Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AMPD1	270	genome.wustl.edu	37	1	115220952	115220952	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	115220952	115220952	A	G	SNP	AMPD1	NM_000036	human	genbank	57_37b	-1	reviewed	splice_site	c.1092+2	e8+2	1.000	-	-	-	no_errors	
ANKRD12	23253	genome.wustl.edu	37	18	9195691	9195691	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	9195691	9195691	A	G	SNP	ANKRD12	NM_015208	human	genbank	57_37b	+1	validated	missense	c.230	p.D77G	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
ATP11A	23250	genome.wustl.edu	37	13	113439503	113439503	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	113439503	113439503	G	T	SNP	ATP11A	NM_032189	human	genbank	57_37b	+1	reviewed	nonsense	c.94	p.E32*	1.000	NULL	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors	
C2CD2	25966	genome.wustl.edu	37	21	43327793	43327793	+	Silent	SNP	C	T	T	rs3746904	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	43327793	43327793	C	T	SNP	C2CD2	NM_015500	human	genbank	57_37b	-1	validated	silent	c.1119	p.S373	0.000	superfamily_C2_CaLB	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-		
C9orf171	0	genome.wustl.edu	37	9	135374976	135374976	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	135374976	135374976	G	A	SNP	C9orf171	NM_207417	human	genbank	57_37b	+1	predicted	silent	c.621	p.G207	0.983	NULL	NULL	-	no_errors	
CA4	762	genome.wustl.edu	37	17	58234014	58234014	+	Missense_Mutation	SNP	G	G	A	rs121434552	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	58234014	58234014	G	A	SNP	CA4	NM_000717	human	genbank	57_37b	+1	reviewed	missense	c.206	p.R69H	0.000	superfamily_Carbonic anhydrase,HMMPfam_Carb_anhydrase	superfamily_Carbonic anhydrase,HMMPfam_Carb_anhydrase,PatternScan_ALPHA_CA_1	-		
CARD14	79092	genome.wustl.edu	37	17	78166385	78166385	+	Silent	SNP	C	C	T	rs11658460	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78166385	78166385	C	T	SNP	CARD14	NM_024110	human	genbank	57_37b	+1	reviewed	silent	c.1323	p.D441	0.002	NULL	superfamily_DEATH domain,HMMPfam_CARD,superfamily_PDZ domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-		
CDS2	8760	genome.wustl.edu	37	20	5157348	5157348	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	5157348	5157348	G	A	SNP	CDS2	NM_003818	human	genbank	57_37b	+1	reviewed	missense	c.346	p.V116I	1.000	HMMPfam_CTP_transf_1	HMMPfam_CTP_transf_1,PatternScan_CDS	-	no_errors	
CEP290	80184	genome.wustl.edu	37	12	88442981	88442981	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	88442981	88442981	C	T	SNP	CEP290	NM_025114	human	genbank	57_37b	-1	reviewed	missense	c.7420	p.V2474I	0.001	NULL	NULL	-	no_errors	
CFHR5	81494	genome.wustl.edu	37	1	196967316	196967316	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	196967316	196967316	G	A	SNP	CFHR5	NM_030787	human	genbank	57_37b	+1	reviewed	silent	c.1029	p.K343	0.000	superfamily_Complement_control_module,HMMSmart_CCP	superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors	
CLDN6	9074	genome.wustl.edu	37	16	3065517	3065517	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3065517	3065517	G	A	SNP	CLDN6	NM_021195	human	genbank	57_37b	-1	validated	missense	c.506	p.A169V	0.994	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin,PatternScan_CLAUDIN	-	no_errors	
COL19A1	1310	genome.wustl.edu	37	6	70840095	70840095	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	70840095	70840095	G	T	SNP	COL19A1	NM_001858	human	genbank	57_37b	+1	reviewed	nonsense	c.1363	p.G455*	0.000	NULL	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMPfam_Collagen	-	no_errors	
COL22A1	169044	genome.wustl.edu	37	8	139697498	139697498	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	139697498	139697498	C	T	SNP	COL22A1	NM_152888	human	genbank	57_37b	-1	validated	missense	c.2920	p.A974T	0.002	HMMPfam_Collagen	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Collagen	-	no_errors	
CSMD1	64478	genome.wustl.edu	37	8	3015484	3015484	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	3015484	3015484	C	T	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	missense	c.5852	p.R1951H	0.863	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
CYP4F12	66002	genome.wustl.edu	37	19	15784437	15784437	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15784437	15784437	G	A	SNP	CYP4F12	NM_023944	human	genbank	57_37b	+1	reviewed	missense	c.98	p.R33H	0.020	NULL	superfamily_Cytochrome P450,HMMPfam_p450,PatternScan_CYTOCHROME_P450	-	no_errors	
DGKD	8527	genome.wustl.edu	37	2	234357797	234357797	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234357797	234357797	G	A	SNP	DGKD	NM_152879	human	genbank	57_37b	+1	reviewed	missense	c.1663	p.D555N	0.990	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors	
DGKG	1608	genome.wustl.edu	37	3	185969589	185969589	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	185969589	185969589	C	T	SNP	DGKG	NM_001346	human	genbank	57_37b	-1	reviewed	missense	c.1720	p.V574I	1.000	NULL	superfamily_EF-hand,HMMSmart_SM00054,PatternScan_EF_HAND_1,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045	-	no_errors	
DSEL	92126	genome.wustl.edu	37	18	65180278	65180278	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	65180278	65180278	G	A	SNP	DSEL	NM_032160	human	genbank	57_37b	-1	validated	missense	c.1598	p.A533V	0.900	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
ENSG00000123908	0	genome.wustl.edu	37	8	141549439	141549439	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	141549439	141549439	A	T	SNP	ENSG00000123908	ENST00000220592	human	ensembl	57_37b	-1	known	missense	c.2149	p.C717S	1.000	superfamily_Ribonuclease H-like,HMMPfam_Piwi	superfamily_PAZ domain,HMMPfam_DUF1785,HMMPfam_PAZ,superfamily_Ribonuclease H-like,HMMPfam_Piwi	-	no_errors	
ENSG00000226418	0	genome.wustl.edu	37	4	47938686	47938686	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	47938686	47938686	G	A	SNP	ENSG00000226418	ENST00000420489	human	ensembl	57_37b	+1	known	missense	c.128	p.S43N	0.246	NULL	NULL	-	no_errors	
ENSG00000244864	0	genome.wustl.edu	37	14	95911060	95911060	+	RNA	SNP	C	T	T	rs8007261	byCluster;byFrequency;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	95911060	95911060	C	T	SNP	ENSG00000244864	ENST00000501875	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-		
EPS8	2059	genome.wustl.edu	37	12	15800121	15800121	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	15800121	15800121	T	C	SNP	EPS8	NM_004447	human	genbank	57_37b	-1	reviewed	missense	c.1508	p.H503R	0.039	NULL	HMMSmart_PTB,superfamily_SSF50729,HMMPfam_PTB,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors	
F7	2155	genome.wustl.edu	37	13	113771834	113771834	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	113771834	113771834	C	T	SNP	F7	NM_000131	human	genbank	57_37b	+1	reviewed	silent	c.729	p.I243	0.000	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	HMMSmart_SM00069,superfamily_GLA-domain,HMMPfam_Gla,PatternScan_GLA_1,PatternScan_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,superfamily_EGF/Laminin,PatternScan_EGF_2,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
FLJ16779	0	genome.wustl.edu	37	20	61888621	61888621	+	RNA	SNP	G	G	A	rs112221121	byCluster;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	61888621	61888621	G	A	SNP	FLJ16779	NR_024389	human	genbank	57_37b	+1	predicted	rna	NULL	NULL	0.014	-	-	-		
FLRT2	23768	genome.wustl.edu	37	14	86089263	86089263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	86089263	86089263	C	T	SNP	FLRT2	NM_013231	human	genbank	57_37b	+1	reviewed	missense	c.1405	p.R469C	1.000	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors	
GATA3	2625	genome.wustl.edu	37	10	8115878	8115879	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	8115878	8115879	-	T	INS	GATA3	NM_001002295	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.1227_1228	p.S410fs	0.385:1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors	
GLYR1	84656	genome.wustl.edu	37	16	4864567	4864573	+	Frame_Shift_Del	DEL	AGGCGAA	AGGCGAA	-	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	AGGCGAA	AGGCGAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4864567	4864573	AGGCGAA	-	DEL	GLYR1	NM_032569	human	genbank	57_37b	-1	validated	frame_shift_del	c.988_982	p.F328fs	1.000:1.000:1.000:1.000:0.986:1.000:1.000	HMMPfam_NAD_binding_2,superfamily_NAD(P)-binding Rossmann-fold domains	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_AT_hook,HMMPfam_NAD_binding_2,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like	(deletion:cds_exon[4864538,4864648])	no_errors	
GPR17	2840	genome.wustl.edu	37	2	128409054	128409054	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	128409054	128409054	G	A	SNP	GPR17	NM_005291	human	genbank	57_37b	+1	validated	missense	c.829	p.V277M	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
GPR64	10149	genome.wustl.edu	37	X	19017274	19017274	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	19017274	19017274	C	A	SNP	GPR64	NM_001079858	human	genbank	57_37b	-1	validated	missense	c.2454	p.K818N	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_2	HMMPfam_GPS,HMMSmart_SM00303,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors	
IPPK	64768	genome.wustl.edu	37	9	95378177	95378177	+	Silent	SNP	G	G	A	rs112162638	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	95378177	95378177	G	A	SNP	IPPK	NM_022755	human	genbank	57_37b	-1	validated	silent	c.1413	p.N471	0.000	NULL	HMMPfam_Ins_P5_2-kin	-		
ITGAD	3681	genome.wustl.edu	37	16	31424209	31424209	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31424209	31424209	G	A	SNP	ITGAD	NM_005353	human	genbank	57_37b	+1	validated	silent	c.1758	p.A586	0.094	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors	
KCNB1	3745	genome.wustl.edu	37	20	47989776	47989776	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	47989776	47989776	G	A	SNP	KCNB1	NM_004975	human	genbank	57_37b	-1	reviewed	missense	c.2321	p.P774L	1.000	NULL	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Kv2channel	-	no_errors	
KCNH4	23415	genome.wustl.edu	37	17	40322182	40322182	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40322182	40322182	C	T	SNP	KCNH4	NM_012285	human	genbank	57_37b	-1	reviewed	missense	c.1333	p.V445M	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS,HMMSmart_PAC,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	-	no_errors	
KRTAP20-3	0	genome.wustl.edu	37	21	32015215	32015215	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	32015215	32015215	A	G	SNP	KRTAP20-3	NM_001128077	human	genbank	57_37b	+1	validated	missense	c.8	p.Y3C	0.000	NULL	NULL	-	no_errors	
MAEL	84944	genome.wustl.edu	37	1	166990949	166990949	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	166990949	166990949	G	A	SNP	MAEL	NM_032858	human	genbank	57_37b	+1	validated	missense	c.1162	p.V388I	1.000	NULL	HMMPfam_DUF1898,superfamily_HMG-box	-	no_errors	
MAGEC2	51438	genome.wustl.edu	37	X	141290906	141290906	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	141290906	141290906	G	C	SNP	MAGEC2	NM_016249	human	genbank	57_37b	-1	reviewed	missense	c.868	p.P290A	0.004	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors	
MAP1LC3C	440738	genome.wustl.edu	37	1	242159611	242159611	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	242159611	242159611	T	A	SNP	MAP1LC3C	NM_001004343	human	genbank	57_37b	-1	validated	missense	c.298	p.T100S	1.000	superfamily_SSF54236,HMMPfam_MAP1_LC3	superfamily_SSF54236,HMMPfam_MAP1_LC3	-	no_errors	
MRPL15	29088	genome.wustl.edu	37	8	55060178	55060178	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	55060178	55060178	C	G	SNP	MRPL15	NM_014175	human	genbank	57_37b	+1	reviewed	missense	c.790	p.Q264E	1.000	NULL	PatternScan_RIBOSOMAL_L15,HMMPfam_Ribosomal_L15,superfamily_SSF52080	-	no_errors	
MYO1D	4642	genome.wustl.edu	37	17	30980907	30980907	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	30980907	30980907	C	T	SNP	MYO1D	NM_015194	human	genbank	57_37b	-1	provisional	missense	c.2549	p.R850Q	1.000	HMMPfam_Myosin_TH1	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_Myosin_TH1	-	no_errors	
NAT10	55226	genome.wustl.edu	37	11	34160944	34160944	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	34160944	34160944	G	T	SNP	NAT10	NM_024662	human	genbank	57_37b	+1	validated	missense	c.2321	p.R774L	1.000	NULL	HMMPfam_DUF1726,HMMPfam_DUF699,superfamily_Acyl-CoA N-acyltransferases (Nat)	-	no_errors	
NIN	51199	genome.wustl.edu	37	14	51237255	51237255	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	51237255	51237255	G	A	SNP	NIN	NM_020921	human	genbank	57_37b	-1	reviewed	nonsense	c.1285	p.R429*	0.934	NULL	superfamily_EF-hand,HMMPfam_efhand	-	no_errors	
NLRP9	338321	genome.wustl.edu	37	19	56243838	56243838	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	56243838	56243838	G	A	SNP	NLRP9	NM_176820	human	genbank	57_37b	-1	reviewed	silent	c.1359	p.A453	0.808	NULL	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368,PatternScan_RIBOSOMAL_S2_1	-	no_errors	
NPR2	4882	genome.wustl.edu	37	9	35792632	35792632	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35792632	35792632	C	G	SNP	NPR2	NM_003995	human	genbank	57_37b	+1	reviewed	missense	c.227	p.S76C	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_ANF_RECEPTORS,HMMSmart_SM00220,HMMSmart_SM00219,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors	
NRXN3	9369	genome.wustl.edu	37	14	80328161	80328161	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	80328161	80328161	G	A	SNP	NRXN3	NM_004796	human	genbank	57_37b	+1	reviewed	missense	c.3040	p.D1014N	1.000	HMMSmart_4.1m	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2,HMMSmart_LamG,HMMSmart_EGF,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMSmart_4.1m	-	no_errors	
OTX2	5015	genome.wustl.edu	37	14	57269058	57269058	+	Nonsense_Mutation	SNP	G	G	A	rs104894464	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	57269058	57269058	G	A	SNP	OTX2	NM_021728	human	genbank	57_37b	-1	reviewed	nonsense	c.289	p.R97*	1.000	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMPfam_TF_Otx	-		
OXR1	55074	genome.wustl.edu	37	8	107696538	107696538	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	107696538	107696538	T	G	SNP	OXR1	NM_018002	human	genbank	57_37b	+1	validated	missense	c.476	p.V159G	0.998	NULL	superfamily_LysM domain,HMMSmart_SM00257,HMMPfam_LysM,HMMPfam_GRAM,HMMSmart_SM00584,HMMPfam_TLD	-	no_errors	
PCDHA7	56141	genome.wustl.edu	37	5	140215374	140215374	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140215374	140215374	C	T	SNP	PCDHA7	NM_018910	human	genbank	57_37b	+1	reviewed	missense	c.1406	p.P469L	0.220	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHB11	56125	genome.wustl.edu	37	5	140580102	140580102	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140580102	140580102	G	T	SNP	PCDHB11	NM_018931	human	genbank	57_37b	+1	reviewed	missense	c.755	p.R252L	0.000	superfamily_Cadherin,HMMPfam_Cadherin	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGA5	56110	genome.wustl.edu	37	5	140745927	140745927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140745927	140745927	G	A	SNP	PCDHGA5	NM_018918	human	genbank	57_37b	+1	reviewed	missense	c.2030	p.S677N	0.115	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PDE3A	5139	genome.wustl.edu	37	12	20766410	20766410	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	20766410	20766410	G	A	SNP	PDE3A	NM_000921	human	genbank	57_37b	+1	validated	missense	c.1045	p.V349I	1.000	NULL	superfamily_SSF109604,HMMSmart_HDc,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors	
PGAP2	27315	genome.wustl.edu	37	11	3845298	3845298	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	3845298	3845298	C	T	SNP	PGAP2	NM_001145439	human	genbank	57_37b	+1	validated	missense	c.211	p.R71W	0.002	NULL	NULL	-	no_errors	
PLSCR2	57047	genome.wustl.edu	37	3	146171913	146171913	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	146171913	146171913	T	G	SNP	PLSCR2	NM_020359	human	genbank	57_37b	-1	provisional	missense	c.359	p.Y120S	1.000	HMMPfam_Scramblase	HMMPfam_Scramblase	-	no_errors	
PPFIA1	8500	genome.wustl.edu	37	11	70202345	70202345	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	70202345	70202345	G	A	SNP	PPFIA1	NM_003626	human	genbank	57_37b	+1	reviewed	missense	c.2567	p.R856H	0.895	NULL	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1,HMMPfam_SAM_2	-	no_errors	
PXDNL	137902	genome.wustl.edu	37	8	52359611	52359611	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	52359611	52359611	G	A	SNP	PXDNL	NM_144651	human	genbank	57_37b	-1	validated	missense	c.1478	p.S493L	0.695	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_L domain-like,HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00082,HMMPfam_LRRCT,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1	-	no_errors	
RABGEF1	27342	genome.wustl.edu	37	7	66270205	66270205	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	66270205	66270205	A	G	SNP	RABGEF1	NM_014504	human	genbank	57_37b	+1	validated	missense	c.899	p.N300S	0.998	superfamily_SSF109993,HMMSmart_VPS9,HMMPfam_VPS9	HMMPfam_zf-A20,HMMSmart_ZnF_A20,superfamily_SSF109993,HMMSmart_VPS9,HMMPfam_VPS9	-	no_errors	
RAE1	8480	genome.wustl.edu	37	20	55953115	55953115	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	55953115	55953115	G	A	SNP	RAE1	NM_001015885	human	genbank	57_37b	+1	reviewed	missense	c.1067	p.R356H	1.000	superfamily_WD40 repeat-like	HMMSmart_SM00320,HMMPfam_WD40,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1	-	no_errors	
RAPGEF6	51735	genome.wustl.edu	37	5	130769161	130769161	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	130769161	130769161	G	A	SNP	RAPGEF6	NM_016340	human	genbank	57_37b	-1	validated	silent	c.3936	p.H1312	0.610	NULL	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_RA,HMMSmart_SM00314,HMMSmart_SM00147,HMMPfam_RasGEF	-	no_errors	
RDM1	201299	genome.wustl.edu	37	17	34249590	34249590	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	34249590	34249590	C	A	SNP	RDM1	NM_145654	human	genbank	57_37b	-1	reviewed	missense	c.658	p.V220F	0.956	superfamily_dsRNA-binding domain-like	superfamily_dsRNA-binding domain-like	-	no_errors	
RIC8A	60626	genome.wustl.edu	37	11	212446	212446	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	212446	212446	G	C	SNP	RIC8A	NM_021932	human	genbank	57_37b	+1	provisional	missense	c.1000	p.V334L	0.993	HMMPfam_Ric8	HMMPfam_Ric8	-	no_errors	
RND1	27289	genome.wustl.edu	37	12	49251827	49251827	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49251827	49251827	G	C	SNP	RND1	NM_014470	human	genbank	57_37b	-1	provisional	missense	c.651	p.I217M	1.000	NULL	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174	-	no_errors	
RYR2	6262	genome.wustl.edu	37	1	237551480	237551480	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	237551480	237551480	G	A	SNP	RYR2	NM_001035	human	genbank	57_37b	+1	reviewed	missense	c.770	p.R257Q	1.000	HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815)	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
SARDH	1757	genome.wustl.edu	37	9	136573412	136573412	+	Silent	SNP	G	G	A	rs2073815	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	136573412	136573412	G	A	SNP	SARDH	NM_001134707	human	genbank	57_37b	-1	reviewed	silent	c.1467	p.H489	0.992	superfamily_SSF103025	superfamily_SSF51905,HMMPfam_DAO,superfamily_SSF54373,superfamily_SSF103025,HMMPfam_GCV_T,HMMPfam_GCV_T_C,superfamily_SSF101790	-		
SCN10A	6336	genome.wustl.edu	37	3	38793791	38793791	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38793791	38793791	G	T	SNP	SCN10A	NM_006514	human	genbank	57_37b	-1	validated	missense	c.1674	p.S558R	0.283	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors	
SCN2A	6326	genome.wustl.edu	37	2	166245632	166245632	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	166245632	166245632	C	A	SNP	SCN2A	NM_001040142	human	genbank	57_37b	+1	reviewed	silent	c.5316	p.I1772	0.956	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
SGK2	10110	genome.wustl.edu	37	20	42195142	42195142	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	42195142	42195142	T	C	SNP	SGK2	NM_016276	human	genbank	57_37b	+1	reviewed	missense	c.187	p.S63P	0.978	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	no_errors	
SHOX	6473	genome.wustl.edu	37	X	591785	591785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	591785	591785	G	A	SNP	SHOX	NM_000451	human	genbank	57_37b	+1	reviewed	silent	c.153	p.T51	0.978	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1,HMMPfam_OAR	-	no_errors	
SULT1C3	442038	genome.wustl.edu	37	2	108863661	108863661	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	108863661	108863661	T	C	SNP	SULT1C3	NM_001008743	human	genbank	57_37b	+1	provisional	missense	c.11	p.I4T	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	-	no_errors	
TANC1	85461	genome.wustl.edu	37	2	160084463	160084463	+	Missense_Mutation	SNP	G	G	A	rs114600013	by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	160084463	160084463	G	A	SNP	TANC1	NM_033394	human	genbank	57_37b	+1	validated	missense	c.4037	p.R1346Q	1.000	superfamily_TPR-like,HMMPfam_TPR_1,HMMSmart_SM00028	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00248,HMMPfam_Ank,superfamily_Ankyrin repeat,HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1,HMMPfam_TPR_2	-		
TEX14	56155	genome.wustl.edu	37	17	56690897	56690897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	56690897	56690897	C	T	SNP	TEX14	NM_198393	human	genbank	57_37b	-1	reviewed	missense	c.890	p.R297Q	1.000	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr	-	no_errors	
TIMM44	10469	genome.wustl.edu	37	19	7992126	7992126	+	Silent	SNP	G	G	A	rs11542188	byCluster;byFrequency;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7992126	7992126	G	A	SNP	TIMM44	NM_006351	human	genbank	57_37b	-1	validated	silent	c.1305	p.Y435	0.947	HMMPfam_Tim44	HMMPfam_Tim44	-		
TMEM57	55219	genome.wustl.edu	37	1	25783154	25783154	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	25783154	25783154	C	T	SNP	TMEM57	NM_018202	human	genbank	57_37b	+1	validated	missense	c.484	p.P162S	1.000	HMMPfam_Macoilin	HMMPfam_Macoilin,superfamily_Prefoldin	-	no_errors	
TNFSF10	8743	genome.wustl.edu	37	3	172224441	172224441	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	172224441	172224441	A	G	SNP	TNFSF10	NM_003810	human	genbank	57_37b	-1	reviewed	silent	c.687	p.S229	0.300	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF,PatternScan_TNF_1	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578259	7578259	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578259	7578259	A	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.590	p.V197G	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TYRP1	7306	genome.wustl.edu	37	9	12702411	12702414	+	Frame_Shift_Del	DEL	ACAA	ACAA	-	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	ACAA	ACAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	12702411	12702414	ACAA	-	DEL	TYRP1	NM_000550	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1054_1057	p.N353fs	1.000:1.000:0.997:0.999	superfamily_Di-copper_centre,HMMPfam_Tyrosinase	superfamily_Di-copper_centre,HMMPfam_Tyrosinase,PatternScan_TYROSINASE_1,PatternScan_TYROSINASE_2	(deletion:cds_exon[12702271,12702438])	no_errors	
UQCRHL	0	genome.wustl.edu	37	1	16134040	16134040	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16134040	16134040	C	T	SNP	UQCRHL	NM_001089591	human	genbank	57_37b	-1	provisional	silent	c.105	p.E35	0.999	superfamily_Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase),HMMPfam_UCR_hinge	superfamily_Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase),HMMPfam_UCR_hinge	-	no_errors	
VIL1	7429	genome.wustl.edu	37	2	219295614	219295614	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	219295614	219295614	C	T	SNP	VIL1	ENST00000440053	human	ensembl	57_37b	+1	known	missense	c.1115	p.A372V	0.000	NULL	superfamily_SSF55753,HMMSmart_GEL,HMMPfam_Gelsolin	-	no_errors	
ZNF398	57541	genome.wustl.edu	37	7	148848358	148848358	+	Missense_Mutation	SNP	G	G	A	rs917123	byCluster;by1000genomes	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	148848358	148848358	G	A	SNP	ZNF398	ENST00000335901	human	ensembl	57_37b	+1	known	missense	c.23	p.R8Q	0.000	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-		
ZNF778	197320	genome.wustl.edu	37	16	89291996	89291996	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	89291996	89291996	G	A	SNP	ZNF778	NM_182531	human	genbank	57_37b	+1	validated	missense	c.278	p.R93Q	0.004	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZPLD1	131368	genome.wustl.edu	37	3	102171957	102171957	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AQ-A04H-01	TCGA-AQ-A04H-01	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	102171957	102171957	T	G	SNP	ZPLD1	NM_175056	human	genbank	57_37b	+1	provisional	missense	c.349	p.L117V	1.000	HMMPfam_Zona_pellucida,HMMSmart_ZP	HMMPfam_Zona_pellucida,HMMSmart_ZP	-	no_errors	
