Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AKAP4	8852	genome.wustl.edu	37	X	49958365	49958365	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49958365	49958365	G	A	SNP	AKAP4	NM_003886	human	genbank	57_37b	-1	reviewed	silent	c.999	p.L333	0.470	HMMSmart_SM00807,HMMPfam_AKAP_110	HMMSmart_SM00807,HMMPfam_RII_binding_1,HMMPfam_AKAP_110	-	no_errors	
AKT1	207	genome.wustl.edu	37	14	105246551	105246551	+	Missense_Mutation	SNP	C	C	T	rs121434592	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C						Unknown	Unknown	Phase_IV	Capture			1	Illumina GAIIx	Illumina GAIIx	14	105246551	105246551	C	T	SNP	AKT1	NM_001014431	human	genbank	57_37b	-1	reviewed	missense	c.49	p.E17K	1.000	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	
ALDH3B1	221	genome.wustl.edu	37	11	67787235	67787235	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67787235	67787235	G	C	SNP	ALDH3B1	ENST00000007633	human	ensembl	57_37b	+1	known	missense	c.529	p.E177Q	0.997	superfamily_ALDH-like,HMMPfam_Aldedh	superfamily_ALDH-like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors	
ANUBL1	93550	genome.wustl.edu	37	10	46122005	46122005	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46122005	46122005	C	T	SNP	ANUBL1	NM_001128324	human	genbank	57_37b	-1	validated	silent	c.1266	p.V422	0.001	NULL	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin,HMMSmart_SM00154,HMMPfam_zf-AN1	-	no_errors	
ARHGAP21	57584	genome.wustl.edu	37	10	24874831	24874831	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	24874831	24874831	C	T	SNP	ARHGAP21	NM_020824	human	genbank	57_37b	-1	validated	missense	c.4387	p.E1463K	0.005	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARID4B	51742	genome.wustl.edu	37	1	235357486	235357486	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	235357486	235357486	G	C	SNP	ARID4B	NM_016374	human	genbank	57_37b	-1	reviewed	missense	c.1967	p.S656C	1.000	NULL	HMMSmart_SM00333,HMMPfam_RBB1NT,superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	-	no_errors	
ASPA	443	genome.wustl.edu	37	17	3392582	3392582	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	3392582	3392582	C	T	SNP	ASPA	NM_000049	human	genbank	57_37b	+1	reviewed	nonsense	c.580	p.Q194*	1.000	HMMPfam_AstE_AspA	HMMPfam_AstE_AspA	-	no_errors	
BCL11A	53335	genome.wustl.edu	37	2	60689483	60689483	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	60689483	60689483	G	A	SNP	BCL11A	NM_022893	human	genbank	57_37b	-1	reviewed	silent	c.564	p.H188	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
C10orf72	196740	genome.wustl.edu	37	10	50311891	50311891	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	50311891	50311891	G	C	SNP	C10orf72	NM_144984	human	genbank	57_37b	-1	validated	missense	c.472	p.P158A	0.042	NULL	superfamily_SSF48726,HMMSmart_IG	-	no_errors	
C12orf51	283450	genome.wustl.edu	37	12	112691858	112691858	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	112691858	112691858	C	G	SNP	C12orf51	NM_001109662	human	genbank	57_37b	-1	provisional	missense	c.2140	p.D714H	1.000	NULL	superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
C20orf7	79133	genome.wustl.edu	37	20	13797576	13797576	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	13797576	13797576	G	A	SNP	C20orf7	NM_024120	human	genbank	57_37b	+1	reviewed	missense	c.918	p.M306I	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11	-	no_errors	
CA12	771	genome.wustl.edu	37	15	63638802	63638802	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	63638802	63638802	G	A	SNP	CA12	NM_001218	human	genbank	57_37b	-1	reviewed	silent	c.213	p.L71	0.000	superfamily_Carbonic anhydrase,HMMPfam_Carb_anhydrase	superfamily_Carbonic anhydrase,HMMPfam_Carb_anhydrase,PatternScan_ALPHA_CA_1	-	no_errors	
CALD1	800	genome.wustl.edu	37	7	134625906	134625906	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	134625906	134625906	C	G	SNP	CALD1	NM_033138	human	genbank	57_37b	+1	reviewed	missense	c.1450	p.R484G	0.997	HMMPfam_Caldesmon	HMMPfam_Caldesmon,PatternScan_PHOSPHOPANTETHEINE	-	no_errors	
CARS2	79587	genome.wustl.edu	37	13	111294999	111294999	+	Missense_Mutation	SNP	C	C	T	rs59247777	byCluster;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	111294999	111294999	C	T	SNP	CARS2	ENST00000375781	human	ensembl	57_37b	-1	known	missense	c.143	p.R48K	0.016	NULL	NULL	-		
CASC5	57082	genome.wustl.edu	37	15	40917571	40917571	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	40917571	40917571	G	A	SNP	CASC5	NM_170589	human	genbank	57_37b	+1	validated	silent	c.5187	p.L1729	0.043	NULL	NULL	-	no_errors	
CCDC7	221016	genome.wustl.edu	37	10	32856783	32856783	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	32856783	32856783	A	G	SNP	CCDC7	NM_001026383	human	genbank	57_37b	+1	validated	silent	c.1383	p.G461	0.248	NULL	NULL	-	no_errors	
CD209	30835	genome.wustl.edu	37	19	7806864	7806864	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7806864	7806864	C	T	SNP	CD209	NR_026692	human	genbank	57_37b	-1	reviewed	rna	NULL	NULL	0.098	-	-	-	no_errors	
CGNL1	84952	genome.wustl.edu	37	15	57746010	57746010	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	57746010	57746010	G	A	SNP	CGNL1	NM_032866	human	genbank	57_37b	+1	validated	silent	c.2184	p.L728	1.000	NULL	HMMPfam_Myosin_tail_1	-	no_errors	
COL12A1	1303	genome.wustl.edu	37	6	75875459	75875459	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	75875459	75875459	A	T	SNP	COL12A1	NM_004370	human	genbank	57_37b	-1	reviewed	missense	c.2747	p.I916N	1.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen	-	no_errors	
CREB3L3	84699	genome.wustl.edu	37	19	4154928	4154928	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4154928	4154928	C	G	SNP	CREB3L3	NM_032607	human	genbank	57_37b	+1	provisional	missense	c.60	p.I20M	0.010	NULL	superfamily_A DNA-binding domain in eukaryotic transcription factors,HMMPfam_bZIP_1,HMMSmart_SM00338,PatternScan_BZIP_BASIC	-	no_errors	
CTH	1491	genome.wustl.edu	37	1	70890019	70890019	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70890019	70890019	G	T	SNP	CTH	NM_001902	human	genbank	57_37b	+1	reviewed	nonsense	c.508	p.E170*	0.795	superfamily_PLP-dependent transferases,HMMPfam_Cys_Met_Meta_PP	superfamily_PLP-dependent transferases,HMMPfam_Cys_Met_Meta_PP,PatternScan_CYS_MET_METAB_PP	-	no_errors	
DAK	26007	genome.wustl.edu	37	11	61106623	61106623	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	61106623	61106623	C	T	SNP	DAK	NM_015533	human	genbank	57_37b	+1	reviewed	silent	c.279	p.I93	0.996	superfamily_DAK1/DegV-like,HMMPfam_Dak1	superfamily_DAK1/DegV-like,HMMPfam_Dak1,superfamily_Citrobacter dihydroxyacetone kinase extra ATP-binding domain,HMMPfam_Dak2	-	no_errors	
DNAJC11	55735	genome.wustl.edu	37	1	6727814	6727814	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	6727814	6727814	C	G	SNP	DNAJC11	NM_018198	human	genbank	57_37b	-1	validated	missense	c.333	p.Q111H	1.000	NULL	superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ,PatternScan_DNAJ_1	-	no_errors	
DST	667	genome.wustl.edu	37	6	56485062	56485062	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56485062	56485062	T	C	SNP	DST	NM_001723	human	genbank	57_37b	-1	reviewed	missense	c.3770	p.K1257R	0.639	NULL	HMMSmart_SPEC,superfamily_Spectrin,HMMPfam_Spectrin,superfamily_SSF75399,HMMSmart_PLEC,HMMPfam_Plectin	-	no_errors	
DUXA	503835	genome.wustl.edu	37	19	57672085	57672085	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57672085	57672085	G	C	SNP	DUXA	NM_001012729	human	genbank	57_37b	-1	validated	missense	c.106	p.Q36E	0.007	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	PatternScan_HOMEOBOX_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	no_errors	
EIF4ENIF1	56478	genome.wustl.edu	37	22	31839047	31839047	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	31839047	31839047	G	A	SNP	EIF4ENIF1	NM_019843	human	genbank	57_37b	-1	reviewed	missense	c.2107	p.R703C	1.000	HMMPfam_EIF4E-T	HMMPfam_EIF4E-T	-	no_errors	
ENSG00000226997	0	genome.wustl.edu	37	12	57390859	57390860	+	Frame_Shift_Del	DEL	AC	AC	-	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	AC	AC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57390859	57390860	AC	-	DEL	ENSG00000226997	ENST00000447269	human	ensembl	57_37b	+1	known	frame_shift_del	c.115_116	p.Q40fs	0.309:0.017	NULL	NULL	(deletion:cds_exon[57390745,57391335])	no_errors	
ENSG00000228565	0	genome.wustl.edu	37	6	9616231	9616231	+	Silent	SNP	A	A	G	rs75062080	byCluster;byFrequency;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	9616231	9616231	A	G	SNP	ENSG00000228565	ENST00000455975	human	ensembl	57_37b	+1	known	silent	c.21	p.E7	0.002	NULL	NULL	-		
ENSG00000238767	0	genome.wustl.edu	37	15	59682486	59682487	+	RNA	INS	-	-	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	59682486	59682487	-	T	INS	ENSG00000238767	ENST00000458787	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.180:0.156	-	-	-	no_errors	
ENSG00000245818	0	genome.wustl.edu	37	6	53200299	53200299	+	RNA	SNP	C	C	G	rs2397142	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	53200299	53200299	C	G	SNP	ENSG00000245818	ENST00000498953	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.001	-	-	-		
FAM188A	80013	genome.wustl.edu	37	10	15828635	15828635	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	15828635	15828635	C	T	SNP	FAM188A	NM_024948	human	genbank	57_37b	-1	validated	missense	c.1041	p.M347I	1.000	superfamily_EF-hand	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_EF-hand	-	no_errors	
FBXL19	54620	genome.wustl.edu	37	16	30941589	30941589	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	30941589	30941589	G	A	SNP	FBXL19	NM_001099784	human	genbank	57_37b	+1	provisional	missense	c.1045	p.E349K	0.982	NULL	HMMPfam_zf-CXXC,HMMSmart_SM00249,PatternScan_ZF_PHD_1,HMMSmart_SM00256,HMMPfam_F-box,superfamily_RNI-like,HMMSmart_SM00367	-	no_errors	
FCGBP	8857	genome.wustl.edu	37	19	40424194	40424194	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40424194	40424194	C	T	SNP	FCGBP	NM_003890	human	genbank	57_37b	-1	validated	missense	c.2009	p.G670D	0.000	HMMPfam_C8	HMMSmart_VWC,HMMPfam_VWD,HMMSmart_VWD,superfamily_Cysrich_TIL,HMMPfam_TIL_assoc,HMMSmart_FOLN,HMMPfam_C8,HMMPfam_TIL	-	no_errors	
FCRL4	83417	genome.wustl.edu	37	1	157557674	157557674	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	157557674	157557674	G	A	SNP	FCRL4	NM_031282	human	genbank	57_37b	-1	reviewed	silent	c.543	p.F181	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
GLT1D1	144423	genome.wustl.edu	37	12	129383811	129383811	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	129383811	129383811	G	A	SNP	GLT1D1	NM_144669	human	genbank	57_37b	+1	provisional	silent	c.354	p.K118	1.000	NULL	superfamily_SSF53756,HMMPfam_Glycos_transf_1	-	no_errors	
GPBP1L1	60313	genome.wustl.edu	37	1	46108107	46108107	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	46108107	46108107	C	G	SNP	GPBP1L1	NM_021639	human	genbank	57_37b	-1	validated	missense	c.542	p.G181A	1.000	NULL	NULL	-	no_errors	
GPD1	2819	genome.wustl.edu	37	12	50503243	50503243	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	50503243	50503243	G	A	SNP	GPD1	NM_005276	human	genbank	57_37b	+1	provisional	missense	c.991	p.E331K	0.997	HMMPfam_NAD_Gly3P_dh_C,superfamily_6DGDH_C_like	superfamily_NAD(P)-bd,HMMPfam_NAD_Gly3P_dh_N,HMMPfam_NAD_Gly3P_dh_C,superfamily_6DGDH_C_like,PatternScan_NAD_G3PDH	-	no_errors	
GPR1	2825	genome.wustl.edu	37	2	207041528	207041528	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207041528	207041528	A	T	SNP	GPR1	NM_001098199	human	genbank	57_37b	-1	validated	missense	c.444	p.H148Q	0.931	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors	
GTF2F1	2962	genome.wustl.edu	37	19	6380409	6380409	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	6380409	6380409	G	C	SNP	GTF2F1	NM_002096	human	genbank	57_37b	-1	validated	silent	c.1437	p.T479	1.000	"HMMPfam_TFIIF_alpha,superfamily_""Winged helix"" DNA-binding domain"	"HMMPfam_TFIIF_alpha,superfamily_Rap30/74 interaction domains,superfamily_""Winged helix"" DNA-binding domain"	-	no_errors	
HSPG2	3339	genome.wustl.edu	37	1	22199245	22199245	+	Missense_Mutation	SNP	C	C	T	rs2229482	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	22199245	22199245	C	T	SNP	HSPG2	NM_005529	human	genbank	57_37b	-1	reviewed	missense	c.3835	p.G1279R	1.000	NULL	PatternScan_COPPER_BLUE	-		
IGHV3-6	0	genome.wustl.edu	37	14	106829998	106829998	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	106829998	106829998	G	C	SNP	IGHV3-6	ENST00000454292	human	ensembl	57_37b	-1	known	silent	c.48	p.L16	0.095	NULL	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors	
IPMK	253430	genome.wustl.edu	37	10	59997544	59997544	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	59997544	59997544	C	G	SNP	IPMK	NM_152230	human	genbank	57_37b	-1	provisional	missense	c.222	p.L74F	1.000	superfamily_SSF56104,HMMPfam_IPK	superfamily_SSF56104,HMMPfam_IPK	-	no_errors	
JAK1	3716	genome.wustl.edu	37	1	65313316	65313316	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	65313316	65313316	C	A	SNP	JAK1	NM_002227	human	genbank	57_37b	-1	reviewed	missense	c.1798	p.G600W	1.000	superfamily_SSF55550,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc	PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550,HMMSmart_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
KAL1	3730	genome.wustl.edu	37	X	8553429	8553429	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	8553429	8553429	G	A	SNP	KAL1	NM_000216	human	genbank	57_37b	-1	reviewed	silent	c.735	p.D245	0.873	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	superfamily_WAP,HMMPfam_WAP,HMMSmart_WAP,PatternScan_4_DISULFIDE_CORE,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors	
KCNU1	0	genome.wustl.edu	37	8	36780034	36780034	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	36780034	36780034	G	A	SNP	KCNU1	NM_001031836	human	genbank	57_37b	+1	validated	missense	c.2623	p.E875K	0.996	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_NAD(P)-bd,HMMPfam_BK_channel_a	-	no_errors	
KDR	3791	genome.wustl.edu	37	4	55953837	55953837	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	55953837	55953837	G	T	SNP	KDR	NM_002253	human	genbank	57_37b	-1	reviewed	missense	c.3599	p.S1200Y	1.000	NULL	superfamily_SSF48726,HMMSmart_IG,HMMPfam_V-set,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_ig,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
KIAA0913	23053	genome.wustl.edu	37	10	75549754	75549754	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75549754	75549754	C	G	SNP	KIAA0913	NM_015037	human	genbank	57_37b	+1	validated	missense	c.779	p.S260C	1.000	NULL	HMMPfam_SWIM	-	no_errors	
KIAA1432	57589	genome.wustl.edu	37	9	5763849	5763849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	5763849	5763849	C	T	SNP	KIAA1432	NM_020829	human	genbank	57_37b	+1	validated	missense	c.2585	p.S862F	1.000	HMMPfam_RIC1	superfamily_Amine_DH_B_like,HMMPfam_RIC1	-	no_errors	
KIF26B	55083	genome.wustl.edu	37	1	245530320	245530320	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	245530320	245530320	C	T	SNP	KIF26B	NM_018012	human	genbank	57_37b	+1	provisional	missense	c.650	p.S217L	0.993	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin	-	no_errors	
KIF4B	285643	genome.wustl.edu	37	5	154395982	154395982	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	154395982	154395982	G	A	SNP	KIF4B	NM_001099293	human	genbank	57_37b	+1	provisional	missense	c.2563	p.E855K	1.000	NULL	HMMSmart_KISc,superfamily_SSF52540,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KIT	3815	genome.wustl.edu	37	4	55561727	55561727	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	55561727	55561727	C	G	SNP	KIT	NM_000222	human	genbank	57_37b	+1	reviewed	missense	c.117	p.I39M	0.988	superfamily_SSF48726	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMSmart_IG,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
KLB	152831	genome.wustl.edu	37	4	39448147	39448147	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	39448147	39448147	C	T	SNP	KLB	NM_175737	human	genbank	57_37b	+1	validated	silent	c.1801	p.L601	1.000	superfamily_Glyco_hydro_cat,HMMPfam_Glyco_hydro_1	PatternScan_GLYCOSYL_HYDROL_F1_1,PatternScan_GLYCOSYL_HYDROL_F1_2,HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat	-	no_errors	
KRT35	3886	genome.wustl.edu	37	17	39637326	39637326	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39637326	39637326	G	T	SNP	KRT35	NM_002280	human	genbank	57_37b	-1	reviewed	silent	c.24	p.A8	0.002	NULL	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors	
LCA5L	150082	genome.wustl.edu	37	21	40792688	40792688	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	40792688	40792688	G	C	SNP	LCA5L	NM_152505	human	genbank	57_37b	-1	validated	missense	c.919	p.Q307E	0.006	NULL	NULL	-	no_errors	
LIMA1	51474	genome.wustl.edu	37	12	50598427	50598427	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	50598427	50598427	C	G	SNP	LIMA1	NM_001113546	human	genbank	57_37b	-1	validated	missense	c.772	p.E258Q	1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors	
LIN54	132660	genome.wustl.edu	37	4	83905831	83905831	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	83905831	83905831	G	C	SNP	LIN54	NM_194282	human	genbank	57_37b	-1	validated	missense	c.167	p.S56C	0.994	NULL	HMMPfam_CXC	-	no_errors	
LMAN1L	79748	genome.wustl.edu	37	15	75116744	75116744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75116744	75116744	C	T	SNP	LMAN1L	NM_021819	human	genbank	57_37b	+1	validated	missense	c.1376	p.S459L	0.002	NULL	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Lectin_leg-like	-	no_errors	
LOC100129534	0	genome.wustl.edu	37	1	2283313	2283313	+	RNA	SNP	C	C	G	rs2843130	byCluster;byFrequency;bySubmitter;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	2283313	2283313	C	G	SNP	LOC100129534	NR_024489	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.000	-	-	-		
LOC100288975	0	genome.wustl.edu	37	10	91599043	91599043	+	RNA	SNP	C	C	T	rs3802651	byCluster;byFrequency;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	91599043	91599043	C	T	SNP	LOC100288975	XR_078428	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.217	-	-	-		
LOC100289525	0	genome.wustl.edu	37	6	33180205	33180205	+	Silent	SNP	G	G	A	rs116123477	byCluster;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	33180205	33180205	G	A	SNP	LOC100289525	XM_002342641	human	genbank	57_37b	-1	model	silent	c.6	p.V2	0.437	NULL	NULL	-		
LOC100292052	0	genome.wustl.edu	37	19	7761812	7761812	+	Silent	SNP	A	A	G	rs2277989	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7761812	7761812	A	G	SNP	LOC100292052	XM_002345158	human	genbank	57_37b	+1	model	silent	c.2823	p.S941	0.001	NULL	PatternScan_ABC_TRANSPORTER_1	-		
LOC388692	388692	genome.wustl.edu	37	1	149285874	149285874	+	RNA	SNP	C	C	T	rs6687319	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	149285874	149285874	C	T	SNP	LOC388692	NR_027002	human	genbank	57_37b	+1	predicted	rna	NULL	NULL	0.000	-	-	-		
LTBP1	4052	genome.wustl.edu	37	2	33590449	33590449	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	33590449	33590449	G	C	SNP	LTBP1	NM_206943	human	genbank	57_37b	+1	reviewed	silent	c.4593	p.L1531	1.000	superfamily_TB module/8-cys domain	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors	
MAGEB1	4112	genome.wustl.edu	37	X	30269534	30269534	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	30269534	30269534	G	A	SNP	MAGEB1	NM_002363	human	genbank	57_37b	+1	reviewed	silent	c.924	p.L308	0.002	NULL	HMMPfam_MAGE	-	no_errors	
MDN1	23195	genome.wustl.edu	37	6	90385248	90385248	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90385248	90385248	C	A	SNP	MDN1	NM_014611	human	genbank	57_37b	-1	provisional	missense	c.12696	p.L4232F	0.995	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_vWA-like,HMMSmart_SM00327	-	no_errors	
MDN1	23195	genome.wustl.edu	37	6	90400449	90400449	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90400449	90400449	C	T	SNP	MDN1	NM_014611	human	genbank	57_37b	-1	provisional	silent	c.10692	p.L3564	1.000	NULL	HMMSmart_SM00327,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_vWA-like	-	no_errors	
METTL2B	55798	genome.wustl.edu	37	7	128133877	128133877	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	128133877	128133877	C	G	SNP	METTL2B	NM_018396	human	genbank	57_37b	+1	reviewed	missense	c.689	p.P230R	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors	
MR1	3140	genome.wustl.edu	37	1	181024397	181024397	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	181024397	181024397	G	A	SNP	MR1	NM_001531	human	genbank	57_37b	+1	provisional	missense	c.1022	p.R341Q	0.000	NULL	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin,HMMSmart_SM00407,HMMPfam_C1-set,PatternScan_IG_MHC	-	no_errors	
MYB	4602	genome.wustl.edu	37	6	135515566	135515566	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	135515566	135515566	G	A	SNP	MYB	NM_001130173	human	genbank	57_37b	+1	reviewed	missense	c.916	p.E306K	1.000	HMMPfam_Wos2	HMMSmart_SM00717,HMMPfam_Myb_DNA-binding,superfamily_Homeodomain-like,HMMPfam_Wos2,HMMPfam_Cmyb_C	-	no_errors	
N4BP1	9683	genome.wustl.edu	37	16	48576901	48576901	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	48576901	48576901	C	G	SNP	N4BP1	NM_153029	human	genbank	57_37b	-1	validated	missense	c.2605	p.E869Q	0.983	NULL	NULL	-	no_errors	
NBPF7	343505	genome.wustl.edu	37	1	120384173	120384173	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	120384173	120384173	C	G	SNP	NBPF7	NM_001047980	human	genbank	57_37b	-1	predicted	missense	c.389	p.R130T	0.011	NULL	HMMPfam_DUF1220	-	no_errors	
NCL	4691	genome.wustl.edu	37	2	232326353	232326353	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	232326353	232326353	C	T	SNP	NCL	NM_005381	human	genbank	57_37b	-1	reviewed	missense	c.511	p.E171K	0.472	HMMPfam_FYDLN_acid	HMMPfam_FYDLN_acid,superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors	
NOV	4856	genome.wustl.edu	37	8	120431514	120431514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	120431514	120431514	G	A	SNP	NOV	NM_002514	human	genbank	57_37b	+1	reviewed	missense	c.706	p.E236K	1.000	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1	HMMSmart_IB,HMMPfam_IGFBP,PatternScan_IGFBP_N_1,HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_Cys_knot,HMMSmart_CT,PatternScan_CTCK_1	-	no_errors	
OR52N2	390077	genome.wustl.edu	37	11	5841832	5841832	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5841832	5841832	C	T	SNP	OR52N2	NM_001005174	human	genbank	57_37b	+1	provisional	silent	c.267	p.F89	0.166	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OSBP	5007	genome.wustl.edu	37	11	59367985	59367985	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59367985	59367985	G	C	SNP	OSBP	NM_002556	human	genbank	57_37b	-1	reviewed	missense	c.1295	p.S432C	1.000	HMMPfam_Oxysterol_BP	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_Oxysterol_BP,PatternScan_OSBP	-	no_errors	
OTOP2	92736	genome.wustl.edu	37	17	72929469	72929469	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72929469	72929469	G	A	SNP	OTOP2	NM_178160	human	genbank	57_37b	+1	provisional	splice_site	c.1519-1	e6-1	1.000	-	-	-	no_errors	
PER2	8864	genome.wustl.edu	37	2	239164479	239164479	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	239164479	239164479	G	A	SNP	PER2	NM_022817	human	genbank	57_37b	-1	reviewed	silent	c.2139	p.L713	0.002	NULL	HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS_3	-	no_errors	
PHF3	23469	genome.wustl.edu	37	6	64423044	64423044	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	64423044	64423044	C	T	SNP	PHF3	NM_015153	human	genbank	57_37b	+1	provisional	missense	c.5560	p.P1854S	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,HMMPfam_SPOC	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	T			TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	T	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047L	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178938934	178938934	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178938934	178938934	G	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.2176	p.E726K	1.000	superfamily_Kinase_like	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PKHD1L1	93035	genome.wustl.edu	37	8	110457083	110457083	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	110457083	110457083	A	G	SNP	PKHD1L1	NM_177531	human	genbank	57_37b	+1	validated	missense	c.4985	p.D1662G	0.938	HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00758,superfamily_Anthrax protective antigen,HMMSmart_SM00710,superfamily_Cupredoxins,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors	
PNLIPRP1	5407	genome.wustl.edu	37	10	118352049	118352049	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	118352049	118352049	G	A	SNP	PNLIPRP1	NM_006229	human	genbank	57_37b	+1	provisional	missense	c.326	p.C109Y	1.000	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases,PatternScan_LIPASE_SER,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,HMMSmart_SM00308	-	no_errors	
PPL	5493	genome.wustl.edu	37	16	4954017	4954017	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4954017	4954017	G	T	SNP	PPL	NM_002705	human	genbank	57_37b	-1	reviewed	silent	c.187	p.R63	0.998	NULL	HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_Plakin repeat,HMMSmart_SM00250,HMMPfam_Plectin	-	no_errors	
PRKCB	5579	genome.wustl.edu	37	16	24043543	24043543	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	24043543	24043543	C	T	SNP	PRKCB	NM_002738	human	genbank	57_37b	+1	reviewed	silent	c.375	p.L125	1.000	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	no_errors	
PRMT6	55170	genome.wustl.edu	37	1	107599767	107599767	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	107599767	107599767	G	C	SNP	PRMT6	NM_018137	human	genbank	57_37b	+1	validated	missense	c.253	p.E85Q	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11	-	no_errors	
PRPF8	10594	genome.wustl.edu	37	17	1580966	1580966	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	1580966	1580966	C	A	SNP	PRPF8	NM_006445	human	genbank	57_37b	-1	reviewed	missense	c.1877	p.G626V	1.000	HMMPfam_PROCN	HMMPfam_PRO8NT,HMMPfam_PROCN,HMMPfam_RRM_4,HMMPfam_U5_2-snRNA_bdg,HMMPfam_U6-snRNA_bdg,HMMPfam_Mov34,HMMSmart_SM00232,HMMPfam_PROCT	-	no_errors	
RB1	5925	genome.wustl.edu	37	13	49050906	49050906	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	49050906	49050906	G	T	SNP	RB1	NM_000321	human	genbank	57_37b	+1	reviewed	nonsense	c.2590	p.E864*	1.000	HMMPfam_Rb_C	HMMPfam_RB_A,superfamily_Cyclin-like,HMMPfam_RB_B,HMMSmart_SM00385,HMMPfam_Rb_C	-	no_errors	
RBM14	10432	genome.wustl.edu	37	11	66391892	66391892	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66391892	66391892	C	G	SNP	RBM14	NM_006328	human	genbank	57_37b	+1	validated	missense	c.545	p.S182C	1.000	NULL	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1	-	no_errors	
RBM14	10432	genome.wustl.edu	37	11	66392021	66392021	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66392021	66392021	C	G	SNP	RBM14	NM_006328	human	genbank	57_37b	+1	validated	missense	c.674	p.S225C	1.000	NULL	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD	-	no_errors	
RNF213	57674	genome.wustl.edu	37	17	78321847	78321847	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78321847	78321847	G	A	SNP	RNF213	ENST00000336301	human	ensembl	57_37b	+1	known	missense	c.3931	p.G1311S	0.002	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors	
ROS1	6098	genome.wustl.edu	37	6	117709171	117709171	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	117709171	117709171	C	T	SNP	ROS1	NM_002944	human	genbank	57_37b	-1	reviewed	missense	c.1786	p.E596K	0.608	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like,superfamily_SSF63825,HMMSmart_LY,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors	
RPH3AL	9501	genome.wustl.edu	37	17	96983	96983	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	96983	96983	G	A	SNP	RPH3AL	NM_006987	human	genbank	57_37b	-1	provisional	nonsense	c.532	p.R178*	0.985	HMMPfam_RPH3A_effector	HMMPfam_RPH3A_effector,superfamily_FYVE/PHD zinc finger	-	no_errors	
S100A1	6271	genome.wustl.edu	37	1	153603056	153603056	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	153603056	153603056	C	T	SNP	S100A1	NM_006271	human	genbank	57_37b	+1	reviewed	missense	c.59	p.S20L	1.000	superfamily_EF-hand,HMMPfam_S_100	superfamily_EF-hand,HMMPfam_S_100,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_S100_CABP,PatternScan_EF_HAND_1	-	no_errors	
SACS	26278	genome.wustl.edu	37	13	23911264	23911264	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	23911264	23911264	G	C	SNP	SACS	NM_014363	human	genbank	57_37b	-1	reviewed	missense	c.6751	p.Q2251E	1.000	NULL	superfamily_Ubiquitin-like,HMMPfam_ubiquitin,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,superfamily_Chaperone J-domain,HMMPfam_HEPN,superfamily_Nucleotidyltransferase substrate binding subunit/domain,HMMSmart_SM00748	-	no_errors	
SCN9A	6335	genome.wustl.edu	37	2	167138306	167138306	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	167138306	167138306	G	C	SNP	SCN9A	NM_002977	human	genbank	57_37b	-1	reviewed	missense	c.1954	p.Q652E	0.994	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
SEC24B	10427	genome.wustl.edu	37	4	110460811	110460811	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	110460811	110460811	C	T	SNP	SEC24B	NM_006323	human	genbank	57_37b	+1	reviewed	nonsense	c.3787	p.Q1263*	1.000	superfamily_C-terminal gelsolin-like domain of Sec23/24	PatternScan_MIP,superfamily_beta-sandwich domain of Sec23/24,superfamily_Zn-finger domain of Sec23/24,HMMPfam_zf-Sec23_Sec24,HMMPfam_Sec23_trunk,superfamily_vWA-like,HMMPfam_Sec23_BS,superfamily_Helical domain of Sec23/24,HMMPfam_Sec23_helical,superfamily_C-terminal gelsolin-like domain of Sec23/24,HMMPfam_Gelsolin	-	no_errors	
SETX	23064	genome.wustl.edu	37	9	135211682	135211682	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	135211682	135211682	C	A	SNP	SETX	NM_015046	human	genbank	57_37b	-1	reviewed	splice_site	c.718+1	e4+1	1.000	-	-	-	no_errors	
SFMBT1	51460	genome.wustl.edu	37	3	52947576	52947576	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	52947576	52947576	G	T	SNP	SFMBT1	NM_001005158	human	genbank	57_37b	-1	reviewed	nonsense	c.1538	p.S513*	1.000	NULL	superfamily_Tudor/PWWP/MBT,HMMSmart_SM00561,HMMPfam_MBT,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
SIRPG	55423	genome.wustl.edu	37	20	1617134	1617134	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1617134	1617134	C	T	SNP	SIRPG	NM_018556	human	genbank	57_37b	-1	reviewed	missense	c.448	p.V150M	0.000	superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C1-set,HMMSmart_SM00407	-	no_errors	
SIRT3	23410	genome.wustl.edu	37	11	223832	223832	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	223832	223832	C	A	SNP	SIRT3	ENST00000324945	human	ensembl	57_37b	-1	known	missense	c.327	p.R109S	0.000	NULL	HMMPfam_SIR2,superfamily_SSF52467	-	no_errors	
SLC2A4	6517	genome.wustl.edu	37	17	7186564	7186564	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7186564	7186564	G	C	SNP	SLC2A4	NM_001042	human	genbank	57_37b	+1	reviewed	missense	c.34	p.D12H	1.000	superfamily_MFS_gen_substrate_transporter	superfamily_MFS_gen_substrate_transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2,PatternScan_SUGAR_TRANSPORT_1	-	no_errors	
SLC34A1	6569	genome.wustl.edu	37	5	176821143	176821143	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176821143	176821143	A	C	SNP	SLC34A1	NM_003052	human	genbank	57_37b	+1	reviewed	missense	c.1121	p.N374T	1.000	HMMPfam_Na_Pi_cotrans	HMMPfam_Na_Pi_cotrans	-	no_errors	
SLCO1A2	6579	genome.wustl.edu	37	12	21453307	21453307	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	21453307	21453307	C	T	SNP	SLCO1A2	NM_021094	human	genbank	57_37b	-1	reviewed	silent	c.885	p.K295	0.013	superfamily_MFS general substrate transporter,HMMPfam_OATP	superfamily_MFS general substrate transporter,HMMPfam_OATP,superfamily_Kazal-type serine protease inhibitors,HMMPfam_Kazal_2	-	no_errors	
SNTG1	54212	genome.wustl.edu	37	8	51569549	51569549	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	51569549	51569549	G	A	SNP	SNTG1	NM_018967	human	genbank	57_37b	+1	reviewed	silent	c.930	p.L310	0.743	HMMSmart_SM00233,superfamily_PH domain-like	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors	
SRRT	51593	genome.wustl.edu	37	7	100485916	100485916	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100485916	100485916	C	T	SNP	SRRT	NM_015908	human	genbank	57_37b	+1	validated	missense	c.2467	p.P823S	0.999	HMMPfam_ARS2	HMMPfam_ARS2	-	no_errors	
SYNE1	23345	genome.wustl.edu	37	6	152453309	152453309	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	152453309	152453309	G	C	SNP	SYNE1	NM_182961	human	genbank	57_37b	-1	reviewed	nonsense	c.26042	p.S8681*	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors	
SYNE1	23345	genome.wustl.edu	37	6	152454417	152454417	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	152454417	152454417	A	G	SNP	SYNE1	NM_182961	human	genbank	57_37b	-1	reviewed	silent	c.25995	p.S8665	1.000	NULL	PatternScan_ACTININ_1,PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_Spectrin,HMMPfam_KASH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00150,superfamily_Spectrin repeat	-	no_errors	
TBC1D22B	55633	genome.wustl.edu	37	6	37280745	37280745	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	37280745	37280745	G	A	SNP	TBC1D22B	NM_017772	human	genbank	57_37b	+1	validated	missense	c.1034	p.R345Q	1.000	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors	
TIFA	92610	genome.wustl.edu	37	4	113199522	113199522	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	113199522	113199522	C	G	SNP	TIFA	NM_052864	human	genbank	57_37b	-1	validated	missense	c.51	p.Q17H	0.849	NULL	HMMSmart_FHA,HMMPfam_FHA	-	no_errors	
TIGD6	81789	genome.wustl.edu	37	5	149375540	149375540	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	149375540	149375540	C	T	SNP	TIGD6	NM_030953	human	genbank	57_37b	-1	validated	silent	c.372	p.L124	0.984	superfamily_Homeodomain_like,HMMPfam_CenpB-DNA-bind,HMMSmart_CENPB	HMMPfam_CENP-B_N,superfamily_Homeodomain_like,HMMPfam_CenpB-DNA-bind,HMMSmart_CENPB,HMMPfam_DDE	-	no_errors	
TJP3	27134	genome.wustl.edu	37	19	3734343	3734343	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	3734343	3734343	C	T	SNP	TJP3	NM_014428	human	genbank	57_37b	+1	provisional	missense	c.995	p.S332L	0.429	NULL	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like,HMMSmart_SM00072,HMMPfam_SH3_2,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
TMEM50B	757	genome.wustl.edu	37	21	34832793	34832793	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	34832793	34832793	G	A	SNP	TMEM50B	ENST00000441128	human	ensembl	57_37b	-1	known	missense	c.119	p.S40L	1.000	NULL	HMMPfam_UPF0220	-	no_errors	
TMPRSS9	360200	genome.wustl.edu	37	19	2413961	2413961	+	Silent	SNP	G	C	C	rs10153475	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	2413961	2413961	G	C	SNP	TMPRSS9	NM_182973	human	genbank	57_37b	+1	provisional	silent	c.1416	p.S472	0.011	NULL	HMMPfam_Ldl_recept_a,superfamily_LDL receptor-like module,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-		
TNKS1BP1	85456	genome.wustl.edu	37	11	57088085	57088085	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	57088085	57088085	G	A	SNP	TNKS1BP1	NM_033396	human	genbank	57_37b	-1	validated	missense	c.196	p.R66W	0.952	NULL	NULL	-	no_errors	
TP53BP1	7158	genome.wustl.edu	37	15	43724569	43724569	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43724569	43724569	C	G	SNP	TP53BP1	NM_001141980	human	genbank	57_37b	-1	validated	missense	c.3498	p.L1166F	0.000	NULL	HMMPfam_53-BP1_Tudor,superfamily_SSF63748,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_BRCT	-	no_errors	
TP73	7161	genome.wustl.edu	37	1	3624237	3624237	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	3624237	3624237	C	T	SNP	TP73	NM_005427	human	genbank	57_37b	+1	reviewed	missense	c.311	p.S104F	1.000	NULL	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain,HMMSmart_SM00454,HMMPfam_SAM_2,superfamily_SAM/Pointed domain	-	no_errors	
TRNAU1AP	54952	genome.wustl.edu	37	1	28880170	28880170	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	28880170	28880170	G	T	SNP	TRNAU1AP	NM_017846	human	genbank	57_37b	+1	validated	nonsense	c.46	p.E16*	1.000	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1	HMMSmart_SM00360,superfamily_RNA-binding domain RBD,HMMPfam_RRM_1	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179467114	179467114	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179467114	179467114	G	C	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.47311	p.L15771V	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
UBASH3A	53347	genome.wustl.edu	37	21	43862566	43862566	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	43862566	43862566	C	G	SNP	UBASH3A	NM_018961	human	genbank	57_37b	+1	validated	silent	c.1491	p.L497	1.000	superfamily_Phosphoglycerate mutase-like,HMMPfam_PGAM	superfamily_UBA-like,HMMPfam_UBA,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_Phosphoglycerate mutase-like,HMMPfam_PGAM	-	no_errors	
UBR4	23352	genome.wustl.edu	37	1	19430614	19430614	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	19430614	19430614	C	T	SNP	UBR4	NM_020765	human	genbank	57_37b	-1	validated	missense	c.12865	p.D4289N	1.000	superfamily_ARM repeat	superfamily_ARM repeat,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-UBR,HMMSmart_SM00396,PatternScan_ASP_GLU_RACEMASE_1	-	no_errors	
VCP	7415	genome.wustl.edu	37	9	35065250	35065250	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35065250	35065250	C	G	SNP	VCP	NM_007126	human	genbank	57_37b	-1	reviewed	missense	c.574	p.E192Q	1.000	superfamily_Cdc48 domain 2-like	superfamily_ADC-like,HMMPfam_CDC48_N,superfamily_Cdc48 domain 2-like,HMMPfam_CDC48_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
WDFY2	115825	genome.wustl.edu	37	13	52329500	52329500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	52329500	52329500	G	A	SNP	WDFY2	NM_052950	human	genbank	57_37b	+1	reviewed	missense	c.838	p.E280K	1.000	superfamily_WD40 repeat-like,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	-	no_errors	
WDR3	10885	genome.wustl.edu	37	1	118495209	118495209	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	118495209	118495209	C	T	SNP	WDR3	NM_006784	human	genbank	57_37b	+1	reviewed	missense	c.2075	p.S692L	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMPfam_Utp12	-	no_errors	
WNK3	65267	genome.wustl.edu	37	X	54263737	54263737	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54263737	54263737	G	C	SNP	WNK3	NM_020922	human	genbank	57_37b	-1	validated	missense	c.4262	p.S1421C	0.919	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
ZNF266	10781	genome.wustl.edu	37	19	9524014	9524014	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9524014	9524014	G	A	SNP	ZNF266	NM_006631	human	genbank	57_37b	-1	validated	silent	c.1587	p.F529	0.099	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF266	10781	genome.wustl.edu	37	19	9524258	9524258	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9524258	9524258	G	T	SNP	ZNF266	NM_006631	human	genbank	57_37b	-1	validated	missense	c.1343	p.S448Y	0.000	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	HMMSmart_KRAB,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667	-	no_errors	
ZNF324	25799	genome.wustl.edu	37	19	58982714	58982714	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58982714	58982714	C	T	SNP	ZNF324	NM_014347	human	genbank	57_37b	+1	provisional	silent	c.855	p.Y285	0.002	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	HMMPfam_KRAB,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF43	7594	genome.wustl.edu	37	19	21990459	21990459	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	21990459	21990459	C	G	SNP	ZNF43	NM_003423	human	genbank	57_37b	-1	validated	missense	c.2380	p.D794H	0.015	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF443	10224	genome.wustl.edu	37	19	12541839	12541839	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12541839	12541839	G	C	SNP	ZNF443	NM_005815	human	genbank	57_37b	-1	validated	missense	c.1147	p.H383D	0.374	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF616	90317	genome.wustl.edu	37	19	52619379	52619379	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52619379	52619379	G	C	SNP	ZNF616	NM_178523	human	genbank	57_37b	-1	validated	missense	c.1038	p.I346M	0.001	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNHIT6	54680	genome.wustl.edu	37	1	86123612	86123612	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A095-01	TCGA-A8-A095-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	86123612	86123612	C	T	SNP	ZNHIT6	NM_017953	human	genbank	57_37b	-1	validated	silent	c.1290	p.L430	1.000	NULL	HMMPfam_zf-HIT	-	no_errors	
