_37b	-1	reviewed	missense	c.529	p.P177S	1.000	NULL	NULL	-	no_errors	
HRC	3270	genome.wustl.edu	37	19	49657744	49657744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49657744	49657744	C	T	SNP	HRC	NM_002152	human	genbank	57_37b	-1	reviewed	missense	c.751	p.D251N	0.685	HMMPfam_Hist_rich_Ca-bd	HMMPfam_Hist_rich_Ca-bd	-	no_errors	
HRC	3270	genome.wustl.edu	37	19	49657822	49657822	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49657822	49657822	C	A	SNP	HRC	NM_002152	human	genbank	57_37b	-1	reviewed	nonsense	c.673	p.E225*	0.972	HMMPfam_Hist_rich_Ca-bd	HMMPfam_Hist_rich_Ca-bd	-	no_errors	
HSF1	3297	genome.wustl.edu	37	8	145537880	145537880	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145537880	145537880	G	A	SNP	HSF1	NM_005526	human	genbank	57_37b	+1	reviewed	missense	c.1477	p.E493K	1.000	HMMPfam_Vert_HS_TF	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00415,HMMPfam_HSF_DNA-bind,PatternScan_HSF_DOMAIN,HMMPfam_Vert_HS_TF"	-	no_errors	
HSP90AB2P	391634	genome.wustl.edu	37	4	13338435	13338435	+	RNA	SNP	G	G	A	rs58551136	byCluster;byFrequency;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	13338435	13338435	G	A	SNP	HSP90AB2P	NR_003132	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.995	-	-	-		
IL3RA	3563	genome.wustl.edu	37	X	1497591	1497591	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	1497591	1497591	G	A	SNP	IL3RA	NM_002183	human	genbank	57_37b	+1	reviewed	missense	c.914	p.R305Q	0.006	NULL	superfamily_FN_III-like,HMMPfam_Haemat_rec_S_F2,PatternScan_HEMATOPO_REC_S_F2	-	no_errors	
IRX2	153572	genome.wustl.edu	37	5	2749057	2749057	+	Missense_Mutation	SNP	C	C	A	rs76906087	byCluster;byFrequency;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	2749057	2749057	C	A	SNP	IRX2	NM_001134222	human	genbank	57_37b	-1	validated	missense	c.765	p.E255D	1.000	NULL	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMSmart_IRO	-		
ITGA10	8515	genome.wustl.edu	37	1	145538042	145538042	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145538042	145538042	C	A	SNP	ITGA10	NM_003637	human	genbank	57_37b	+1	reviewed	silent	c.2721	p.V907	0.983	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains	-	no_errors	
KCND2	3751	genome.wustl.edu	37	7	120387763	120387763	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	120387763	120387763	G	C	SNP	KCND2	NM_012281	human	genbank	57_37b	+1	reviewed	missense	c.1744	p.E582Q	1.000	NULL	superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
KCNV2	169522	genome.wustl.edu	37	9	2729631	2729631	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	2729631	2729631	G	A	SNP	KCNV2	NM_133497	human	genbank	57_37b	+1	reviewed	silent	c.1542	p.E514	0.384	superfamily_SSF81324	superfamily_BTB/POZ_fold,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans	-	no_errors	
KIF1A	547	genome.wustl.edu	37	2	241712662	241712662	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	241712662	241712662	C	A	SNP	KIF1A	NM_004321	human	genbank	57_37b	-1	reviewed	missense	c.1049	p.R350L	1.000	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
KIF5A	3798	genome.wustl.edu	37	12	57969055	57969055	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57969055	57969055	G	A	SNP	KIF5A	NM_004984	human	genbank	57_37b	+1	reviewed	silent	c.1905	p.Q635	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_Prefoldin	-	no_errors	
KLHDC9	126823	genome.wustl.edu	37	1	161068836	161068836	+	Missense_Mutation	SNP	A	A	C	rs11576830	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	161068836	161068836	A	C	SNP	KLHDC9	NM_152366	human	genbank	57_37b	+1	validated	missense	c.511	p.S171R	0.001	superfamily_Galactose oxidase central domain	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMPfam_Kelch_2	-		
KLHL11	55175	genome.wustl.edu	37	17	40021290	40021290	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40021290	40021290	G	A	SNP	KLHL11	NM_018143	human	genbank	57_37b	-1	provisional	missense	c.334	p.R112C	1.000	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_oxid_central,HMMSmart_Kelch,HMMPfam_Kelch_1	-	no_errors	
LAMA2	3908	genome.wustl.edu	37	6	129781390	129781390	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	129781390	129781390	G	C	SNP	LAMA2	NM_000426	human	genbank	57_37b	+1	reviewed	missense	c.6913	p.E2305Q	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_1	HMMSmart_LamNT,HMMPfam_Laminin_N,superfamily_Gal_bind_like,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,PatternScan_EGF_LAM_1,superfamily_SSF57196,PatternScan_EGF_2,HMMSmart_LamB,HMMPfam_Laminin_B,HMMPfam_Laminin_I,superfamily_SSF56399,HMMPfam_Laminin_II,HMMSmart_LamG,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-	no_errors	
LARP7	51574	genome.wustl.edu	37	4	113568490	113568490	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	113568490	113568490	C	G	SNP	LARP7	NM_015454	human	genbank	57_37b	+1	validated	missense	c.782	p.S261C	0.998	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00715,HMMPfam_La,superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMPfam_RRM_3"	-	no_errors	
LBA1	9881	genome.wustl.edu	37	3	36902452	36902452	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	36902452	36902452	G	A	SNP	LBA1	ENST00000428977	human	ensembl	57_37b	-1	known	silent	c.1308	p.L436	0.801	superfamily_ANK	superfamily_SSF48452,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_SSF52540	-	no_errors	
LBA1	9881	genome.wustl.edu	37	3	36902596	36902596	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	36902596	36902596	G	C	SNP	LBA1	ENST00000428977	human	ensembl	57_37b	-1	known	missense	c.1164	p.F388L	1.000	superfamily_ANK	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK,superfamily_SSF48452,superfamily_SSF52540	-	no_errors	
LOC100289270	0	genome.wustl.edu	37	3	51743248	51743248	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51743248	51743248	C	T	SNP	LOC100289270	XM_002342357	human	genbank	57_37b	-1	model	missense	c.43	p.A15T	0.998	NULL	NULL	-	no_errors	
LOC100294141	0	genome.wustl.edu	37	6	3081579	3081579	+	RNA	SNP	G	G	A	rs11242823	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	3081579	3081579	G	A	SNP	LOC100294141	XR_078640	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.000	-	-	-		
LOC729952	729952	genome.wustl.edu	37	1	164326453	164326453	+	RNA	SNP	G	G	C	rs10917988	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	164326453	164326453	G	C	SNP	LOC729952	XR_015724	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-		
LPL	4023	genome.wustl.edu	37	8	19818493	19818493	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	19818493	19818493	C	G	SNP	LPL	ENST00000311322	human	ensembl	57_37b	+1	known	silent	c.1221	p.L407	0.154	superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308	superfamily_alpha/beta-Hydrolases,HMMPfam_Lipase,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308	-	no_errors	
LRCH1	23143	genome.wustl.edu	37	13	47286664	47286664	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	47286664	47286664	G	C	SNP	LRCH1	NM_015116	human	genbank	57_37b	+1	validated	missense	c.1586	p.R529T	0.114	NULL	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00364,PatternScan_PTS_HPR_SER,superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033	-	no_errors	
LRCH2	57631	genome.wustl.edu	37	X	114391183	114391183	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	114391183	114391183	G	A	SNP	LRCH2	NM_020871	human	genbank	57_37b	-1	validated	missense	c.1511	p.T504I	0.406	NULL	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_Calponin-homology,HMMPfam_CH,HMMSmart_CH	-	no_errors	
LRRC27	80313	genome.wustl.edu	37	10	134165200	134165200	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	134165200	134165200	G	A	SNP	LRRC27	NM_001143757	human	genbank	57_37b	+1	validated	missense	c.1016	p.R339Q	0.002	NULL	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors	
MAGI2	9863	genome.wustl.edu	37	7	77885377	77885377	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77885377	77885377	C	T	SNP	MAGI2	NM_012301	human	genbank	57_37b	-1	reviewed	missense	c.1930	p.D644N	1.000	superfamily_PDZ domain-like,HMMSmart_SM00228,HMMPfam_PDZ	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1	-	no_errors	
MAST4	23227	genome.wustl.edu	37	5	66396326	66396326	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	66396326	66396326	C	G	SNP	MAST4	NM_015183	human	genbank	57_37b	+1	validated	missense	c.409	p.H137D	1.000	HMMPfam_DUF1908	HMMPfam_DUF1908,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ	-	no_errors	
MCF2L2	23101	genome.wustl.edu	37	3	183041052	183041052	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	183041052	183041052	G	A	SNP	MCF2L2	NM_015078	human	genbank	57_37b	-1	validated	missense	c.574	p.R192C	0.997	NULL	HMMSmart_SM00516,superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
MEGF6	1953	genome.wustl.edu	37	1	3519148	3519148	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	3519148	3519148	C	G	SNP	MEGF6	NM_001409	human	genbank	57_37b	-1	validated	missense	c.148	p.E50Q	0.915	HMMPfam_EMI	HMMPfam_EMI,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,HMMPfam_EGF_2,HMMSmart_SM00180,HMMPfam_Laminin_EGF,superfamily_Growth factor receptor domain	-	no_errors	
MS4A13	503497	genome.wustl.edu	37	11	60292781	60292781	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	60292781	60292781	C	T	SNP	MS4A13	NM_001012417	human	genbank	57_37b	+1	validated	silent	c.288	p.Y96	0.871	HMMPfam_CD20	HMMPfam_CD20	-	no_errors	
MTR	4548	genome.wustl.edu	37	1	236988693	236988693	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	236988693	236988693	C	T	SNP	MTR	NM_000254	human	genbank	57_37b	+1	reviewed	silent	c.921	p.H307	0.798	superfamily_Homocysteine S-methyltransferase,HMMPfam_S-methyl_trans	superfamily_Homocysteine S-methyltransferase,HMMPfam_S-methyl_trans,HMMPfam_Pterin_bind,superfamily_Dihydropteroate synthetase-like,superfamily_Methionine synthase domain,HMMPfam_B12-binding_2,superfamily_Cobalamin (vitamin B12)-binding domain,HMMPfam_B12-binding,superfamily_Methionine synthase activation domain-like,HMMPfam_Met_synt_B12	-	no_errors	
MYB	4602	genome.wustl.edu	37	6	135515023	135515036	+	Frame_Shift_Del	DEL	CAATGTCCCTCAGC	CAATGTCCCTCAGC	-	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	CAATGTCCCTCAGC	CAATGTCCCTCAGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	135515023	135515036	CAATGTCCCTCAGC	-	DEL	MYB	NM_001130173	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.810_823	p.N271fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_Wos2	HMMSmart_SM00717,HMMPfam_Myb_DNA-binding,superfamily_Homeodomain-like,HMMPfam_Wos2,HMMPfam_Cmyb_C	(deletion:cds_exon[135514976,135515056])	no_errors	
NBPF10	440673	genome.wustl.edu	37	1	145299900	145299900	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145299900	145299900	C	G	SNP	NBPF10	NM_001039703	human	genbank	57_37b	+1	validated	missense	c.949	p.Q317E	0.000	NULL	HMMPfam_DUF1220	-	no_errors	
NCF2	4688	genome.wustl.edu	37	1	183542412	183542412	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	183542412	183542412	C	T	SNP	NCF2	NM_000433	human	genbank	57_37b	-1	reviewed	missense	c.517	p.E173K	0.996	superfamily_SSF48452	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF54277,HMMPfam_PB1,HMMSmart_PB1	-	no_errors	
NHS	4810	genome.wustl.edu	37	X	17746433	17746433	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	17746433	17746433	G	A	SNP	NHS	NM_198270	human	genbank	57_37b	+1	reviewed	missense	c.4144	p.E1382K	0.990	NULL	NULL	-	no_errors	
NOX4	50507	genome.wustl.edu	37	11	89135609	89135609	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	89135609	89135609	G	C	SNP	NOX4	NM_016931	human	genbank	57_37b	-1	reviewed	nonsense	c.731	p.S244*	0.158	NULL	HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors	
NPEPPS	9520	genome.wustl.edu	37	17	45664628	45664628	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	45664628	45664628	C	G	SNP	NPEPPS	NM_006310	human	genbank	57_37b	+1	reviewed	missense	c.1013	p.S338C	1.000	HMMPfam_Peptidase_M1,superfamily_SSF55486	superfamily_SSF63737,HMMPfam_Peptidase_M1,superfamily_SSF55486,PatternScan_ZINC_PROTEASE	-	no_errors	
NQO2	4835	genome.wustl.edu	37	6	3017179	3017179	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	3017179	3017179	G	A	SNP	NQO2	NM_000904	human	genbank	57_37b	+1	validated	missense	c.479	p.G160E	0.760	HMMPfam_Flavodoxin_2,superfamily_Flavoproteins	HMMPfam_Flavodoxin_2,superfamily_Flavoproteins	-	no_errors	
NRP1	8829	genome.wustl.edu	37	10	33502481	33502481	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	33502481	33502481	C	T	SNP	NRP1	NM_003873	human	genbank	57_37b	-1	validated	missense	c.1447	p.E483K	0.998	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1	-	no_errors	
OPRL1	4987	genome.wustl.edu	37	20	62730133	62730133	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62730133	62730133	C	T	SNP	OPRL1	NM_000913	human	genbank	57_37b	+1	reviewed	missense	c.1094	p.T365M	0.000	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR14I1	401994	genome.wustl.edu	37	1	248845388	248845388	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248845388	248845388	G	C	SNP	OR14I1	NM_001004734	human	genbank	57_37b	-1	provisional	nonsense	c.218	p.S73*	0.002	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2B11	127623	genome.wustl.edu	37	1	247614687	247614687	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	247614687	247614687	C	T	SNP	OR2B11	NM_001004492	human	genbank	57_37b	-1	provisional	missense	c.598	p.D200N	0.044	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR4F15	390649	genome.wustl.edu	37	15	102358587	102358587	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	102358587	102358587	C	G	SNP	OR4F15	NM_001001674	human	genbank	57_37b	+1	provisional	silent	c.198	p.L66	0.999	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OTUD6A	139562	genome.wustl.edu	37	X	69283015	69283015	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69283015	69283015	C	T	SNP	OTUD6A	NM_207320	human	genbank	57_37b	+1	provisional	missense	c.641	p.T214M	0.000	superfamily_SSF54001,HMMPfam_OTU	superfamily_SSF54001,HMMPfam_OTU	-	no_errors	
PAX3	5077	genome.wustl.edu	37	2	223158461	223158461	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	223158461	223158461	G	A	SNP	PAX3	NM_013942	human	genbank	57_37b	-1	reviewed	missense	c.602	p.S201F	0.000	NULL	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like,PatternScan_PAIRED_1	-	no_errors	
PCDHGA11	56105	genome.wustl.edu	37	5	140802020	140802020	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140802020	140802020	G	A	SNP	PCDHGA11	NM_018914	human	genbank	57_37b	+1	reviewed	missense	c.1226	p.R409K	0.005	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A	rs104886003	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178936091	178936091	G	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1633	p.E545K	1.000	superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-		
PIK3CB	5291	genome.wustl.edu	37	3	138426040	138426040	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	138426040	138426040	C	G	SNP	PIK3CB	NM_006219	human	genbank	57_37b	-1	provisional	missense	c.1491	p.E497D	0.995	superfamily_C2_CaLB	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PIM2	11040	genome.wustl.edu	37	X	48771429	48771429	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48771429	48771429	C	G	SNP	PIM2	NM_006875	human	genbank	57_37b	-1	reviewed	missense	c.915	p.L305F	0.001	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
PLK3	1263	genome.wustl.edu	37	1	45271021	45271021	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45271021	45271021	C	T	SNP	PLK3	NM_004073	human	genbank	57_37b	+1	validated	silent	c.1719	p.L573	0.001	superfamily_Polo-box domain,HMMPfam_POLO_box	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_Polo-box domain,HMMPfam_POLO_box	-	no_errors	
PLK3	1263	genome.wustl.edu	37	1	45271308	45271308	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45271308	45271308	C	G	SNP	PLK3	NM_004073	human	genbank	57_37b	+1	validated	silent	c.1899	p.L633	0.003	HMMPfam_POLO_box,superfamily_Polo-box domain	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,HMMPfam_POLO_box,superfamily_Polo-box domain	-	no_errors	
PLXDC1	57125	genome.wustl.edu	37	17	37265502	37265502	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	37265502	37265502	G	A	SNP	PLXDC1	NM_020405	human	genbank	57_37b	-1	validated	missense	c.398	p.S133L	1.000	NULL	HMMPfam_PSI	-	no_errors	
PPP1R3A	5506	genome.wustl.edu	37	7	113558451	113558451	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	113558451	113558451	C	G	SNP	PPP1R3A	NM_002711	human	genbank	57_37b	-1	reviewed	missense	c.601	p.D201H	1.000	HMMPfam_CBM_21	HMMPfam_CBM_21	-	no_errors	
PRMT10	90826	genome.wustl.edu	37	4	148564057	148564057	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	148564057	148564057	G	A	SNP	PRMT10	NM_138364	human	genbank	57_37b	-1	provisional	nonsense	c.2080	p.Q694*	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_TPR-like,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors	
RAB37	326624	genome.wustl.edu	37	17	72739463	72739463	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72739463	72739463	C	G	SNP	RAB37	NM_001006638	human	genbank	57_37b	+1	validated	missense	c.350	p.S117C	1.000	superfamily_SSF52540,HMMPfam_Ras,HMMSmart_RAB	superfamily_SSF52540,HMMPfam_Ras,HMMSmart_RAB	-	no_errors	
RARB	5915	genome.wustl.edu	37	3	25502710	25502710	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	25502710	25502710	G	C	SNP	RARB	NM_000965	human	genbank	57_37b	+1	reviewed	missense	c.184	p.E62Q	1.000	NULL	superfamily_SSF57716,HMMSmart_ZnF_C4,HMMPfam_zf-C4,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep	-	no_errors	
RNF121	55298	genome.wustl.edu	37	11	71706538	71706538	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	71706538	71706538	G	C	SNP	RNF121	NM_018320	human	genbank	57_37b	+1	reviewed	missense	c.804	p.K268N	1.000	superfamily_SSF57850,HMMSmart_RING	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMSmart_RING	-	no_errors	
SCN1A	6323	genome.wustl.edu	37	2	166848244	166848244	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	166848244	166848244	G	C	SNP	SCN1A	NM_006920	human	genbank	57_37b	-1	reviewed	silent	c.5508	p.L1836	0.872	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ,PatternScan_RIBONUCLEASE_P	-	no_errors	
SEC24B	10427	genome.wustl.edu	37	4	110448569	110448569	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	110448569	110448569	C	T	SNP	SEC24B	NM_006323	human	genbank	57_37b	+1	reviewed	silent	c.3057	p.I1019	1.000	superfamily_Helical domain of Sec23/24,HMMPfam_Sec23_helical	PatternScan_MIP,superfamily_beta-sandwich domain of Sec23/24,superfamily_Zn-finger domain of Sec23/24,HMMPfam_zf-Sec23_Sec24,HMMPfam_Sec23_trunk,superfamily_vWA-like,HMMPfam_Sec23_BS,superfamily_Helical domain of Sec23/24,HMMPfam_Sec23_helical,superfamily_C-terminal gelsolin-like domain of Sec23/24,HMMPfam_Gelsolin	-	no_errors	
SFRS1	6426	genome.wustl.edu	37	17	56084325	56084325	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	56084325	56084325	G	A	SNP	SFRS1	NM_006924	human	genbank	57_37b	-1	reviewed	silent	c.174	p.F58	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
SFRS15	57466	genome.wustl.edu	37	21	33043723	33043724	+	Frame_Shift_Ins	INS	-	-	CT	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	33043723	33043724	-	CT	INS	SFRS15	NM_020706	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.3433_3432	p.A1144fs	1.000:1.000	NULL	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618,superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
SLK	9748	genome.wustl.edu	37	10	105779531	105779531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105779531	105779531	G	A	SNP	SLK	NM_014720	human	genbank	57_37b	+1	provisional	missense	c.3172	p.E1058K	1.000	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
SLK	9748	genome.wustl.edu	37	10	105779657	105779657	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	105779657	105779657	C	G	SNP	SLK	NM_014720	human	genbank	57_37b	+1	provisional	missense	c.3298	p.Q1100E	1.000	superfamily_Protein kinase-like (PK-like)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase	-	no_errors	
SMARCA1	6594	genome.wustl.edu	37	X	128631942	128631942	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	128631942	128631942	G	C	SNP	SMARCA1	NM_003069	human	genbank	57_37b	-1	reviewed	missense	c.1384	p.H462D	1.000	HMMPfam_SNF2_N	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HAND,superfamily_HAND domain of the nucleosome remodeling ATPase ISWI,HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_SLIDE	-	no_errors	
SMPD1	6609	genome.wustl.edu	37	11	6412017	6412017	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6412017	6412017	T	G	SNP	SMPD1	NM_000543	human	genbank	57_37b	+1	reviewed	silent	c.189	p.P63	0.434	NULL	superfamily_Saposin,HMMSmart_SM00741,HMMPfam_Metallophos,superfamily_Metallo-dependent phosphatases	-	no_errors	
SNX13	23161	genome.wustl.edu	37	7	17913164	17913164	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	17913164	17913164	C	T	SNP	SNX13	NM_015132	human	genbank	57_37b	-1	reviewed	missense	c.740	p.R247Q	1.000	HMMPfam_PXA,HMMSmart_SM00313	HMMPfam_PXA,HMMSmart_SM00313,superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315,superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,HMMPfam_Nexin_C	-	no_errors	
SRP72	6731	genome.wustl.edu	37	4	57355616	57355616	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	57355616	57355616	C	T	SNP	SRP72	NM_006947	human	genbank	57_37b	+1	validated	silent	c.1287	p.F429	1.000	superfamily_SSF48452	superfamily_SSF48452,HMMPfam_TPR_1,HMMPfam_SRP72	-	no_errors	
STAT5B	6777	genome.wustl.edu	37	17	40370189	40370189	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40370189	40370189	G	C	SNP	STAT5B	NM_012448	human	genbank	57_37b	-1	reviewed	silent	c.1149	p.L383	1.000	HMMPfam_STAT_bind,superfamily_P53_like_DNA_bnd	superfamily_STAT,HMMPfam_STAT_int,HMMPfam_STAT_alpha,HMMPfam_STAT_bind,superfamily_P53_like_DNA_bnd,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	-	no_errors	
TAB3	257397	genome.wustl.edu	37	X	30872359	30872359	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	30872359	30872359	C	G	SNP	TAB3	NM_152787	human	genbank	57_37b	-1	reviewed	missense	c.1423	p.E475Q	1.000	NULL	HMMPfam_CUE,HMMSmart_SM00546,superfamily_NZF domain,HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1	-	no_errors	
TAF1L	138474	genome.wustl.edu	37	9	32633918	32633918	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	32633918	32633918	G	C	SNP	TAF1L	NM_153809	human	genbank	57_37b	-1	provisional	missense	c.1660	p.L554V	0.998	NULL	HMMPfam_TBP-binding,superfamily_TAF_II_230,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
TCP11L2	255394	genome.wustl.edu	37	12	106734763	106734763	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	106734763	106734763	C	G	SNP	TCP11L2	NM_152772	human	genbank	57_37b	+1	provisional	missense	c.1302	p.I434M	0.856	HMMPfam_Tcp11	HMMPfam_Tcp11	-	no_errors	
TGDS	23483	genome.wustl.edu	37	13	95232153	95232153	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	95232153	95232153	C	T	SNP	TGDS	NM_014305	human	genbank	57_37b	-1	validated	missense	c.610	p.E204K	1.000	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Epimerase	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Epimerase	-	no_errors	
TGM4	7047	genome.wustl.edu	37	3	44945471	44945471	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	44945471	44945471	G	A	SNP	TGM4	NM_003241	human	genbank	57_37b	+1	validated	missense	c.1067	p.R356Q	0.937	superfamily_SSF54001	superfamily_Ig_E-set,HMMPfam_Transglut_N,superfamily_SSF54001,HMMSmart_TGc,PatternScan_TRANSGLUTAMINASES,HMMPfam_Transglut_core,superfamily_Transglut_C,HMMPfam_Transglut_C	-	no_errors	
THAP7	80764	genome.wustl.edu	37	22	21354267	21354267	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	21354267	21354267	C	G	SNP	THAP7	NM_001008695	human	genbank	57_37b	-1	validated	missense	c.832	p.E278Q	1.000	NULL	HMMPfam_THAP,HMMSmart_DM3	-	no_errors	
THOC2	57187	genome.wustl.edu	37	X	122820419	122820419	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	122820419	122820419	C	T	SNP	THOC2	NM_001081550	human	genbank	57_37b	-1	validated	silent	c.747	p.G249	0.652	NULL	NULL	-	no_errors	
TINAG	27283	genome.wustl.edu	37	6	54191643	54191643	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	54191643	54191643	G	C	SNP	TINAG	NM_014464	human	genbank	57_37b	+1	validated	missense	c.553	p.E185Q	1.000	superfamily_Cysteine proteinases	HMMSmart_SM00201,PatternScan_SMB_1,superfamily_Cysteine proteinases,HMMSmart_SM00645,HMMPfam_Peptidase_C1,PatternScan_THIOL_PROTEASE_ASN	-	no_errors	
TMEM146	257062	genome.wustl.edu	37	19	5724831	5724831	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5724831	5724831	G	A	SNP	TMEM146	NM_152784	human	genbank	57_37b	+1	validated	silent	c.84	p.V28	0.991	NULL	NULL	-	no_errors	
TOMM20L	387990	genome.wustl.edu	37	14	58875253	58875253	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	58875253	58875253	G	C	SNP	TOMM20L	NM_207377	human	genbank	57_37b	+1	validated	missense	c.412	p.E138Q	1.000	HMMPfam_MAS20,superfamily_MAS20_rcpt	HMMPfam_MAS20,superfamily_MAS20_rcpt	-	no_errors	
TPCN1	53373	genome.wustl.edu	37	12	113731077	113731077	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113731077	113731077	C	T	SNP	TPCN1	NM_001143819	human	genbank	57_37b	+1	validated	missense	c.2473	p.H825Y	0.026	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,PatternScan_LECTIN_LEGUME_BETA	-	no_errors	
TRAF3IP3	80342	genome.wustl.edu	37	1	209933475	209933475	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	209933475	209933475	G	A	SNP	TRAF3IP3	NM_025228	human	genbank	57_37b	+1	provisional	missense	c.91	p.E31K	0.895	NULL	NULL	-	no_errors	
TRIM25	7706	genome.wustl.edu	37	17	54990828	54990828	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	54990828	54990828	G	A	SNP	TRIM25	NM_005082	human	genbank	57_37b	-1	reviewed	silent	c.522	p.C174	1.000	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
TRPM4	54795	genome.wustl.edu	37	19	49671554	49671554	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49671554	49671554	C	T	SNP	TRPM4	NM_017636	human	genbank	57_37b	+1	provisional	silent	c.486	p.I162	0.389	NULL	HMMPfam_Ion_trans	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179560781	179560781	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179560781	179560781	C	G	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.27286	p.E9096Q	1.000	NULL	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179584560	179584560	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179584560	179584560	C	G	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	splice_site	c.19928-1	e78-1	1.000	-	-	-	no_errors	
UMPS	7372	genome.wustl.edu	37	3	124456998	124456998	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	124456998	124456998	G	C	SNP	UMPS	NM_000373	human	genbank	57_37b	+1	validated	missense	c.894	p.L298F	1.000	superfamily_Ribulose-phoshate binding barrel,HMMPfam_OMPdecase	superfamily_PRTase-like,HMMPfam_Pribosyltran,superfamily_Ribulose-phoshate binding barrel,HMMPfam_OMPdecase,PatternScan_OMPDECASE	-	no_errors	
WDR33	55339	genome.wustl.edu	37	2	128476996	128476996	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	128476996	128476996	G	C	SNP	WDR33	NM_018383	human	genbank	57_37b	-1	reviewed	missense	c.2603	p.S868C	0.939	NULL	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,HMMPfam_Collagen	-	no_errors	
ZNF567	163081	genome.wustl.edu	37	19	37211247	37211247	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0SY-01	TCGA-A2-A0SY-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37211247	37211247	T	A	SNP	ZNF567	NM_152603	human	genbank	57_37b	+1	provisional	missense	c.1528	p.S510T	1.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
