Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
C3orf70	285382	hgsc.bcm.edu	37	3	184801259	184801259	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CARD10	29775	hgsc.bcm.edu	37	22	37893039	37893039	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CCNI	10983	hgsc.bcm.edu	37	4	77976393	77976393	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHAF1A	10036	hgsc.bcm.edu	37	19	4433326	4433326	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHAT	1103	hgsc.bcm.edu	37	10	50835688	50835688	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHM	1121	hgsc.bcm.edu	37	X	85236776	85236776	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CHN2	1124	hgsc.bcm.edu	37	7	29546872	29546872	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CREBBP	1387	hgsc.bcm.edu	37	16	3801795	3801795	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CREBBP	1387	hgsc.bcm.edu	37	16	3832701	3832701	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CSMD1	64478	hgsc.bcm.edu	37	8	2796248	2796248	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
CSMD3	114788	hgsc.bcm.edu	37	8	113392679	113392679	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DPY19L3	147991	hgsc.bcm.edu	37	19	32959705	32959705	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DSCAM	1826	hgsc.bcm.edu	37	21	41710140	41710140	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
DST	667	hgsc.bcm.edu	37	6	56506875	56506875	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
EIF2A	83939	hgsc.bcm.edu	37	3	150264607	150264607	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM24A	118670	hgsc.bcm.edu	37	10	124672398	124672398	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
FAM83H	286077	hgsc.bcm.edu	37	8	144810219	144810219	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GABRA6	2559	hgsc.bcm.edu	37	5	161119103	161119103	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GPC3	2719	hgsc.bcm.edu	37	X	132887592	132887592	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
GSR	2936	hgsc.bcm.edu	37	8	30537142	30537142	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HIPK1	204851	hgsc.bcm.edu	37	1	114508811	114508811	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
HSPA4L	22824	hgsc.bcm.edu	37	4	128751888	128751888	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
IL18RAP	8807	hgsc.bcm.edu	37	2	103061671	103061671	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
ITIH4	3700	hgsc.bcm.edu	37	3	52858939	52858939	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIAA0913	23053	hgsc.bcm.edu	37	10	75557650	75557650	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KIAA1919	91749	hgsc.bcm.edu	37	6	111587449	111587449	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
KLF8	11279	hgsc.bcm.edu	37	X	56295819	56295819	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MAGED1	9500	hgsc.bcm.edu	37	X	51638670	51638670	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MED24	9862	hgsc.bcm.edu	37	17	38182523	38182523	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
MTOR	2475	hgsc.bcm.edu	37	1	11177096	11177096	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NMT2	9397	hgsc.bcm.edu	37	10	15161468	15161468	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NPM1	4869	hgsc.bcm.edu	37	5	170837563	170837563	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
NRP2	8828	hgsc.bcm.edu	37	2	206641245	206641246	+	Frame_Shift_Del	INS	-	-	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR2AT4	341152	hgsc.bcm.edu	37	11	74800063	74800063	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
OR51B4	79339	hgsc.bcm.edu	37	11	5322438	5322438	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PAFAH1B1	5048	hgsc.bcm.edu	37	17	2570313	2570313	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
PGM5	5239	hgsc.bcm.edu	37	9	71080036	71080036	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
QRFPR	84109	hgsc.bcm.edu	37	4	122250674	122250674	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
RUNX1T1	862	hgsc.bcm.edu	37	8	93004057	93004057	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
SUN3	256979	hgsc.bcm.edu	37	7	48046774	48046774	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TAS1R2	80834	hgsc.bcm.edu	37	1	19166702	19166702	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TDG	6996	hgsc.bcm.edu	37	12	104379478	104379478	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TEX14	56155	hgsc.bcm.edu	37	17	56693620	56693620	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRIM21	6737	hgsc.bcm.edu	37	11	4411235	4411235	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRIM34	53840	hgsc.bcm.edu	37	11	5653739	5653739	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TRRAP	8295	hgsc.bcm.edu	37	7	98591251	98591251	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
TTN	7273	hgsc.bcm.edu	37	2	179414890	179414890	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VHL	7428	hgsc.bcm.edu	37	3	10188248	10188248	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
VLDLR	7436	hgsc.bcm.edu	37	9	2641485	2641485	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
WDR17	116966	hgsc.bcm.edu	37	4	177046399	177046399	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A3-3347-01	TCGA-A3-3347-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Capture	.	.	.	Illumina
