Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ACSS1	84532	broad.mit.edu	37	20	25038626	25038633	+	Frame_Shift_Del	DEL	GCCGCCCT	-	-	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	GCCGCCCT	GCCGCCCT	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
AEN	64782	broad.mit.edu	37	15	89169451	89169451	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ATF7	11016	broad.mit.edu	37	12	53917072	53917072	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BRD9	65980	broad.mit.edu	37	5	884087	884087	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
BZW2	28969	broad.mit.edu	37	7	16705118	16705118	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CASP14	23581	broad.mit.edu	37	19	15164766	15164766	+	Nonsense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CHRNE	1145	broad.mit.edu	37	17	4804298	4804298	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CLTC	1213	broad.mit.edu	37	17	57733326	57733327	+	Frame_Shift_Ins	INS	-	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPLX2	10814	broad.mit.edu	37	5	175306952	175306952	+	Silent	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CPZ	8532	broad.mit.edu	37	4	8616161	8616161	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	114448936	114448936	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80136837	80136837	+	Silent	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYP11B2	1585	broad.mit.edu	37	8	143996657	143996657	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
CYTH2	9266	broad.mit.edu	37	19	48977501	48977501	+	Missense_Mutation	SNP	G	A	A	rs1804728	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DLGAP5	9787	broad.mit.edu	37	14	55625310	55625310	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DPY19L1	23333	broad.mit.edu	37	7	34981390	34981390	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102453076	102453076	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102466737	102466737	+	Splice_Site	SNP	G	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
EHD3	30845	broad.mit.edu	37	2	31484489	31484489	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47738988	47738989	+	Missense_Mutation	DNP	CC	AT	AT	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	CC	CC	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
FRMD8	83786	broad.mit.edu	37	11	65164338	65164338	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GCOM1	145781	broad.mit.edu	37	15	57913819	57913819	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GNL3L	54552	broad.mit.edu	37	X	54567804	54567804	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89949043	89949043	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
GUCY2D	3000	broad.mit.edu	37	17	7909785	7909785	+	Silent	SNP	T	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
HOXB3	3213	broad.mit.edu	37	17	46629565	46629565	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ITPKB	3707	broad.mit.edu	37	1	226834969	226834969	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17793714	17793714	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KCNQ2	3785	broad.mit.edu	37	20	62038115	62038115	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KIF3B	9371	broad.mit.edu	37	20	30918079	30918079	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53207418	53207418	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
KRT76	51350	broad.mit.edu	37	12	53162498	53162498	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
LMOD2	442721	broad.mit.edu	37	7	123302309	123302309	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MEF2A	4205	broad.mit.edu	37	15	100252892	100252892	+	Frame_Shift_Del	DEL	A	-	-	rs34851361	byFrequency;by1000genomes	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MFAP3	4238	broad.mit.edu	37	5	153432616	153432616	+	Silent	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MIOS	54468	broad.mit.edu	37	7	7636022	7636022	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
MTAP	4507	broad.mit.edu	37	9	21854722	21854722	+	Silent	SNP	A	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124968161	124968161	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20949987	20949987	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117681127	117681127	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150693876	150693876	+	Silent	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
NOX3	50508	broad.mit.edu	37	6	155764411	155764411	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
OR4D10	390197	broad.mit.edu	37	11	59244964	59244964	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140554161	140554161	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PCNXL3	399909	broad.mit.edu	37	11	65392741	65392741	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PHLPP2	23035	broad.mit.edu	37	16	71682850	71682850	+	Silent	SNP	A	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51935825	51935825	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110441591	110441591	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLA2G6	8398	broad.mit.edu	37	22	38536025	38536025	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEK2	26499	broad.mit.edu	37	14	67862184	67862184	+	Silent	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PLEKHH1	57475	broad.mit.edu	37	14	68029354	68029354	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133219900	133219900	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
PPP1R15B	84919	broad.mit.edu	37	1	204378920	204378920	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RABL2A	11159	broad.mit.edu	37	2	114398532	114398532	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAD50	10111	broad.mit.edu	37	5	131939058	131939058	+	Silent	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RAET1G	353091	broad.mit.edu	37	6	150240312	150240312	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RASGRP2	10235	broad.mit.edu	37	11	64507132	64507132	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22865620	22865620	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNASE9	390443	broad.mit.edu	37	14	21025051	21025051	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RNMTL1	55178	broad.mit.edu	37	17	685793	685793	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPS29	6235	broad.mit.edu	37	14	50053045	50053045	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RPUSD2	27079	broad.mit.edu	37	15	40866017	40866017	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RUSC1	23623	broad.mit.edu	37	1	155300229	155300229	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39051932	39051932	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SARS	6301	broad.mit.edu	37	1	109772058	109772058	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SEMG1	6406	broad.mit.edu	37	20	43836817	43836817	+	Silent	SNP	A	G	G	rs17850164	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164786516	164786516	+	Silent	SNP	C	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC26A11	284129	broad.mit.edu	37	17	78196561	78196561	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLC7A10	56301	broad.mit.edu	37	19	33702235	33702235	+	Splice_Site	SNP	C	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SLCO6A1	133482	broad.mit.edu	37	5	101724472	101724472	+	Missense_Mutation	SNP	C	A	A	rs72779942	by1000genomes	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SMC3	9126	broad.mit.edu	37	10	112356197	112356197	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SRCIN1	80725	broad.mit.edu	37	17	36708271	36708271	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152711518	152711518	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85447027	85447027	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
THRAP3	9967	broad.mit.edu	37	1	36755101	36755101	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63030443	63030443	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
TRHDE	29953	broad.mit.edu	37	12	73056887	73056887	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UGT1A10	54575	broad.mit.edu	37	2	234545342	234545342	+	Silent	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
UTP18	51096	broad.mit.edu	37	17	49340732	49340732	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	A	A	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VHL	7428	broad.mit.edu	37	3	10188268	10188269	+	Frame_Shift_Ins	INS	-	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	-	-	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100887766	100887766	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XPC	7508	broad.mit.edu	37	3	14200007	14200007	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
XPOT	11260	broad.mit.edu	37	12	64827305	64827305	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZBTB41	360023	broad.mit.edu	37	1	197168567	197168567	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	T	T	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35836039	35836039	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35836041	35836041	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	G	G	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
ZNF107	51427	broad.mit.edu	37	7	64167663	64167663	+	Silent	SNP	C	A	A	novel	unknown	TCGA-AS-3778-01	TCGA-AS-3778-01	C	C	.	.	.	.	Unknown	Unknown	Somatic	Phase_I	Unspecified	.	.	.	Illumina GAIIx
