Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA13	154664	broad.mit.edu	37	7	48556346	48556346	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARID5B	84159	broad.mit.edu	37	10	63851221	63851221	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP13A4	84239	broad.mit.edu	37	3	193177001	193177001	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169391358	169391358	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CD300E	342510	broad.mit.edu	37	17	72610086	72610086	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLDN4	1364	broad.mit.edu	37	7	73246086	73246086	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197390735	197390735	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107974931	107974931	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15794430	15794430	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21908580	21908580	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21920474	21920474	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28934518	28934518	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSG2	1829	broad.mit.edu	37	18	29116293	29116293	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EFCAB2	84288	broad.mit.edu	37	1	245222709	245222709	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EPHX1	2052	broad.mit.edu	37	1	226032237	226032237	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FANCF	2188	broad.mit.edu	37	11	22646829	22646829	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FGA	2243	broad.mit.edu	37	4	155507521	155507521	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47788664	47788669	+	In_Frame_Del	DEL	GGTGGT	-	-	rs59413596	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	GGTGGT	GGTGGT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GLYATL1	92292	broad.mit.edu	37	11	58711084	58711084	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GRIN2A	2903	broad.mit.edu	37	16	9857569	9857569	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GUCY1A3	2982	broad.mit.edu	37	4	156632326	156632326	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HSPA5	3309	broad.mit.edu	37	9	127998975	127998975	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IGFL4	444882	broad.mit.edu	37	19	46543533	46543533	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113379013	113379013	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRRC30	339291	broad.mit.edu	37	18	7232028	7232028	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39934334	39934334	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MLX	6945	broad.mit.edu	37	17	40720575	40720575	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MSH4	4438	broad.mit.edu	37	1	76363675	76363675	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTMR10	54893	broad.mit.edu	37	15	31282988	31282988	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NNT	23530	broad.mit.edu	37	5	43677827	43677827	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57335855	57335855	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3102700	3102700	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PTEN	5728	broad.mit.edu	37	10	89711891	89711891	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASGEF1B	153020	broad.mit.edu	37	4	82355851	82355851	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RCL1	10171	broad.mit.edu	37	9	4826861	4826861	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130926846	130926846	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMCHD1	23347	broad.mit.edu	37	18	2722637	2722637	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66472256	66472256	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42173407	42173407	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188296	10188296	+	Frame_Shift_Del	DEL	A	-	-	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZC3H11A	9877	broad.mit.edu	37	1	203816426	203816426	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZDHHC19	131540	broad.mit.edu	37	3	195934301	195934301	+	Frame_Shift_Del	DEL	C	-	-	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF280C	55609	broad.mit.edu	37	X	129343630	129343631	+	Missense_Mutation	DNP	AG	TA	TA	novel	unknown	TCGA-A3-3316-01	TCGA-A3-3316-01	AG	AG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
