Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCC6	368	broad.mit.edu	37	16	16284071	16284071	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ACY1	95	broad.mit.edu	37	3	52012054	52012054	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ALOX12B	242	broad.mit.edu	37	17	7990740	7990740	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ANXA4	307	broad.mit.edu	37	2	70045736	70045736	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ASAP2	8853	broad.mit.edu	37	2	9533614	9533614	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATP5B	506	broad.mit.edu	37	12	57033957	57033957	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C19orf41	126123	broad.mit.edu	37	19	50657881	50657881	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C1orf83	127428	broad.mit.edu	37	1	54562078	54562078	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113539199	113539199	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CCHCR1	54535	broad.mit.edu	37	6	31111166	31111166	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CEL	1056	broad.mit.edu	37	9	135942474	135942474	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CELA3B	23436	broad.mit.edu	37	1	22304925	22304925	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHST8	64377	broad.mit.edu	37	19	34262927	34262927	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLASP2	23122	broad.mit.edu	37	3	33725901	33725901	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238244811	238244811	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPSF4	10898	broad.mit.edu	37	7	99047957	99047957	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CWF19L1	55280	broad.mit.edu	37	10	102006678	102006678	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115137133	115137133	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DENND2D	79961	broad.mit.edu	37	1	111734915	111734916	+	Missense_Mutation	DNP	AG	CT	CT	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	AG	AG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DHX8	1659	broad.mit.edu	37	17	41585811	41585811	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51084867	51084867	+	Silent	SNP	T	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EME1	146956	broad.mit.edu	37	17	48452559	48452559	+	De_novo_Start_OutOfFrame	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ESPL1	9700	broad.mit.edu	37	12	53684167	53684167	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAM124A	220108	broad.mit.edu	37	13	51825776	51825776	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FANCA	2175	broad.mit.edu	37	16	89838183	89838183	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187549318	187549318	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125072866	125072866	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FIZ1	84922	broad.mit.edu	37	19	56109181	56109181	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146672922	146672922	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FSIP1	161835	broad.mit.edu	37	15	40068678	40068678	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GCFC1	94104	broad.mit.edu	37	21	34143766	34143767	+	Missense_Mutation	DNP	CG	TA	TA	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	CG	CG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GGA1	26088	broad.mit.edu	37	22	38010280	38010280	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GON4L	54856	broad.mit.edu	37	1	155753882	155753882	+	Splice_Site	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GTF2H1	2965	broad.mit.edu	37	11	18357301	18357301	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
H1F0	3005	broad.mit.edu	37	22	38201974	38201974	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HDAC1	3065	broad.mit.edu	37	1	32796451	32796451	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIST1H2AK	8330	broad.mit.edu	37	6	27805883	27805883	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HIVEP2	3097	broad.mit.edu	37	6	143081369	143081369	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXC6	3223	broad.mit.edu	37	12	54422672	54422672	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35871222	35871222	+	Silent	SNP	G	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
INTS2	57508	broad.mit.edu	37	17	60004006	60004006	+	Silent	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
IPO4	79711	broad.mit.edu	37	14	24651164	24651164	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITPKA	3706	broad.mit.edu	37	15	41793700	41793700	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCTD18	130535	broad.mit.edu	37	2	201354993	201354993	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1522	57648	broad.mit.edu	37	1	33237800	33237800	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180904820	180904820	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LARP1	23367	broad.mit.edu	37	5	154179286	154179286	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LCN1	3933	broad.mit.edu	37	9	138413417	138413417	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LILRB5	10990	broad.mit.edu	37	19	54758770	54758770	+	Silent	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220752837	220752837	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MDH1	4190	broad.mit.edu	37	2	63834039	63834039	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFRP	83552	broad.mit.edu	37	11	119212284	119212284	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIER1	57708	broad.mit.edu	37	1	67450321	67450321	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MYO5A	4644	broad.mit.edu	37	15	52646191	52646191	+	Silent	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NAT2	10	broad.mit.edu	37	8	18258243	18258243	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCOA5	57727	broad.mit.edu	37	20	44693847	44693847	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NFKBIL2	4796	broad.mit.edu	37	8	145666428	145666428	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144098145	144098145	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NUP35	129401	broad.mit.edu	37	2	184016285	184016285	+	Silent	SNP	A	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR1L1	26737	broad.mit.edu	37	9	125424612	125424612	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ORC1L	4998	broad.mit.edu	37	1	52851529	52851529	+	Silent	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHGB3	56102	broad.mit.edu	37	5	140751901	140751901	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PDXP	57026	broad.mit.edu	37	22	38055358	38055358	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PIP	5304	broad.mit.edu	37	7	142829297	142829297	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3197825	3197825	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLA2G15	23659	broad.mit.edu	37	16	68283347	68283347	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121187276	121187276	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPFIA2	8499	broad.mit.edu	37	12	81675169	81675169	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPWD1	23398	broad.mit.edu	37	5	64859225	64859225	+	Nonsense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PQLC3	130814	broad.mit.edu	37	2	11304356	11304356	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PRELID1	27166	broad.mit.edu	37	5	176733119	176733119	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RARA	5914	broad.mit.edu	37	17	38506145	38506145	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASSF6	166824	broad.mit.edu	37	4	74442420	74442420	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40428110	40428110	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RCAN1	1827	broad.mit.edu	37	21	35893901	35893901	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
S100A14	57402	broad.mit.edu	37	1	153587436	153587436	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SERPINB7	8710	broad.mit.edu	37	18	61463591	61463591	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMAD9	4093	broad.mit.edu	37	13	37453538	37453538	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107955403	107955403	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SPZ1	84654	broad.mit.edu	37	5	79616637	79616637	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182766972	182766972	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SSTR1	6751	broad.mit.edu	37	14	38678641	38678641	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TCF7	6932	broad.mit.edu	37	5	133451702	133451702	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122758390	122758390	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THYN1	29087	broad.mit.edu	37	11	134118717	134118717	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63000819	63000819	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98418894	98418894	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TMPRSS15	5651	broad.mit.edu	37	21	19666661	19666661	+	Silent	SNP	A	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TUBA4A	7277	broad.mit.edu	37	2	220116808	220116808	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TXNDC15	79770	broad.mit.edu	37	5	134232036	134232037	+	Missense_Mutation	DNP	GG	CA	CA	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	GG	GG	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
USP26	83844	broad.mit.edu	37	X	132161721	132161721	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM6	9204	broad.mit.edu	37	1	35480663	35480663	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF512B	57473	broad.mit.edu	37	20	62599261	62599261	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZYG11B	79699	broad.mit.edu	37	1	53245634	53245634	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A3-3346-01	TCGA-A3-3346-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
