Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACCN2	41	broad.mit.edu	37	12	50453582	50453582	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACCS	84680	broad.mit.edu	37	11	44096169	44096169	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86791045	86791045	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33068660	33068660	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AMN	81693	broad.mit.edu	37	14	103389067	103389067	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97784175	97784175	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ARSB	411	broad.mit.edu	37	5	78076227	78076227	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATG2A	23130	broad.mit.edu	37	11	64673943	64673943	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BAP1	8314	broad.mit.edu	37	3	52438515	52438515	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BMX	660	broad.mit.edu	37	X	15549469	15549469	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C10orf76	79591	broad.mit.edu	37	10	103750317	103750317	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C16orf71	146562	broad.mit.edu	37	16	4794979	4794979	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169391155	169391155	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CARS	833	broad.mit.edu	37	11	3050597	3050597	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CBX8	57332	broad.mit.edu	37	17	77768913	77768913	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61689382	61689382	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHIT1	1118	broad.mit.edu	37	1	203186906	203186906	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175612868	175612868	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CILP2	148113	broad.mit.edu	37	19	19653420	19653420	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76486631	76486631	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DMAP1	55929	broad.mit.edu	37	1	44684379	44684379	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21033334	21033334	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63084419	63084419	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28651758	28651758	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EHD2	30846	broad.mit.edu	37	19	48219929	48219929	+	Silent	SNP	G	T	T	rs61746407	by1000genomes	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EIF2AK4	440275	broad.mit.edu	37	15	40299227	40299227	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111463966	111463966	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ERAP1	51752	broad.mit.edu	37	5	96139528	96139528	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99098408	99098408	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FASN	2194	broad.mit.edu	37	17	80041257	80041257	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531377	92531377	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59611470	59611470	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GNAL	2774	broad.mit.edu	37	18	11881031	11881031	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28514431	28514431	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IPO4	79711	broad.mit.edu	37	14	24657425	24657425	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52221113	52221113	+	Silent	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87678467	87678467	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KDM4B	23030	broad.mit.edu	37	19	5137677	5137677	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF1C	10749	broad.mit.edu	37	17	4926964	4926964	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIFC1	3833	broad.mit.edu	37	6	33374604	33374604	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LINGO1	84894	broad.mit.edu	37	15	77906716	77906716	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMO4	8543	broad.mit.edu	37	1	87805242	87805242	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161032706	161032706	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LRFN3	79414	broad.mit.edu	37	19	36430547	36430547	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LYPD5	284348	broad.mit.edu	37	19	44303017	44303017	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47799982	47799982	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86565766	86565766	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NLRP1	22861	broad.mit.edu	37	17	5485273	5485273	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139410507	139410507	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110927475	110927475	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCCA	5095	broad.mit.edu	37	13	100925589	100925589	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHA5	56143	broad.mit.edu	37	5	140202644	140202644	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDLIM4	8572	broad.mit.edu	37	5	131607572	131607572	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216908708	216908708	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHC1	1911	broad.mit.edu	37	12	9075272	9075272	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLA2G4F	255189	broad.mit.edu	37	15	42436668	42436668	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLAC4	191585	broad.mit.edu	37	21	42551343	42551343	+	Silent	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP5C	5536	broad.mit.edu	37	19	46888136	46888136	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PREPL	9581	broad.mit.edu	37	2	44554022	44554022	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PROP1	5626	broad.mit.edu	37	5	177421243	177421243	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRPSAP1	5635	broad.mit.edu	37	17	74324943	74324943	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRR12	57479	broad.mit.edu	37	19	50128736	50128736	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAC1	5879	broad.mit.edu	37	7	6442071	6442071	+	Silent	SNP	G	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RIF1	55183	broad.mit.edu	37	2	152320194	152320194	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SAMD7	344658	broad.mit.edu	37	3	169644942	169644942	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151337664	151337664	+	Splice_Site	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SFRS14	10147	broad.mit.edu	37	19	19136452	19136452	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20676346	20676347	+	Missense_Mutation	DNP	CC	TT	TT	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	CC	CC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70633975	70633975	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMEK2	57223	broad.mit.edu	37	2	55813757	55813757	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPCS3	60559	broad.mit.edu	37	4	177248330	177248330	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ST6GAL2	84620	broad.mit.edu	37	2	107460218	107460218	+	Silent	SNP	C	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123217328	123217328	+	Frame_Shift_Del	DEL	T	-	-	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBC1D15	64786	broad.mit.edu	37	12	72278663	72278663	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TINF2	26277	broad.mit.edu	37	14	24710922	24710922	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNPO2	30000	broad.mit.edu	37	19	12813644	12813644	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TNRC6A	27327	broad.mit.edu	37	16	24800756	24800756	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45522670	45522670	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81609392	81609392	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TTC33	23548	broad.mit.edu	37	5	40716581	40716581	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15531300	15531300	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VENTX	27287	broad.mit.edu	37	10	135053527	135053527	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
WDR46	9277	broad.mit.edu	37	6	33248690	33248691	+	Missense_Mutation	DNP	GT	AA	AA	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	GT	GT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZFAND2B	130617	broad.mit.edu	37	2	220072989	220072989	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF12	7559	broad.mit.edu	37	7	6731607	6731607	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF221	7638	broad.mit.edu	37	19	44471370	44471370	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3317-01	TCGA-A3-3317-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
