Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADAMTS17	170691	genome.wustl.edu	37	15	100537592	100537592	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	100537592	100537592	G	A	SNP	ADAMTS17	NM_139057	human	genbank	57_37b	-1	reviewed	nonsense	c.2794	p.Q932*	1.000	superfamily_TSP-1 type 1 repeat,HMMPfam_TSP_1,HMMSmart_SM00209	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_PLAC"	-	no_errors	
AFF2	2334	genome.wustl.edu	37	X	148037437	148037437	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	148037437	148037437	T	C	SNP	AFF2	NM_002025	human	genbank	57_37b	+1	reviewed	missense	c.1862	p.V621A	0.009	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors	
ALKBH5	54890	genome.wustl.edu	37	17	18110148	18110148	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	18110148	18110148	C	T	SNP	ALKBH5	NM_017758	human	genbank	57_37b	+1	validated	missense	c.871	p.R291W	1.000	NULL	NULL	-	no_errors	
ARHGAP20	57569	genome.wustl.edu	37	11	110451528	110451528	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	110451528	110451528	C	A	SNP	ARHGAP20	NM_020809	human	genbank	57_37b	-1	validated	missense	c.2142	p.K714N	0.369	NULL	superfamily_PH domain-like,HMMSmart_SM00233,HMMPfam_RA,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
C1GALT1C1	29071	genome.wustl.edu	37	X	119760251	119760251	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	119760251	119760251	C	A	SNP	C1GALT1C1	NM_001011551	human	genbank	57_37b	-1	reviewed	missense	c.771	p.E257D	0.998	NULL	NULL	-	no_errors	
C4orf14	84273	genome.wustl.edu	37	4	57842745	57842745	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	57842745	57842745	C	T	SNP	C4orf14	NM_032313	human	genbank	57_37b	-1	provisional	missense	c.1007	p.R336H	1.000	superfamily_SSF52540	superfamily_SSF52540,HMMPfam_MMR_HSR1	-	no_errors	
C5orf36	285600	genome.wustl.edu	37	5	93856500	93856500	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	93856500	93856500	G	A	SNP	C5orf36	NM_001145678	human	genbank	57_37b	-1	validated	silent	c.423	p.L141	0.244	NULL	NULL	-	no_errors	
C5orf42	65250	genome.wustl.edu	37	5	37170358	37170360	+	In_Frame_Del	DEL	GTT	GTT	-	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	GTT	GTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	37170358	37170360	GTT	-	DEL	C5orf42	NM_023073	human	genbank	57_37b	-1	predicted	in_frame_del	c.2887_2885	p.Q962in_frame_del	0.000:0.000:0.004	NULL	NULL	(deletion:cds_exon[37170143,37170433])	no_errors	
C6orf118	168090	genome.wustl.edu	37	6	165715773	165715773	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	165715773	165715773	C	T	SNP	C6orf118	NM_144980	human	genbank	57_37b	-1	validated	nonsense	c.38	p.W13*	0.123	NULL	NULL	-	no_errors	
CA1	759	genome.wustl.edu	37	8	86241930	86241930	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	86241930	86241930	G	A	SNP	CA1	NM_001128829	human	genbank	57_37b	-1	reviewed	silent	c.657	p.V219	0.981	superfamily_Euk_COanhd,HMMPfam_Carb_anhydrase	superfamily_Euk_COanhd,HMMPfam_Carb_anhydrase,PatternScan_ALPHA_CA_1	-	no_errors	
CELSR3	1951	genome.wustl.edu	37	3	48687978	48687978	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48687978	48687978	C	-	DEL	CELSR3	NM_001407	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.6407	p.G2136fs	1.000	HMMSmart_SM00008,HMMPfam_HRM	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_ASX_HYDROXYL,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	(deletion:cds_exon[48687913,48688014])	no_errors	
CLIP1	6249	genome.wustl.edu	37	12	122845563	122845563	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122845563	122845563	G	A	SNP	CLIP1	NM_002956	human	genbank	57_37b	-1	validated	silent	c.948	p.L316	1.000	NULL	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1	-	no_errors	
CNTLN	54875	genome.wustl.edu	37	9	17226215	17226215	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	17226215	17226215	C	T	SNP	CNTLN	NM_017738	human	genbank	57_37b	+1	validated	missense	c.464	p.S155F	1.000	NULL	superfamily_Prefoldin	-	no_errors	
CR1	1378	genome.wustl.edu	37	1	207785317	207785317	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207785317	207785317	C	T	SNP	CR1	NM_000651	human	genbank	57_37b	+1	reviewed	missense	c.6506	p.P2169L	0.107	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
CREB5	9586	genome.wustl.edu	37	7	28547244	28547244	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	28547244	28547244	G	A	SNP	CREB5	NM_182898	human	genbank	57_37b	+1	reviewed	silent	c.180	p.P60	0.266	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_bZIP_1,HMMSmart_BRLZ,PatternScan_BZIP_BASIC	-	no_errors	
DDI2	84301	genome.wustl.edu	37	1	15978378	15978378	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	15978378	15978378	G	T	SNP	DDI2	NM_032341	human	genbank	57_37b	+1	provisional	missense	c.1171	p.A391S	0.996	NULL	superfamily_Ubiquitin-like,HMMPfam_ubiquitin,HMMPfam_Asp_protease,superfamily_Acid proteases	-	no_errors	
DDX60L	91351	genome.wustl.edu	37	4	169344916	169344916	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	169344916	169344916	G	A	SNP	DDX60L	NM_001012967	human	genbank	57_37b	-1	validated	missense	c.1940	p.S647L	0.270	NULL	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
DEFB113	245927	genome.wustl.edu	37	6	49936562	49936562	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	49936562	49936562	C	G	SNP	DEFB113	NM_001037729	human	genbank	57_37b	-1	provisional	missense	c.77	p.R26T	0.000	NULL	NULL	-	no_errors	
EAPP	55837	genome.wustl.edu	37	14	35002708	35002708	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	35002708	35002708	C	T	SNP	EAPP	NM_018453	human	genbank	57_37b	-1	reviewed	silent	c.294	p.P98	0.000	NULL	HMMPfam_Eapp_C	-	no_errors	
EGR4	1961	genome.wustl.edu	37	2	73519008	73519008	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	73519008	73519008	C	T	SNP	EGR4	NM_001965	human	genbank	57_37b	-1	validated	silent	c.1038	p.P346	0.338	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ENSG00000210196	0	genome.wustl.edu	37	MT	15995	15995	+	RNA	SNP	G	A	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	MT	15995	15995	G	A	SNP	ENSG00000210196	ENST00000387461	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	NULL	-	-	-	no_errors	
ENSG00000245561	0	genome.wustl.edu	37	11	33114030	33114030	+	RNA	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	33114030	33114030	G	A	SNP	ENSG00000245561	ENST00000500000	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	
ENSG00000245868	0	genome.wustl.edu	37	16	23489607	23489607	+	RNA	SNP	A	A	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	23489607	23489607	A	T	SNP	ENSG00000245868	ENST00000498959	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	
FAM20C	56975	genome.wustl.edu	37	7	296993	296993	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	296993	296993	C	-	DEL	FAM20C	NM_020223	human	genbank	57_37b	+1	validated	frame_shift_del	c.1386	p.Y462fs	0.985	HMMPfam_DUF1193	HMMPfam_DUF1193	(deletion:cds_exon[296971,297052])	no_errors	
FAM55A	120400	genome.wustl.edu	37	11	114400922	114400922	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	114400922	114400922	C	A	SNP	FAM55A	NM_152315	human	genbank	57_37b	-1	validated	missense	c.382	p.D128Y	0.000	NULL	NULL	-	no_errors	
FAT1	2195	genome.wustl.edu	37	4	187627796	187627796	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	187627796	187627796	G	A	SNP	FAT1	NM_005245	human	genbank	57_37b	-1	reviewed	silent	c.3186	p.D1062	0.925	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_CADHERIN_1,HMMSmart_SM00181,superfamily_EGF/Laminin,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL	-	no_errors	
FRMD4A	55691	genome.wustl.edu	37	10	13708296	13708296	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	13708296	13708296	C	A	SNP	FRMD4A	NM_018027	human	genbank	57_37b	-1	validated	missense	c.1404	p.E468D	1.000	NULL	superfamily_SSF54236,HMMSmart_B41,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,HMMPfam_FERM_C	-	no_errors	
GABRA6	2559	genome.wustl.edu	37	5	161119043	161119043	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	161119043	161119043	C	A	SNP	GABRA6	NM_000811	human	genbank	57_37b	+1	reviewed	missense	c.923	p.A308D	1.000	superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors	
GATA3	2625	genome.wustl.edu	37	10	8115942	8115943	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8115942	8115943	TT	-	DEL	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1291_1292	p.F431fs	1.000:1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	(deletion:cds_exon[8115702,8115986])	no_errors	
GPSM2	29899	genome.wustl.edu	37	1	109465061	109465061	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109465061	109465061	G	C	SNP	GPSM2	NM_013296	human	genbank	57_37b	+1	validated	missense	c.1463	p.G488A	1.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR,HMMPfam_GoLoco,HMMSmart_GoLoco	-	no_errors	
GRIN2B	2904	genome.wustl.edu	37	12	13716856	13716856	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	13716856	13716856	C	A	SNP	GRIN2B	NM_000834	human	genbank	57_37b	-1	reviewed	nonsense	c.3316	p.E1106*	1.000	HMMPfam_NMDAR2_C	superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	-	no_errors	
H2BFWT	158983	genome.wustl.edu	37	X	103268001	103268001	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	103268001	103268001	C	T	SNP	H2BFWT	NM_001002916	human	genbank	57_37b	-1	reviewed	missense	c.232	p.G78R	0.000	superfamily_Histone-fold,HMMSmart_H2B,HMMPfam_Histone	PatternScan_HISTONE_H2B,superfamily_Histone-fold,HMMSmart_H2B,HMMPfam_Histone	-	no_errors	
IL1R1	3554	genome.wustl.edu	37	2	102781403	102781403	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	102781403	102781403	C	G	SNP	IL1R1	NM_000877	human	genbank	57_37b	+1	reviewed	missense	c.231	p.H77Q	0.011	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin,superfamily_Toll/Interleukin receptor TIR domain,HMMSmart_SM00255,HMMPfam_TIR	-	no_errors	
KIAA1462	57608	genome.wustl.edu	37	10	30318049	30318049	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	30318049	30318049	G	A	SNP	KIAA1462	NM_020848	human	genbank	57_37b	-1	validated	missense	c.1028	p.P343L	1.000	NULL	NULL	-	no_errors	
KIF21B	23046	genome.wustl.edu	37	1	200959737	200959737	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	200959737	200959737	G	C	SNP	KIF21B	NM_017596	human	genbank	57_37b	-1	provisional	silent	c.2802	p.V934	0.993	superfamily_WD40_like	HMMSmart_KISc,superfamily_SSF52540,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_WD40_like,superfamily_Prefoldin,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
KIF21B	23046	genome.wustl.edu	37	1	200960092	200960092	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	200960092	200960092	G	A	SNP	KIF21B	NM_017596	human	genbank	57_37b	-1	provisional	silent	c.2640	p.F880	0.974	superfamily_WD40_like	HMMSmart_WD40,HMMPfam_Kinesin,HMMSmart_KISc,superfamily_Prefoldin,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SSF52540	-	no_errors	
LACTB	114294	genome.wustl.edu	37	15	63433916	63433916	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	63433916	63433916	T	C	SNP	LACTB	NM_032857	human	genbank	57_37b	+1	reviewed	missense	c.1556	p.V519A	0.997	NULL	superfamily_beta-lactamase/transpeptidase-like,HMMPfam_Beta-lactamase	-	no_errors	
LCN10	414332	genome.wustl.edu	37	9	139634403	139634403	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	139634403	139634403	G	C	SNP	LCN10	NM_001001712	human	genbank	57_37b	-1	validated	missense	c.573	p.D191E	0.486	superfamily_Calycin	superfamily_Calycin,PatternScan_LIPOCALIN	-	no_errors	
LOC100288436	0	genome.wustl.edu	37	9	30559345	30559345	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	30559345	30559345	C	T	SNP	LOC100288436	XM_002342887	human	genbank	57_37b	-1	model	missense	c.93	p.M31I	0.971	NULL	NULL	-	no_errors	
LRIG2	9860	genome.wustl.edu	37	1	113662083	113662083	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	113662083	113662083	C	T	SNP	LRIG2	NM_014813	human	genbank	57_37b	+1	provisional	missense	c.2909	p.A970V	1.000	NULL	superfamily_SSF52047,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig,HMMPfam_I-set,HMMSmart_IGc2	-	no_errors	
MAGEL2	54551	genome.wustl.edu	37	15	23889881	23889881	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23889881	23889881	G	-	DEL	MAGEL2	NM_019066	human	genbank	57_37b	-1	validated	frame_shift_del	c.1200	p.S401fs	0.000	NULL	HMMPfam_MAGE	(deletion:cds_exon[23889140,23891080])	no_errors	
MKRN3	7681	genome.wustl.edu	37	15	23812230	23812230	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23812230	23812230	G	C	SNP	MKRN3	NM_005664	human	genbank	57_37b	+1	reviewed	missense	c.1301	p.G434A	0.042	NULL	HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1	-	no_errors	
MLPH	79083	genome.wustl.edu	37	2	238436082	238436082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	238436082	238436082	G	A	SNP	MLPH	NM_024101	human	genbank	57_37b	+1	reviewed	missense	c.943	p.D315N	0.464	NULL	superfamily_FYVE/PHD zinc finger,HMMPfam_MOBP	-	no_errors	
MMP26	56547	genome.wustl.edu	37	11	5010971	5010971	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5010971	5010971	G	T	SNP	MMP26	NM_021801	human	genbank	57_37b	+1	reviewed	missense	c.193	p.G65W	0.006	NULL	PatternScan_CYSTEINE_SWITCH,HMMSmart_ZnMc,superfamily_SSF55486,HMMPfam_Peptidase_M10,PatternScan_ZINC_PROTEASE	-	no_errors	
MUC12	10071	genome.wustl.edu	37	7	100647960	100647960	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100647960	100647960	G	T	SNP	MUC12	ENST00000379442	human	ensembl	57_37b	+1	known	missense	c.14545	p.G4849C	0.016	NULL	PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_SEA,HMMSmart_SEA	-	no_errors	
MYO3A	53904	genome.wustl.edu	37	10	26463134	26463134	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	26463134	26463134	C	A	SNP	MYO3A	NM_017433	human	genbank	57_37b	+1	reviewed	missense	c.3941	p.A1314E	0.000	superfamily_SSF52540	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ	-	no_errors	
NCAPD3	23310	genome.wustl.edu	37	11	134062803	134062803	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	134062803	134062803	G	A	SNP	NCAPD3	NM_015261	human	genbank	57_37b	-1	validated	missense	c.1826	p.A609V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_HEAT	-	no_errors	
NID2	22795	genome.wustl.edu	37	14	52485862	52485862	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	52485862	52485862	C	T	SNP	NID2	NM_007361	human	genbank	57_37b	-1	validated	nonsense	c.2945	p.W982*	1.000	superfamily_Thyroglobulin type-1 domain,HMMPfam_Thyroglobulin_1,PatternScan_THYROGLOBULIN_1_1,HMMSmart_SM00211	HMMSmart_SM00539,HMMPfam_NIDO,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_ASX_HYDROXYL,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,superfamily_Thyroglobulin type-1 domain,HMMPfam_Thyroglobulin_1,PatternScan_THYROGLOBULIN_1_1,HMMSmart_SM00211,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b	-	no_errors	
NRP1	8829	genome.wustl.edu	37	10	33543059	33543059	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	33543059	33543059	G	A	SNP	NRP1	NM_003873	human	genbank	57_37b	-1	validated	missense	c.878	p.A293V	0.994	superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1	-	no_errors	
ODF2	4957	genome.wustl.edu	37	9	131247750	131247750	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131247750	131247750	A	T	SNP	ODF2	NM_002540	human	genbank	57_37b	+1	reviewed	missense	c.1325	p.N442I	0.987	NULL	NULL	-	no_errors	
OR6N1	128372	genome.wustl.edu	37	1	158735726	158735726	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158735726	158735726	G	A	SNP	OR6N1	NM_001005185	human	genbank	57_37b	-1	provisional	silent	c.747	p.L249	0.910	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PCDHA1	56147	genome.wustl.edu	37	5	140166325	140166325	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140166325	140166325	G	A	SNP	PCDHA1	NM_018900	human	genbank	57_37b	+1	reviewed	silent	c.450	p.S150	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PGAP3	93210	genome.wustl.edu	37	17	37842260	37842260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	37842260	37842260	C	T	SNP	PGAP3	NM_033419	human	genbank	57_37b	-1	validated	missense	c.194	p.R65Q	0.033	HMMPfam_Per1	HMMPfam_Per1	-	no_errors	
PKIG	11142	genome.wustl.edu	37	20	43243339	43243339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	43243339	43243339	G	A	SNP	PKIG	NM_007066	human	genbank	57_37b	+1	reviewed	missense	c.142	p.E48K	0.918	HMMPfam_PKI	HMMPfam_PKI	-	no_errors	
POLG	5428	genome.wustl.edu	37	15	89870240	89870240	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	89870240	89870240	C	A	SNP	POLG	NM_001126131	human	genbank	57_37b	-1	reviewed	missense	c.1488	p.K496N	1.000	NULL	superfamily_SSF56672,HMMPfam_DNA_pol_A,HMMSmart_POLAc,PatternScan_DNA_POLYMERASE_A	-	no_errors	
POU3F4	5456	genome.wustl.edu	37	X	82763876	82763876	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	82763876	82763876	G	T	SNP	POU3F4	NM_000307	human	genbank	57_37b	+1	reviewed	missense	c.544	p.D182Y	1.000	NULL	HMMPfam_Pou,HMMSmart_POU,superfamily_Lambda_like_DNA,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
PYHIN1	149628	genome.wustl.edu	37	1	158912052	158912052	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158912052	158912052	G	T	SNP	PYHIN1	NM_152501	human	genbank	57_37b	+1	validated	missense	c.865	p.V289L	0.017	HMMPfam_HIN	HMMPfam_PAAD_DAPIN,HMMPfam_HIN	-	no_errors	
RGS14	10636	genome.wustl.edu	37	5	176793928	176793928	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176793928	176793928	C	T	SNP	RGS14	NM_006480	human	genbank	57_37b	+1	reviewed	silent	c.376	p.L126	1.000	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315,superfamily_Ubiquitin-like,HMMPfam_RBD,HMMSmart_SM00455,HMMPfam_GoLoco,HMMSmart_SM00390	-	no_errors	
RNF111	54778	genome.wustl.edu	37	15	59368377	59368380	+	Frame_Shift_Del	DEL	CTCT	CTCT	-	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	CTCT	CTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	59368377	59368380	CTCT	-	DEL	RNF111	NM_017610	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1911_1914	p.L639fs	0.975:0.997:1.000:0.991	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	(deletion:cds_exon[59368153,59368414])	no_errors	
RNF138P1	379013	genome.wustl.edu	37	5	54826742	54826742	+	RNA	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54826742	54826742	C	T	SNP	RNF138P1	ENST00000502191	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	
RPIA	22934	genome.wustl.edu	37	2	89034083	89034083	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	89034083	89034083	C	T	SNP	RPIA	NM_144563	human	genbank	57_37b	+1	reviewed	silent	c.477	p.I159	0.980	superfamily_SSF100950,HMMPfam_Rib_5-P_isom_A	superfamily_SSF100950,HMMPfam_Rib_5-P_isom_A,superfamily_SSF75445	-	no_errors	
SBF2	81846	genome.wustl.edu	37	11	10015496	10015496	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	10015496	10015496	C	T	SNP	SBF2	NM_030962	human	genbank	57_37b	-1	reviewed	missense	c.1025	p.R342Q	1.000	NULL	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_GRAM,HMMSmart_SM00568,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
SH3TC1	54436	genome.wustl.edu	37	4	8224596	8224596	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	8224596	8224596	A	C	SNP	SH3TC1	NM_018986	human	genbank	57_37b	+1	validated	missense	c.1142	p.E381A	0.939	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like	-	no_errors	
SLC25A2	83884	genome.wustl.edu	37	5	140683389	140683389	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140683389	140683389	G	A	SNP	SLC25A2	NM_031947	human	genbank	57_37b	-1	reviewed	missense	c.44	p.A15V	0.632	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors	
SLCO2B1	11309	genome.wustl.edu	37	11	74880325	74880325	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	74880325	74880325	C	A	SNP	SLCO2B1	NM_007256	human	genbank	57_37b	+1	validated	missense	c.556	p.L186M	0.005	superfamily_MFS general substrate transporter,HMMPfam_OATP	superfamily_MFS general substrate transporter,HMMPfam_OATP	-	no_errors	
SPATA13	221178	genome.wustl.edu	37	13	24858359	24858359	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	24858359	24858359	G	T	SNP	SPATA13	NM_153023	human	genbank	57_37b	+1	validated	missense	c.376	p.A126S	1.000	NULL	PatternScan_PROTAMINE_P1,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
SPTA1	6708	genome.wustl.edu	37	1	158583632	158583632	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158583632	158583632	G	T	SNP	SPTA1	NM_003126	human	genbank	57_37b	-1	reviewed	missense	c.6868	p.R2290S	0.979	superfamily_EF-hand	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_EF-hand,HMMPfam_efhand_Ca_insen	-	no_errors	
SPTBN4	57731	genome.wustl.edu	37	19	41008789	41008789	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41008789	41008789	G	A	SNP	SPTBN4	NM_020971	human	genbank	57_37b	+1	reviewed	silent	c.1311	p.K437	1.000	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
SRPX	8406	genome.wustl.edu	37	X	38016148	38016148	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	38016148	38016148	C	G	SNP	SRPX	NM_006307	human	genbank	57_37b	-1	validated	splice_site	c.1089+1	e8+1	1.000	-	-	-	no_errors	
SUFU	51684	genome.wustl.edu	37	10	104356987	104356987	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104356987	104356987	G	A	SNP	SUFU	NM_016169	human	genbank	57_37b	+1	provisional	missense	c.847	p.E283K	1.000	HMMPfam_SUFU	superfamily_Suppressor of Fused N-terminal domain,HMMPfam_SUFU	-	no_errors	
SYNPO2	171024	genome.wustl.edu	37	4	119944647	119944647	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	119944647	119944647	C	T	SNP	SYNPO2	NM_133477	human	genbank	57_37b	+1	validated	silent	c.168	p.I56	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors	
TNXB	7148	genome.wustl.edu	37	6	32064509	32064509	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32064509	32064509	G	C	SNP	TNXB	NM_019105	human	genbank	57_37b	-1	reviewed	missense	c.1121	p.P374R	0.997	HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_EGF/Laminin	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors	
TRIM28	10155	genome.wustl.edu	37	19	59059870	59059870	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	59059870	59059870	C	T	SNP	TRIM28	NM_005762	human	genbank	57_37b	+1	reviewed	missense	c.1234	p.R412C	1.000	NULL	superfamily_RING/U-box,HMMPfam_zf-C3HC4,HMMSmart_SM00184,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00502,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00297	-	no_errors	
TRIM6-TRIM34	445372	genome.wustl.edu	37	11	5624497	5624497	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	5624497	5624497	C	G	SNP	TRIM6-TRIM34	NM_001003819	human	genbank	57_37b	+1	reviewed	missense	c.39	p.I13M	0.009	NULL	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_BBOX,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
TTC37	9652	genome.wustl.edu	37	5	94861323	94861323	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	94861323	94861323	G	A	SNP	TTC37	NM_014639	human	genbank	57_37b	-1	provisional	missense	c.1189	p.R397W	1.000	superfamily_Prenyl_trans	HMMSmart_TPR,superfamily_SSF48452,HMMPfam_TPR_1,superfamily_Prenyl_trans,HMMPfam_Sel1,HMMSmart_SEL1	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179403912	179403912	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179403912	179403912	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.91040	p.S30347F	1.000	HMMSmart_SM00060,HMMPfam_fn3	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179444429	179444429	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179444429	179444429	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	nonsense	c.59785	p.R19929*	1.000	HMMPfam_fn3,HMMSmart_SM00060	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors	
TUB	7275	genome.wustl.edu	37	11	8060462	8060462	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	8060462	8060462	C	A	SNP	TUB	NM_003320	human	genbank	57_37b	+1	reviewed	missense	c.42	p.F14L	0.042	NULL	superfamily_Tubby_C,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-	no_errors	
UCP1	7350	genome.wustl.edu	37	4	141484633	141484633	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	141484633	141484633	G	A	SNP	UCP1	NM_021833	human	genbank	57_37b	-1	reviewed	missense	c.365	p.T122M	0.102	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors	
UPK3B	80761	genome.wustl.edu	37	7	76141173	76141173	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	76141173	76141173	G	A	SNP	UPK3B	NM_030570	human	genbank	57_37b	+1	validated	silent	c.600	p.A200	0.003	NULL	NULL	-	no_errors	
UTRN	7402	genome.wustl.edu	37	6	145095471	145095471	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	145095471	145095471	A	C	SNP	UTRN	NM_007124	human	genbank	57_37b	+1	reviewed	missense	c.8603	p.K2868T	1.000	superfamily_SSF47473,HMMPfam_efhand_1	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,HMMPfam_Spectrin,superfamily_Spectrin,HMMSmart_SPEC,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_SSF47473,HMMPfam_efhand_1,HMMPfam_efhand_2,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1	-	no_errors	
ZBBX	79740	genome.wustl.edu	37	3	167083758	167083758	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	167083758	167083758	G	A	SNP	ZBBX	NM_024687	human	genbank	57_37b	-1	validated	silent	c.189	p.S63	0.995	NULL	HMMPfam_zf-B_box	-	no_errors	
ZFP28	140612	genome.wustl.edu	37	19	57066677	57066677	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57066677	57066677	A	G	SNP	ZFP28	NM_020828	human	genbank	57_37b	+1	provisional	silent	c.2523	p.T841	0.000	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF536	9745	genome.wustl.edu	37	19	31048070	31048070	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AO-A0J3-01	TCGA-AO-A0J3-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	31048070	31048070	G	A	SNP	ZNF536	NM_014717	human	genbank	57_37b	+1	provisional	silent	c.3902	p.*1301	1.000	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
